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5OFV
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BU of 5ofv by Molmil
Crystal structure of human 3-phosphoglycerate dehydrogenase in complex with 5-fluoro-2-methylbenzoic acid
Descriptor: 5-fluoranyl-2-methyl-benzoic acid, D-3-phosphoglycerate dehydrogenase
Authors:Unterlass, J.E, Basle, A, Blackburn, T.J, Tucker, J, Cano, C, Noble, M.E.M, Curtin, N.J.
Deposit date:2017-07-11
Release date:2017-08-16
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Validating and enabling phosphoglycerate dehydrogenase (PHGDH) as a target for fragment-based drug discovery in PHGDH-amplified breast cancer.
Oncotarget, 9, 2018
5OFM
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BU of 5ofm by Molmil
Crystal structure of human 3-phosphoglycerate dehydrogenase in complex with 5-amino-1-methyl-1H-indole
Descriptor: 1-methylindol-5-amine, D-3-phosphoglycerate dehydrogenase
Authors:Unterlass, J.E, Basle, A, Blackburn, T.J, Tucker, J, Cano, C, Noble, M.E.M, Curtin, N.J.
Deposit date:2017-07-11
Release date:2017-08-16
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of human 3-phosphoglycerate dehydrogenase in complex with 5-amino-1-methyl-1H-indole
To be published
6IH3
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BU of 6ih3 by Molmil
Crystal structure of Phosphite Dehydrogenase from Ralstonia sp. 4506 in complex with non-natural cofactor Nicotinamide Cytosine Dinucleotide
Descriptor: Phosphite dehydrogenase, [[(2S,3S,4R,5S)-5-(3-aminocarbonylpyridin-1-ium-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2S,3S,4R,5S)-5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
Authors:Song, X, Feng, Y, Zhao, Z, Liu, Y.
Deposit date:2018-09-28
Release date:2019-03-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.942 Å)
Cite:Structural Insights into Phosphite Dehydrogenase Variants Favoring a Non-natural Redox Cofactor
Acs Catalysis, 9, 2019
6IH8
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BU of 6ih8 by Molmil
Crystal structure of Phosphite Dehydrogenase mutant I151R/P176R/M207A from Ralstonia sp. 4506
Descriptor: Phosphite dehydrogenase
Authors:Song, X, Feng, Y, Liu, Y, Zhao, Z.
Deposit date:2018-09-28
Release date:2019-03-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural Insights into Phosphite Dehydrogenase Variants Favoring a Non-natural Redox Cofactor
Acs Catalysis, 9, 2019
5NZO
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BU of 5nzo by Molmil
Crystal structure of human 3-phosphoglycerate dehydrogenase in complex with 1-methyl-3-phenyl-1H-pyrazol-5-amine
Descriptor: 2-methyl-5-phenyl-pyrazol-3-amine, D-3-phosphoglycerate dehydrogenase
Authors:Unterlass, J.E, Basle, A, Blackburn, T.J, Tucker, J, Cano, C, Noble, M.E.M, Curtin, N.J.
Deposit date:2017-05-14
Release date:2017-06-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Validating and enabling phosphoglycerate dehydrogenase (PHGDH) as a target for fragment-based drug discovery in PHGDH-amplified breast cancer.
Oncotarget, 9, 2018
6IH6
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BU of 6ih6 by Molmil
Phosphite Dehydrogenase mutant I151R/P176R/M207A from Ralstonia sp. 4506 in complex with non-natural cofactor Nicotinamide Cytosine dinucleotide
Descriptor: Phosphite dehydrogenase, [[(2S,3S,4R,5S)-5-(3-aminocarbonylpyridin-1-ium-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2S,3S,4R,5S)-5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
Authors:Song, X, Feng, Y, Liu, Y, Zhao, Z.
Deposit date:2018-09-28
Release date:2019-03-13
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.491 Å)
Cite:Structural Insights into Phosphite Dehydrogenase Variants Favoring a Non-natural Redox Cofactor
Acs Catalysis, 9, 2019
3DC2
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BU of 3dc2 by Molmil
Crystal structure of serine bound D-3-phosphoglycerate dehydrogenase from Mycobacterium tuberculosis
Descriptor: D-3-phosphoglycerate dehydrogenase, L(+)-TARTARIC ACID, SERINE
Authors:Dey, S, Sacchettini, J.C.
Deposit date:2008-06-03
Release date:2008-07-22
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural analysis of substrate and effector binding in Mycobacterium tuberculosis D-3-phosphoglycerate dehydrogenase
Biochemistry, 47, 2008
3DDN
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BU of 3ddn by Molmil
Crystal structure of hydroxypyruvic acid phosphate bound D-3-phosphoglycerate dehydrogenase in mycobacterium tuberculosis
Descriptor: 2-oxo-3-(phosphonooxy)propanoic acid, D-3-phosphoglycerate dehydrogenase, L(+)-TARTARIC ACID
Authors:Dey, S, Sacchettini, J.C.
Deposit date:2008-06-05
Release date:2008-07-22
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural analysis of substrate and effector binding in Mycobacterium tuberculosis D-3-phosphoglycerate dehydrogenase
Biochemistry, 47, 2008
3FN4
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BU of 3fn4 by Molmil
Apo-form of NAD-dependent formate dehydrogenase from bacterium Moraxella sp.C-1 in closed conformation
Descriptor: GLYCEROL, NAD-dependent formate dehydrogenase, SULFATE ION
Authors:Shabalin, I.G, Polyakov, K.M, Filippova, E.V, Dorovatovskiy, P.V, Tikhonova, T.V, Sadykhov, E.G, Tishkov, V.I, Popov, V.O.
Deposit date:2008-12-23
Release date:2009-12-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structures of the apo and holo forms of formate dehydrogenase from the bacterium Moraxella sp. C-1: towards understanding the mechanism of the closure of the interdomain cleft
Acta Crystallogr.,Sect.D, 65, 2009
4LCJ
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BU of 4lcj by Molmil
CtBP2 in complex with substrate MTOB
Descriptor: 4-(METHYLSULFANYL)-2-OXOBUTANOIC ACID, C-terminal-binding protein 2, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Hilbert, B.J, Schiffer, C.A, Royer Jr, W.E.
Deposit date:2013-06-21
Release date:2014-03-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:Crystal structures of human CtBP in complex with substrate MTOB reveal active site features useful for inhibitor design.
Febs Lett., 588, 2014
3EVT
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BU of 3evt by Molmil
Crystal structure of phosphoglycerate dehydrogenase from Lactobacillus plantarum
Descriptor: Phosphoglycerate dehydrogenase
Authors:Bonanno, J.B, Gilmore, M, Bain, K.T, Do, J, Sampathkumar, P, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-10-13
Release date:2008-10-21
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of phosphoglycerate dehydrogenase from Lactobacillus plantarum
To be Published
4LCE
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BU of 4lce by Molmil
CtBP1 in complex with substrate MTOB
Descriptor: 4-(METHYLSULFANYL)-2-OXOBUTANOIC ACID, C-terminal-binding protein 1, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Hilbert, B.J, Schiffer, C.A, Royer Jr, W.E.
Deposit date:2013-06-21
Release date:2014-03-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Crystal structures of human CtBP in complex with substrate MTOB reveal active site features useful for inhibitor design.
Febs Lett., 588, 2014
4NJM
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BU of 4njm by Molmil
Crystal Structure of phosphoglycerate bound 3-phosphoglycerate dehydrogenase in Entamoeba histolytica
Descriptor: 3-PHOSPHOGLYCERIC ACID, D-3-phosphoglycerate dehydrogenase, putative
Authors:Singh, R.K, Gourinath, S.
Deposit date:2013-11-11
Release date:2014-10-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Crystal structures and kinetics of Type III 3-phosphoglycerate dehydrogenase reveal catalysis by lysine.
Febs J., 281, 2014
4NJO
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BU of 4njo by Molmil
crystal structure of cofactor(NAD+) bound 3-phosphoglycerate dehydrogenase in Entamoeba histolytica
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, D-3-phosphoglycerate dehydrogenase, putative, ...
Authors:Singh, R.K, Gourinath, S.
Deposit date:2013-11-11
Release date:2014-10-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Crystal structures and kinetics of Type III 3-phosphoglycerate dehydrogenase reveal catalysis by lysine.
Febs J., 281, 2014
4NU5
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BU of 4nu5 by Molmil
Crystal Structure of PTDH R301A
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Phosphonate dehydrogenase
Authors:Nair, S.K, Chekan, J.R.
Deposit date:2013-12-03
Release date:2014-03-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Chemical rescue and inhibition studies to determine the role of arg301 in phosphite dehydrogenase.
Plos One, 9, 2014
3GA0
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BU of 3ga0 by Molmil
CtBP1/BARS Gly172->Glu mutant structure: impairing NAD(H) binding and dimerization
Descriptor: C-terminal-binding protein 1, FORMIC ACID
Authors:Nardini, M, Valente, C, Ricagno, S, Luini, A, Corda, D, Bolognesi, M.
Deposit date:2009-02-16
Release date:2009-04-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:CtBP1/BARS Gly172-->Glu mutant structure: impairing NAD(H)-binding and dimerization
Biochem.Biophys.Res.Commun., 381, 2009
4NFY
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BU of 4nfy by Molmil
Crystal Structure of 3-phosphoglycerate Dehydrogenase from Entamoeba histolytica
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, D-3-phosphoglycerate dehydrogenase, putative
Authors:Singh, R.K, Gourinath, S.
Deposit date:2013-11-01
Release date:2014-10-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal structures and kinetics of Type III 3-phosphoglycerate dehydrogenase reveal catalysis by lysine.
Febs J., 281, 2014
3GG9
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BU of 3gg9 by Molmil
CRYSTAL STRUCTURE OF putative D-3-phosphoglycerate dehydrogenase oxidoreductase from Ralstonia solanacearum
Descriptor: CHLORIDE ION, GLYCEROL, SULFATE ION, ...
Authors:Patskovsky, Y, Ramagopal, U, Toro, R, Morano, C, Freeman, J, Chang, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-02-27
Release date:2009-03-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of Putative D-3-Phosphoglycerate Dehydrogenase from Ralstonia Solanacearum
To be Published
4NU6
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BU of 4nu6 by Molmil
Crystal Structure of PTDH R301K
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Phosphonate dehydrogenase, SULFATE ION
Authors:Nair, S.K, Chekan, J.R.
Deposit date:2013-12-03
Release date:2014-03-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Chemical rescue and inhibition studies to determine the role of arg301 in phosphite dehydrogenase.
Plos One, 9, 2014
3GVX
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BU of 3gvx by Molmil
Crystal structure of Glycerate dehydrogenase related protein from Thermoplasma acidophilum
Descriptor: Glycerate dehydrogenase related protein, POTASSIUM ION
Authors:Syed Ibrahim, B, Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-03-31
Release date:2009-04-28
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of Glycerate dehydrogenase related protein from Thermoplasma acidophilum
To be Published
6T8C
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BU of 6t8c by Molmil
Crystal structure of formate dehydrogenase FDH2 enzyme from Granulicella mallensis MP5ACTX8 in the apo form.
Descriptor: Formate dehydrogenase
Authors:Robescu, M.S, Rubini, R, Filippini, F, Bergantino, B, Cendron, L.
Deposit date:2019-10-24
Release date:2020-08-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:From the Amelioration of a NADP+-dependent Formate Dehydrogenase to the Discovery of a New Enzyme: Round Trip from Theory to Practice
Chemcatchem, 2020
4CUJ
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BU of 4cuj by Molmil
Structure of Salmonella D-Lactate Dehydrogenase
Descriptor: D-LACTATE DEHYDROGENASE
Authors:Attarataya, J, Zaccai, N.R, Shoemark, D.K, Brady, R.L.
Deposit date:2014-03-19
Release date:2015-05-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:The Structure of Salmonella D-Lactate Dehydrogenase
To be Published
4CUK
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BU of 4cuk by Molmil
Structure of Salmonella D-Lactate Dehydrogenase in complex with NADH
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, D-LACTATE DEHYDROGENASE
Authors:Attarataya, J, Zaccai, N.R, Brady, R.L.
Deposit date:2014-03-19
Release date:2015-05-27
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:The Structure of Salmonella D-Lactate Dehydrogenase
To be Published
6T8Y
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BU of 6t8y by Molmil
NAD+-dependent fungal formate dehydrogenase from Chaetomium thermophilum: A complex with the reduced form of the cofactor NADH and the substrate formate at a secondary site.
Descriptor: 1,2-ETHANEDIOL, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, DI(HYDROXYETHYL)ETHER, ...
Authors:Isupov, M.N, Yelmazer, B, De Rose, S.A, Littlechild, J.A.
Deposit date:2019-10-25
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Structural insights into the NAD + -dependent formate dehydrogenase mechanism revealed from the NADH complex and the formate NAD + ternary complex of the Chaetomium thermophilum enzyme.
J.Struct.Biol., 212, 2020
6TTB
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BU of 6ttb by Molmil
Crystal structure of NAD-dependent formate dehydrogenase from Staphylococcus aureus in complex with NAD
Descriptor: Formate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Boyko, K.M, Pometun, A.A, Nikolaeva, A.Y, Kargov, I.S, Yurchenko, T.S, Savin, S.S, Popov, V.O, Tishkov, V.I.
Deposit date:2019-12-26
Release date:2021-01-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of NAD-dependent formate dehydrogenase from Staphylococcus aureus in complex with NAD
To Be Published

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