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2ORH
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BU of 2orh by Molmil
Directing Macromolecular Conformation Through Halogen Bonds
Descriptor: DNA (5'-D(*CP*CP*GP*AP*TP*AP*CP*CP*GP*G)-3'), DNA (5'-D(*CP*CP*GP*GP*TP*AP*(DU)P*CP*GP*G)-3'), SODIUM ION
Authors:Voth, A.R, Hays, F.A, Ho, P.S.
Deposit date:2007-02-02
Release date:2007-03-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Directing macromolecular conformation through halogen bonds.
Proc.Natl.Acad.Sci.Usa, 104, 2007
2ORF
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BU of 2orf by Molmil
Directing Macromolecular Conformation Through Halogen Bonds
Descriptor: DNA (5'-D(*CP*CP*GP*AP*TP*AP*CP*CP*GP*G)-3'), DNA (5'-D(*CP*CP*GP*GP*TP*AP*(BRU)P*CP*GP*G)-3'), SODIUM ION
Authors:Voth, A.R, Hays, F.A, Ho, P.S.
Deposit date:2007-02-02
Release date:2007-03-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Directing macromolecular conformation through halogen bonds.
Proc.Natl.Acad.Sci.Usa, 104, 2007
7M1X
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BU of 7m1x by Molmil
Cryo-EM Structure of Nucleosome containing mouse histone variant H2A.Z
Descriptor: DNA (136-MER), Histone H2A.Z, Histone H2B 1.1, ...
Authors:Tan, D, Lewis, T.
Deposit date:2021-03-15
Release date:2021-09-29
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural basis of chromatin regulation by histone variant H2A.Z.
Nucleic Acids Res., 49, 2021
192D
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BU of 192d by Molmil
RECOMBINATION-LIKE STRUCTURE OF D(CCGCGG)
Descriptor: DNA (5'-D(*CP*CP*GP*CP*GP*G)-3'), SODIUM ION
Authors:Malinina, L, Urpi, L, Salas, X, Huynh-Dinh, T, Subirana, J.A.
Deposit date:1994-09-22
Release date:1995-02-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Recombination-like structure of d(CCGCGG).
J.Mol.Biol., 243, 1994
1B97
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BU of 1b97 by Molmil
ANALYSIS OF A MUTATIONAL HOT-SPOT IN THE ECORV RESTRICTION ENDONUCLEASE: A CATALYTIC ROLE FOR A MAIN CHAIN CARBONYL GROUP
Descriptor: DNA (5'-D(*AP*AP*AP*GP*AP*TP*AP*TP*CP*TP*T)-3'), RESTRICTION ENDONUCLEASE ECORV
Authors:Thomas, M.P, Halford, S.E, Brady, R.L.
Deposit date:1999-02-19
Release date:1999-02-26
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural analysis of a mutational hot-spot in the EcoRV restriction endonuclease: a catalytic role for a main chain carbonyl group.
Nucleic Acids Res., 27, 1999
6BUZ
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BU of 6buz by Molmil
Cryo-EM structure of CENP-A nucleosome in complex with kinetochore protein CENP-N
Descriptor: DNA (147-MER), Histone H2A, Histone H2B, ...
Authors:Chittori, S, Hong, J, Kelly, A.E, Bai, Y, Subramaniam, S.
Deposit date:2017-12-11
Release date:2017-12-20
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.92 Å)
Cite:Structural mechanisms of centromeric nucleosome recognition by the kinetochore protein CENP-N.
Science, 359, 2018
2ORG
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BU of 2org by Molmil
Directing Macromolecular Conformation Through Halogen Bonds
Descriptor: DNA (5'-D(*CP*CP*GP*AP*TP*AP*CP*CP*GP*G)-3'), DNA (5'-D(*CP*CP*GP*GP*TP*AP*(BRU)P*CP*GP*G)-3')
Authors:Voth, A.R, Hays, F.A, Ho, P.S.
Deposit date:2007-02-02
Release date:2007-03-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Directing macromolecular conformation through halogen bonds.
Proc.Natl.Acad.Sci.Usa, 104, 2007
5WV7
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BU of 5wv7 by Molmil
Crystal structure of d(CCGGGGTACCCCGG)2 at 1.4A resolution
Descriptor: DNA (5'-D(*CP*CP*GP*GP*GP*GP*TP*AP*CP*CP*CP*CP*GP*G)-3')
Authors:Karthik, S, Thirugnanasambandam, A, Mandal, P.K, Gautham, N.
Deposit date:2016-12-22
Release date:2017-05-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.406 Å)
Cite:Crystal structure of d(CCGGGGTACCCCGG)2 at 1.4 angstrom resolution.
Acta Crystallogr F Struct Biol Commun, 73, 2017
8AMD
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BU of 8amd by Molmil
Cryo-EM structure of the RecA presynaptic filament from S.pneumoniae
Descriptor: DNA, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Protein RecA
Authors:Perry, T.N, Fronzes, R, Polard, P, Hertzog, M.
Deposit date:2022-08-03
Release date:2023-03-22
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Assembly mechanism and cryoEM structure of RecA recombination nucleofilaments from Streptococcus pneumoniae.
Nucleic Acids Res., 51, 2023
7R6T
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BU of 7r6t by Molmil
Human EXOG complexed with dRP-containing DNA
Descriptor: DNA (5'-D(*CP*GP*CP*AP*CP*GP*TP*CP*AP*GP*A)-3'), DNA (5'-D(3DR)P*CP*TP*GP*AP*CP*GP*TP*GP*C)-3'), MAGNESIUM ION, ...
Authors:Szymanski, M.R, Yin, Y.W.
Deposit date:2021-06-23
Release date:2022-08-24
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Human EXOG possesses strong AP hydrolysis activity
To Be Published
7R6V
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BU of 7r6v by Molmil
Human EXOG complexed with dRP-containing DNA
Descriptor: DNA (5'-D(*CP*GP*CP*AP*CP*GP*TP*CP*AP*GP*AP*A)-3'), DNA (5'-D(*CP*TP*GP*AP*CP*GP*TP*GP*CP*G)-3'), MAGNESIUM ION, ...
Authors:Szymanski, M.R, Yin, Y.W.
Deposit date:2021-06-23
Release date:2022-08-24
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Human EXOG possesses strong AP hydrolysis activity
To Be Published
8AMF
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BU of 8amf by Molmil
Cryo-EM structure of the RecA postsynaptic filament from S. pneumoniae
Descriptor: DNA, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Protein RecA
Authors:Perry, T.N, Fronzes, R, Polard, P, Hertzog, M.
Deposit date:2022-08-03
Release date:2024-02-21
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Assembly mechanism and cryoEM structure of RecA recombination nucleofilaments from Streptococcus pneumoniae.
Nucleic Acids Res., 51, 2023
3QFQ
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BU of 3qfq by Molmil
Asymmetric Assembly of Merkel Cell Polyomavirus Large T-antigen Origin Binding Domains at the Viral Origin
Descriptor: DNA (26-MER), Large T antigen
Authors:Harrison, C.J, Meinke, G, Bohm, A.
Deposit date:2011-01-22
Release date:2011-04-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.9001 Å)
Cite:Asymmetric assembly of merkel cell polyomavirus large T-antigen origin binding domains at the viral origin.
J.Mol.Biol., 409, 2011
8EIH
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BU of 8eih by Molmil
Cryo-EM structure of human DNMT3B homo-tetramer (form I)
Descriptor: DNA (cytosine-5)-methyltransferase 3B, S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION
Authors:Lu, J.W, Song, J.K.
Deposit date:2022-09-15
Release date:2023-09-20
Last modified:2024-04-03
Method:ELECTRON MICROSCOPY (3.04 Å)
Cite:Structural basis for the allosteric regulation and dynamic assembly of DNMT3B.
Nucleic Acids Res., 51, 2023
8EII
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BU of 8eii by Molmil
Cryo-EM structure of human DNMT3B homo-tetramer (form II)
Descriptor: DNA (cytosine-5)-methyltransferase 3B, S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION
Authors:Lu, J.W, Song, J.K.
Deposit date:2022-09-15
Release date:2023-09-20
Last modified:2023-12-20
Method:ELECTRON MICROSCOPY (3.12 Å)
Cite:Structural basis for the allosteric regulation and dynamic assembly of DNMT3B.
Nucleic Acids Res., 51, 2023
8EIK
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BU of 8eik by Molmil
Cryo-EM structure of human DNMT3B homo-hexamer
Descriptor: DNA (cytosine-5)-methyltransferase 3B, S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION
Authors:Lu, J.W, Song, J.K.
Deposit date:2022-09-15
Release date:2023-09-20
Last modified:2023-12-20
Method:ELECTRON MICROSCOPY (3.19 Å)
Cite:Structural basis for the allosteric regulation and dynamic assembly of DNMT3B.
Nucleic Acids Res., 51, 2023
8EIJ
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BU of 8eij by Molmil
Cryo-EM structure of human DNMT3B homo-trimer
Descriptor: DNA (cytosine-5)-methyltransferase 3B, S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION
Authors:Lu, J.W, Song, J.K.
Deposit date:2022-09-15
Release date:2023-09-20
Last modified:2023-12-20
Method:ELECTRON MICROSCOPY (3.34 Å)
Cite:Structural basis for the allosteric regulation and dynamic assembly of DNMT3B.
Nucleic Acids Res., 51, 2023
4JNE
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BU of 4jne by Molmil
Allosteric opening of the polypeptide-binding site when an Hsp70 binds ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, Hsp70 CHAPERONE DnaK, ...
Authors:Qi, R, Sarbeng, E.B, Liu, Q, Le, K.Q, Xu, X, Xu, H, Yang, J, Wong, J.L, Vorvis, C, Hendrickson, W.A, Zhou, L, Liu, Q.
Deposit date:2013-03-15
Release date:2013-05-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Allosteric opening of the polypeptide-binding site when an Hsp70 binds ATP.
Nat.Struct.Mol.Biol., 20, 2013
8OOA
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BU of 8ooa by Molmil
CryoEM Structure INO80core Hexasome complex Hexasome refinement state1
Descriptor: DNA Strand 2, DNA strand 1, Histone H2A, ...
Authors:Zhang, M, Jungblut, A, Hoffmann, T, Eustermann, S.
Deposit date:2023-04-04
Release date:2023-07-26
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.18 Å)
Cite:Hexasome-INO80 complex reveals structural basis of noncanonical nucleosome remodeling.
Science, 381, 2023
7C36
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BU of 7c36 by Molmil
c-Myc DNA binding protein structure
Descriptor: RNA-binding motif, single-stranded-interacting protein 1
Authors:Aggarwal, P, Bhavesh, N.S.
Deposit date:2020-05-11
Release date:2021-05-12
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Hinge like domain motion facilitates human RBMS1 protein binding to proto-oncogene c-myc promoter.
Nucleic Acids Res., 49, 2021
1CR1
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BU of 1cr1 by Molmil
CRYSTAL STRUCTURE OF THE HELICASE DOMAIN OF THE GENE 4 PROTEIN OF BACTERIOPHAGE T7: COMPLEX WITH DTTP
Descriptor: DNA PRIMASE/HELICASE, SULFATE ION, THYMIDINE-5'-TRIPHOSPHATE
Authors:Sawaya, M.R, Guo, S, Tabor, S, Richardson, C.C, Ellenberger, T.
Deposit date:1999-08-12
Release date:1999-11-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the helicase domain from the replicative helicase-primase of bacteriophage T7.
Cell(Cambridge,Mass.), 99, 1999
1CR4
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BU of 1cr4 by Molmil
CRYSTAL STRUCTURE OF THE HELICASE DOMAIN OF THE GENE 4 PROTEIN OF BACTERIOPHAGE T7: COMPLEX WITH DTDP
Descriptor: DNA PRIMASE/HELICASE, SULFATE ION, THYMIDINE-5'-DIPHOSPHATE
Authors:Sawaya, M.R, Guo, S, Tabor, S, Richardson, C.C, Ellenberger, T.
Deposit date:1999-08-12
Release date:1999-11-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the helicase domain from the replicative helicase-primase of bacteriophage T7.
Cell(Cambridge,Mass.), 99, 1999
7V90
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BU of 7v90 by Molmil
Telomeric mononucleosome
Descriptor: DNA (145-mer), Histone H2A type 1-B/E, Histone H2B type 1-K, ...
Authors:Soman, A.
Deposit date:2021-08-24
Release date:2022-07-27
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Columnar structure of human telomeric chromatin.
Nature, 609, 2022
7VA4
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BU of 7va4 by Molmil
Telomeric tetranucleosome in open state
Descriptor: DNA (539-MER), Histone H2A type 1-B/E, Histone H2B type 1-K, ...
Authors:Soman, A.
Deposit date:2021-08-27
Release date:2022-07-27
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (14 Å)
Cite:Columnar structure of human telomeric chromatin.
Nature, 609, 2022
7V9J
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BU of 7v9j by Molmil
Telomeric trinucleosome
Descriptor: DNA (408-mer), Histone H2A type 1-B/E, Histone H2B type 1-K, ...
Authors:Soman, A.
Deposit date:2021-08-25
Release date:2022-07-27
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (8 Å)
Cite:Columnar structure of human telomeric chromatin.
Nature, 609, 2022

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