PDB: 26618 resultsInfo pagesStatus searchChemie searchBIRD

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5ZHP	M3 muscarinic acetylcholine receptor in complex with a selective antagonist Descriptor: (1R,2R,4S,5S,7s)-7-({[4-fluoro-2-(thiophen-2-yl)phenyl]carbamoyl}oxy)-9,9-dimethyl-3-oxa-9-azatricyclo[3.3.1.0~2,4~]nonan-9-ium, CITRIC ACID, HEXAETHYLENE GLYCOL, ... Authors: Liu, H, Hofmann, J, Fish, I, Schaake, B, Eitel, K, Bartuschat, A, Kaindl, J, Rampp, H, Banerjee, A, Hubner, H, Clark, M.J, Vincent, S.G, Fisher, J, Heinrich, M, Hirata, K, Liu, X, Sunahara, R.K, Shoichet, B.K, Kobilka, B.K, Gmeiner, P. Deposit date: 2018-03-13 Release date: 2018-11-28 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Structure-guided development of selective M3 muscarinic acetylcholine receptor antagonists Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6QGW	Crystal structure of E.coli BamA beta-barrel in complex with nanobody E6 Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, NanoE6, Outer membrane protein assembly factor BamA Authors: Hartmann, J.-B, Kaur, H, Jakob, R.P, Zahn, M, Zimmermann, I, Seeger, M, Maier, T, Hiller, S. Deposit date: 2019-01-14 Release date: 2019-06-26 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.938 Å) Cite: Identification of conformation-selective nanobodies against the membrane protein insertase BamA by an integrated structural biology approach. J.Biomol.Nmr, 73, 2019
5ZI7	Crystal structure of Legionella pneumophila aminopeptidase A in complex with glutamic acid Descriptor: Aminopeptidase N, GLUTAMIC ACID Authors: Marapaka, A.K, Addlagatta, A. Deposit date: 2018-03-14 Release date: 2018-09-19 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (1.86 Å) Cite: Discovery, Structural and Biochemical Studies of a rare Glu/Asp Specific M1 Class Aminopeptidase from Legionella pneumophila Int. J. Biol. Macromol., 120, 2018
6QHQ	Time resolved structural analysis of the full turnover of an enzyme - 1128 ms Descriptor: Fluoroacetate dehalogenase, fluoroacetic acid Authors: Schulz, E.C, Mehrabi, P, Pai, E.F, Miller, D. Deposit date: 2019-01-17 Release date: 2019-09-25 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.735 Å) Cite: Time-resolved crystallography reveals allosteric communication aligned with molecular breathing. Science, 365, 2019
6QHW	Time resolved structural analysis of the full turnover of an enzyme - 4512 ms Descriptor: Fluoroacetate dehalogenase, GLYCOLIC ACID, fluoroacetic acid Authors: Schulz, E.C, Mehrabi, P, Pai, E.F, Miller, D. Deposit date: 2019-01-17 Release date: 2019-09-25 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.718 Å) Cite: Time-resolved crystallography reveals allosteric communication aligned with molecular breathing. Science, 365, 2019
5ZOA	The crystal structure of a Thermobifida fusca cutinase Descriptor: BTA-hydrolase 1, CHLORIDE ION Authors: Dong, Q.L, Wu, L, Wu, J, Zhou, J.H. Deposit date: 2018-04-12 Release date: 2019-04-17 Last modified: 2024-03-27 Method: X-RAY DIFFRACTION (1.537 Å) Cite: The crystal structure of a cutinase from Thermobifida fusca To Be Published
5F1Q	Crystal Structure of Periplasmic Dipeptide Transport Protein from Yersinia pestis Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ... Authors: Kim, Y, Zhou, M, Shatsman, S, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID) Deposit date: 2015-11-30 Release date: 2015-12-23 Last modified: 2019-11-27 Method: X-RAY DIFFRACTION (1.956 Å) Cite: Crystal Structure of Periplasmic Dipeptide Transport Protein from Yersinia pestis To Be Published
8E9N	Crystal structure of E. coli aspartate aminotransferase mutant VFIY in the ligand-free form at 278 K Descriptor: Aspartate aminotransferase, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION Authors: Chica, R.A, St-Jacques, A.D, Rodriguez, J.M, Thompson, M.C. Deposit date: 2022-08-26 Release date: 2022-10-05 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.88 Å) Cite: Computational remodeling of an enzyme conformational landscape for altered substrate selectivity. Nat Commun, 14, 2023
5F5B	Structure of E.Coli GlpG complexed with peptidic inhibitor Ac-VRMA-CHO Descriptor: Rhomboid protease GlpG, peptidic derivative of Gurken: ACE-VAL-ARG-MET-ALA-aldehyde Authors: Urban, S, Cho, S, Dickey, S.W. Deposit date: 2015-12-04 Release date: 2016-02-17 Last modified: 2024-07-10 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Crystal Structures and Inhibition Kinetics Reveal a Two-Stage Catalytic Mechanism with Drug Design Implications for Rhomboid Proteolysis. Mol.Cell, 61, 2016
8E9M	Crystal structure of E. coli aspartate aminotransferase mutant VFIT bound to maleic acid at 278 K Descriptor: Aspartate aminotransferase, MALEIC ACID, PYRIDOXAL-5'-PHOSPHATE Authors: Chica, R.A, St-Jacques, A.D, Rodriguez, J.M, Thompson, M.C. Deposit date: 2022-08-26 Release date: 2022-10-05 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.76 Å) Cite: Computational remodeling of an enzyme conformational landscape for altered substrate selectivity. Nat Commun, 14, 2023
5F5D	Crystal structures and Inhibition kinetics reveal a two-state catalytic mechanism with drug design implications for rhomboid proteolysis Descriptor: Rhomboid protease GlpG Authors: Urban, S, Cho, S, Dickey, S.W. Deposit date: 2015-12-04 Release date: 2016-02-24 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Crystal Structures and Inhibition Kinetics Reveal a Two-Stage Catalytic Mechanism with Drug Design Implications for Rhomboid Proteolysis. Mol.Cell, 61, 2016
5F5G	Structure of E.Coli GlpG Y205F mutant complexed with peptidic inhibitor Ac-RMA-CHO in the DMPC/CHAPSO bicelle Descriptor: ACE-ARG-MET-ALA-aldehyde, Rhomboid protease GlpG Authors: Urban, S, Cho, S, Dickey, S.W. Deposit date: 2015-12-04 Release date: 2016-04-06 Last modified: 2024-07-10 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Crystal Structures and Inhibition Kinetics Reveal a Two-Stage Catalytic Mechanism with Drug Design Implications for Rhomboid Proteolysis. Mol.Cell, 61, 2016
8E9R	Crystal structure of E. coli aspartate aminotransferase mutant VFCS in the ligand-free form at 278 K Descriptor: Aspartate aminotransferase, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION Authors: Chica, R.A, St-Jacques, A.D, Rodriguez, J.M, Thompson, M.C. Deposit date: 2022-08-26 Release date: 2022-10-05 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Computational remodeling of an enzyme conformational landscape for altered substrate selectivity. Nat Commun, 14, 2023
6Q97	Structure of tmRNA SmpB bound in A site of E. coli 70S ribosome Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Rae, C.D. Deposit date: 2018-12-17 Release date: 2019-03-13 Last modified: 2024-04-24 Method: ELECTRON MICROSCOPY (3.9 Å) Cite: How a circularized tmRNA moves through the ribosome. Science, 363, 2019
8E9L	Crystal structure of E. coli aspartate aminotransferase mutant VFIT in the ligand-free form at 278 K Descriptor: Aspartate aminotransferase, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION Authors: Chica, R.A, St-Jacques, A.D, Rodriguez, J.M, Thompson, M.C. Deposit date: 2022-08-26 Release date: 2022-10-05 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.31 Å) Cite: Computational remodeling of an enzyme conformational landscape for altered substrate selectivity. Nat Commun, 14, 2023
6QGC	PETase from Ideonella sakaiensis without ligand Descriptor: CHLORIDE ION, Poly(ethylene terephthalate) hydrolase, SULFATE ION Authors: Palm, G.J, Reisky, L, Boettcher, D, Mueller, H, Michels, E.A.P, Walczak, C, Berndt, L, Weiss, M.S, Bornscheuer, U.T, Weber, G. Deposit date: 2019-01-10 Release date: 2019-04-03 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2 Å) Cite: Structure of the plastic-degrading Ideonella sakaiensis MHETase bound to a substrate. Nat Commun, 10, 2019
8E9O	Crystal structure of E. coli aspartate aminotransferase mutant VFIY bound to maleic acid at 278 K Descriptor: Aspartate aminotransferase, MALEIC ACID, PYRIDOXAL-5'-PHOSPHATE Authors: Chica, R.A, St-Jacques, A.D, Rodriguez, J.M, Thompson, M.C. Deposit date: 2022-08-26 Release date: 2022-10-05 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.96 Å) Cite: Computational remodeling of an enzyme conformational landscape for altered substrate selectivity. Nat Commun, 14, 2023
5ZK7	Stapled-peptides tailored against initiation of translation Descriptor: 7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE, ACE-ARG-TYR-SER-ARG-MK8-GLN-LEU-LEU-MK8-LEU-PHE-ARG-NH2, CHLORIDE ION, ... Authors: Lama, D, Liberator, A, Frosi, Y, Nakhle, J, Tsomia, N, Bashir, T, Lane, D.P, Brown, C.J, Verma, C.S, Auvin, S, Ciesielski, F, Uhring, M. Deposit date: 2018-03-23 Release date: 2019-02-20 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.12 Å) Cite: Structural insights reveal a recognition feature for tailoring hydrocarbon stapled-peptides against the eukaryotic translation initiation factor 4E protein. Chem Sci, 10, 2019
8E9T	Crystal structure of wild-type E. coli aspartate aminotransferase in the ligand-free form at 303 K Descriptor: Aspartate aminotransferase, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION Authors: Chica, R.A, St-Jacques, A.D, Rodriguez, J.M, Thompson, M.C. Deposit date: 2022-08-26 Release date: 2022-10-05 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.13 Å) Cite: Computational remodeling of an enzyme conformational landscape for altered substrate selectivity. Nat Commun, 14, 2023
8E9K	Crystal structure of wild-type E. coli aspartate aminotransferase bound to maleate at 278 K Descriptor: Aspartate aminotransferase, MALEIC ACID, PYRIDOXAL-5'-PHOSPHATE Authors: Chica, R.A, St-Jacques, A.D, Rodriguez, J.M, Thompson, M.C. Deposit date: 2022-08-26 Release date: 2022-10-05 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.83 Å) Cite: Computational remodeling of an enzyme conformational landscape for altered substrate selectivity. Nat Commun, 14, 2023
8E9S	Crystal structure of E. coli aspartate aminotransferase mutant VFCS bound to maleic acid at 278 K Descriptor: Aspartate aminotransferase, MALEIC ACID, PYRIDOXAL-5'-PHOSPHATE Authors: Chica, R.A, St-Jacques, A.D, Rodriguez, J.M, Thompson, M.C. Deposit date: 2022-08-26 Release date: 2022-10-05 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2 Å) Cite: Computational remodeling of an enzyme conformational landscape for altered substrate selectivity. Nat Commun, 14, 2023
8E9Q	Crystal structure of E. coli aspartate aminotransferase mutant HEX bound to maleic acid at 278 K Descriptor: Aspartate aminotransferase, MALEIC ACID, PYRIDOXAL-5'-PHOSPHATE Authors: Chica, R.A, St-Jacques, A.D, Rodriguez, J.M, Thompson, M.C. Deposit date: 2022-08-26 Release date: 2022-10-05 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Computational remodeling of an enzyme conformational landscape for altered substrate selectivity. Nat Commun, 14, 2023
8E7M	Structure of the human ACE2 receptor in complex with antibody Fab fragment, 05B04 Descriptor: 05B04 Heavy Chain, 05B04 Light Chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Barnes, C.O. Deposit date: 2022-08-24 Release date: 2022-09-28 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: Human anti-ACE2 monoclonal antibodies as pan-sarbecovirus prophylactic agents Biorxiv, 2022
5ZML	Stapled-peptides tailored against initiation of translation Descriptor: 1,2-ETHANEDIOL, ACE-LYS-LYS-ARG-TYR-SER-ARG-MK8-GLN-LEU-LEU-MK8-PHE-ARG-ARG, Eukaryotic translation initiation factor 4E, ... Authors: Lama, D, Liberator, A, Frosi, Y, Nakhle, J, Tsomia, N, Bashir, T, Lane, D.P, Brown, C.J, Verma, C.S, Auvin, S, Yano, J. Deposit date: 2018-04-04 Release date: 2019-02-20 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structural insights reveal a recognition feature for tailoring hydrocarbon stapled-peptides against the eukaryotic translation initiation factor 4E protein. Chem Sci, 10, 2019
8E9V	Crystal structure of E. coli aspartate aminotransferase mutant VFIT in the ligand-free form at 303 K Descriptor: Aspartate aminotransferase, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION Authors: Chica, R.A, St-Jacques, A.D, Rodriguez, J.M, Thompson, M.C. Deposit date: 2022-08-26 Release date: 2022-10-05 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.01 Å) Cite: Computational remodeling of an enzyme conformational landscape for altered substrate selectivity. Nat Commun, 14, 2023

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