Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7BJ3
DownloadVisualize
BU of 7bj3 by Molmil
ScpA from Streptococcus pyogenes, S512A active site mutant
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, C5a peptidase, CALCIUM ION, ...
Authors:Kagawa, T.F, O'Connell, M.R, Cooney, J.C.
Deposit date:2021-01-13
Release date:2021-05-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Enzyme kinetic and binding studies identify determinants of specificity for the immunomodulatory enzyme ScpA, a C5a inactivating bacterial protease.
Comput Struct Biotechnol J, 19, 2021
5YBY
DownloadVisualize
BU of 5yby by Molmil
Structure of human Gliomedin
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Liu, H, Lin, Z, Xu, F.
Deposit date:2017-09-05
Release date:2018-10-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.429 Å)
Cite:High resolution structure of human gliomedin
To Be Published
8C0G
DownloadVisualize
BU of 8c0g by Molmil
SARS-CoV nsp16-nsp10 complexed with N7-GTP
Descriptor: DI(HYDROXYETHYL)ETHER, Non-structural protein 7, SODIUM ION, ...
Authors:Ferron, F, Debarnot, C, Coutard, B, Canard, B, Marseilles Structural Genomics Program @ AFMB (MSGP)
Deposit date:2022-12-16
Release date:2023-12-27
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Observation of N7-GTP in nsp16-nsp10 Sars-CoV
To Be Published
6SED
DownloadVisualize
BU of 6sed by Molmil
Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB in complex with galactose
Descriptor: ACETATE ION, Beta-galactosidase, FORMIC ACID, ...
Authors:Rutkiewicz, M, Bujacz, A, Kaminska, P, Bujacz, G.
Deposit date:2019-07-29
Release date:2019-09-11
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.233 Å)
Cite:Active Site Architecture and Reaction Mechanism Determination of Cold Adapted beta-d-galactosidase fromArthrobactersp. 32cB.
Int J Mol Sci, 20, 2019
7BK6
DownloadVisualize
BU of 7bk6 by Molmil
PfCopC mutant - D83A
Descriptor: ACETATE ION, CHLORIDE ION, COPPER (II) ION, ...
Authors:Muderspach, S.J, Ipsen, J, Rollan, C.H, Bertelsen, A.B, Norholm, M.H.H, Johansen, K.S, Lo Leggio, L.
Deposit date:2021-01-15
Release date:2021-07-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Copper binding and reactivity at the histidine brace motif: insights from mutational analysis of the Pseudomonas fluorescens copper chaperone CopC.
Febs Lett., 595, 2021
7BH7
DownloadVisualize
BU of 7bh7 by Molmil
Room temperature, serial X-ray structure of the ertapenem-derived acylenzyme of CTX-M-15 (10 min soak) collected on fixed target chips at Diamond Light Source I24
Descriptor: (2~{S},3~{R},4~{R})-3-[5-[(3-carboxyphenyl)carbamoyl]pyrrolidin-3-yl]sulfanyl-4-methyl-5-[(2~{S},3~{R})-3-oxidanyl-1-oxidanylidene-butan-2-yl]-3,4-dihydro-2~{H}-pyrrole-2-carboxylic acid, Beta-lactamase, CHLORIDE ION, ...
Authors:Hinchliffe, P, Tooke, C.L, Butryn, A, Spencer, J.
Deposit date:2021-01-10
Release date:2021-07-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:An on-demand, drop-on-drop method for studying enzyme catalysis by serial crystallography.
Nat Commun, 12, 2021
2CF8
DownloadVisualize
BU of 2cf8 by Molmil
Complex of recombinant human thrombin with an inhibitor
Descriptor: 4- [(1R,3AS,4R,8AS,8BR)- 2- (4-CHLOROBENZYL)- 1- ISOPROPYL- 3- OXODECAHYDROPYRROLO[3,4- A]PYRROLIZIN- 4- YL]BENZENECARBOXIMIDAMIDE, CALCIUM ION, HIRUDIN IIIA, ...
Authors:Schweizer, E, Hoffmann-Roeder, A, Olsen, J.A, Obst-Sander, U, Wagner, B, Kansy, M, Banner, D.W, Diederich, F.
Deposit date:2006-02-17
Release date:2006-06-14
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Multipolar Interactions in the D Pocket of Thrombin: Large Differences between Tricyclic Imide and Lactam Inhibitors.
Org.Biomol.Chem., 4, 2006
4ZBK
DownloadVisualize
BU of 4zbk by Molmil
Crystal Structure of human GGT1 in complex with GGsTop inhibitor
Descriptor: (2S)-2-amino-4-[(S)-hydroxy(methoxy)phosphoryl]butanoic acid, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Terzyan, S, Hanigan, M.
Deposit date:2015-04-14
Release date:2015-06-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Human gamma-Glutamyl Transpeptidase 1: STRUCTURES OF THE FREE ENZYME, INHIBITOR-BOUND TETRAHEDRAL TRANSITION STATES, AND GLUTAMATE-BOUND ENZYME REVEAL NOVEL MOVEMENT WITHIN THE ACTIVE SITE DURING CATALYSIS.
J.Biol.Chem., 290, 2015
2CC9
DownloadVisualize
BU of 2cc9 by Molmil
Complexes of Dodecin with Flavin and Flavin-like Ligands
Descriptor: CHLORIDE ION, MAGNESIUM ION, SODIUM ION, ...
Authors:Grininger, M, Zeth, K, Oesterhelt, D.
Deposit date:2006-01-13
Release date:2006-01-31
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Dodecins: A Family of Lumichrome Binding Proteins.
J.Mol.Biol., 357, 2006
7BH6
DownloadVisualize
BU of 7bh6 by Molmil
Room temperature, serial X-ray structure of CTX-M-15 collected on fixed target chips at Diamond Light Source I24
Descriptor: Beta-lactamase, CHLORIDE ION, SODIUM ION, ...
Authors:Hinchliffe, P, Tooke, C.L, Butryn, A, Spencer, J.
Deposit date:2021-01-10
Release date:2021-07-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:An on-demand, drop-on-drop method for studying enzyme catalysis by serial crystallography.
Nat Commun, 12, 2021
7BHN
DownloadVisualize
BU of 7bhn by Molmil
Crystal structure of hen egg white lysozyme using drop-on-drop SFX method - 2 s mixing with N-acetyl-D-glucosamine.
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose, CHLORIDE ION, Lysozyme, ...
Authors:Butryn, A, Orville, A.M.
Deposit date:2021-01-11
Release date:2021-07-21
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:An on-demand, drop-on-drop method for studying enzyme catalysis by serial crystallography.
Nat Commun, 12, 2021
2C8Y
DownloadVisualize
BU of 2c8y by Molmil
thrombin inhibitors
Descriptor: DIMETHYL SULFOXIDE, HIRUDIN VARIANT-2, N-[(2R,3S)-3-AMINO-2-HYDROXY-4-PHENYLBUTYL]NAPHTHALENE-2-SULFONAMIDE, ...
Authors:Howard, N, Abell, C, Blakemore, W, Carr, R, Chessari, G, Congreve, M, Howard, S, Jhoti, H, Murray, C.W, Seavers, L.C.A, van Montfort, R.L.M.
Deposit date:2005-12-08
Release date:2006-07-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Application of Fragment Screening and Fragment Linking to the Discovery of Novel Thrombin Inhibitors
J.Med.Chem., 49, 2006
7BHK
DownloadVisualize
BU of 7bhk by Molmil
Crystal structure of hen egg white lysozyme using drop-on-drop SFX method.
Descriptor: CHLORIDE ION, Lysozyme, SODIUM ION
Authors:Butryn, A, Orville, A.M.
Deposit date:2021-01-11
Release date:2021-07-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:An on-demand, drop-on-drop method for studying enzyme catalysis by serial crystallography.
Nat Commun, 12, 2021
7BH5
DownloadVisualize
BU of 7bh5 by Molmil
XFEL structure of the ertapenem-derived CTX-M-15 acylenzyme after mixing for 2 sec using a piezoelectric injector (PolyPico)
Descriptor: (2~{S},3~{R},4~{R})-3-[5-[(3-carboxyphenyl)carbamoyl]pyrrolidin-3-yl]sulfanyl-4-methyl-5-[(2~{S},3~{R})-3-oxidanyl-1-oxidanylidene-butan-2-yl]-3,4-dihydro-2~{H}-pyrrole-2-carboxylic acid, Beta-lactamase, CHLORIDE ION, ...
Authors:Hinchliffe, P, Tooke, C.L, Butryn, A, Spencer, J.
Deposit date:2021-01-10
Release date:2021-07-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:An on-demand, drop-on-drop method for studying enzyme catalysis by serial crystallography.
Nat Commun, 12, 2021
7BHM
DownloadVisualize
BU of 7bhm by Molmil
Crystal structure of hen egg white lysozyme using drop-on-drop SFX method - 0.7 s mixing with N-acetyl-D-glucosamine.
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose, CHLORIDE ION, Lysozyme, ...
Authors:Butryn, A, Orville, A.M.
Deposit date:2021-01-11
Release date:2021-07-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:An on-demand, drop-on-drop method for studying enzyme catalysis by serial crystallography.
Nat Commun, 12, 2021
7BHL
DownloadVisualize
BU of 7bhl by Molmil
Crystal structure of hen egg white lysozyme using drop-on-drop SFX method - 0.2 s mixing with N-acetyl-D-glucosamine.
Descriptor: CHLORIDE ION, Lysozyme, SODIUM ION
Authors:Butryn, A, Orville, A.M.
Deposit date:2021-01-11
Release date:2021-07-21
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:An on-demand, drop-on-drop method for studying enzyme catalysis by serial crystallography.
Nat Commun, 12, 2021
2C7G
DownloadVisualize
BU of 2c7g by Molmil
FprA from Mycobacterium tuberculosis: His57Gln mutant
Descriptor: 4-OXO-NICOTINAMIDE-ADENINE DINUCLEOTIDE PHOSPHATE, FLAVIN-ADENINE DINUCLEOTIDE, NADPH-FERREDOXIN REDUCTASE FPRA, ...
Authors:Pennati, A, Razeto, A, De Rosa, M, Pandini, V, Vanoni, M.A, Aliverti, A, Mattevi, A, Coda, A, Zanetti, G.
Deposit date:2005-11-24
Release date:2006-07-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Role of the His57-Glu214 Ionic Couple Located in the Active Site of Mycobacterium Tuberculosis Fpra.
Biochemistry, 45, 2006
2C90
DownloadVisualize
BU of 2c90 by Molmil
thrombin inhibitors
Descriptor: 1-(4-CHLOROPHENYL)-1H-TETRAZOLE, DIMETHYL SULFOXIDE, HIRUDIN VARIANT-2, ...
Authors:Howard, N, Abell, C, Blakemore, W, Carr, R, Chessari, G, Congreve, M, Howard, S, Jhoti, H, Murray, C.W, Seavers, L.C.A, van Montfort, R.L.M.
Deposit date:2005-12-08
Release date:2006-07-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Application of Fragment Screening and Fragment Linking to the Discovery of Novel Thrombin Inhibitors
J.Med.Chem., 49, 2006
8DYZ
DownloadVisualize
BU of 8dyz by Molmil
Hen lysozyme in tetragonal space group at ambient temperature - diffuse scattering dataset
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Meisburger, S.P, Ando, N.
Deposit date:2022-08-05
Release date:2022-09-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.272 Å)
Cite:Robust total X-ray scattering workflow to study correlated motion of proteins in crystals.
Nat Commun, 14, 2023
5SWQ
DownloadVisualize
BU of 5swq by Molmil
Crystal Structure of HLA-A*0201 in complex with NA231, an influenza epitope
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, A-2 alpha chain, ...
Authors:Josephs, T.M, Rossjohn, J, Gras, S.
Deposit date:2016-08-08
Release date:2016-10-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Lack of Heterologous Cross-reactivity toward HLA-A*02:01 Restricted Viral Epitopes Is Underpinned by Distinct alpha beta T Cell Receptor Signatures.
J.Biol.Chem., 291, 2016
7CQO
DownloadVisualize
BU of 7cqo by Molmil
Lysozyme grown in LCP soaked with selenourea for 6 min
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION, ...
Authors:Luo, Z.P, Li, D.F.
Deposit date:2020-08-11
Release date:2021-08-11
Last modified:2022-08-31
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Selenourea for experimental phasing of membrane protein crystals grown in lipid cubic phase
Crystals, 12, 2022
5T0A
DownloadVisualize
BU of 5t0a by Molmil
Crystal Structure of Heparan Sulfate 6-O-Sulfotransferase with bound PAP and heptasaccharide substrate
Descriptor: 1,2-ETHANEDIOL, 2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-4)-2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid, ADENOSINE-3'-5'-DIPHOSPHATE, ...
Authors:Pedersen, L.C, Moon, A.F, Krahn, J.M, Liu, J.
Deposit date:2016-08-15
Release date:2017-02-01
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure Based Substrate Specificity Analysis of Heparan Sulfate 6-O-Sulfotransferases.
ACS Chem. Biol., 12, 2017
8DZ7
DownloadVisualize
BU of 8dz7 by Molmil
Hen lysozyme in orthorhombic space group at ambient temperature - diffuse scattering dataset
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Meisburger, S.P, Imran, S.M.S, Ando, N.
Deposit date:2022-08-06
Release date:2022-09-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Robust total X-ray scattering workflow to study correlated motion of proteins in crystals.
Nat Commun, 14, 2023
5SVM
DownloadVisualize
BU of 5svm by Molmil
Crystal structure of the ATP-gated human P2X3 ion channel bound to agonist 2-methylthio-ATP in the desensitized state
Descriptor: 1,2-ETHANEDIOL, 2-(methylsulfanyl)adenosine 5'-(tetrahydrogen triphosphate), 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:Mansoor, S.E, Lu, W, Oosterheert, W, Shekhar, M, Tajkhorshid, E, Gouaux, E.
Deposit date:2016-08-06
Release date:2016-09-28
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.093 Å)
Cite:X-ray structures define human P2X3 receptor gating cycle and antagonist action.
Nature, 538, 2016
8EN9
DownloadVisualize
BU of 8en9 by Molmil
TehA native-SAD structure determined at 5 keV with a helium environment
Descriptor: CHLORIDE ION, SODIUM ION, Tellurite resistance protein TehA homolog, ...
Authors:Karasawa, A, Andi, B, Ruchs, M.R, Shi, W, McSweeney, S, Hendrickson, W.A, Liu, Q.
Deposit date:2022-09-29
Release date:2022-11-02
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Multi-crystal native-SAD phasing at 5 keV with a helium environment.
Iucrj, 9, 2022

226262

건을2024-10-16부터공개중

PDB statisticsPDBj update infoContact PDBjnumon