Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1W79
DownloadVisualize
BU of 1w79 by Molmil
Crystal structure of the DD-transpeptidase-carboxypeptidase from Actinomadura R39
Descriptor: D-alanyl-D-alanine carboxypeptidase, MAGNESIUM ION, SULFATE ION
Authors:Sauvage, E, Herman, R, Petrella, S, Duez, C, Frere, J.M, Charlier, P.
Deposit date:2004-08-31
Release date:2005-06-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the Actinomadura R39 DD-peptidase reveals new domains in penicillin-binding proteins.
J. Biol. Chem., 280, 2005
5G5H
DownloadVisualize
BU of 5g5h by Molmil
Escherichia coli Periplasmic Aldehyde Oxidase R440H mutant
Descriptor: ACETATE ION, Aldehyde oxidoreductase FAD-binding subunit PaoB, Aldehyde oxidoreductase iron-sulfur-binding subunit PaoA, ...
Authors:Correia, M.A.S, Otrelo-Cardoso, A.R, Romao, M.J, Santos-Silva, T.
Deposit date:2016-05-25
Release date:2016-09-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Escherichia Coli Periplasmic Aldehyde Oxidoreductase is an Exceptional Member of the Xanthine Oxidase Family of Molybdoenzymes.
Acs Chem.Biol., 11, 2016
3LUJ
DownloadVisualize
BU of 3luj by Molmil
Crystal structure of MID domain from hAGO2 in complex with UMP
Descriptor: Protein argonaute-2, URIDINE-5'-MONOPHOSPHATE
Authors:Frank, F, Sonenberg, N, Nagar, B.
Deposit date:2010-02-17
Release date:2010-05-26
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.796 Å)
Cite:Structural basis for 5'-nucleotide base-specific recognition of guide RNA by human AGO2.
Nature, 465, 2010
1W49
DownloadVisualize
BU of 1w49 by Molmil
P4 protein from Bacteriophage PHI12 in complex with AMPcPP and Mg
Descriptor: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, MAGNESIUM ION, NTPASE P4
Authors:Mancini, E.J, Kainov, D.E, Grimes, J.M, Tuma, R, Bamford, D.H, Stuart, D.I.
Deposit date:2004-07-22
Release date:2004-10-29
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Atomic Snapshots of an RNA Packaging Motor Reveal Conformational Changes Linking ATP Hydrolysis to RNA Translocation
Cell(Cambridge,Mass.), 118, 2004
1W7X
DownloadVisualize
BU of 1w7x by Molmil
Factor7 - 413 complex
Descriptor: (S)-[(R)-2-(4-BENZYLOXY-3-METHOXY-PHENYL)-2-(4-CARBAMIMIDOYL-PHENYLAMINO)-ACETYLAMINO]-PHENYL-ACETIC ACID, BLOOD COAGULATION FACTOR VIIA, CALCIUM ION, ...
Authors:Ackermann, J, Alig, L, Banner, D.W, Boehm, H.-J, Groebke-Zbinden, K, Hilpert, K, Lave, T, Kuehne, H, Obst-Sander, U, Riederer, M.A, Stahl, M, Tschopp, T.B, Weber, L, Wessel, H.P.
Deposit date:2004-09-14
Release date:2005-10-25
Last modified:2017-06-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Selective and Orally Bioavailable Phenylglycine Tissue Factor/Factor Viia Inhibitors.
Bioorg.Med.Chem.Lett., 15, 2005
7R5I
DownloadVisualize
BU of 7r5i by Molmil
High resolution Crystal structure of ExsFA, a Bacillus cereus spore exosporium protein
Descriptor: CALCIUM ION, Exosporium protein, GLN-GLU-ASP-PHE-SER-SER-ASP-SER-SER-PHE-SER, ...
Authors:Brear, P, Schack, S, Christie, G.
Deposit date:2022-02-10
Release date:2023-08-23
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:Crystal structure of ExsFA, a Bacillus cereus spore exosporium protein"
To Be Published
7R4W
DownloadVisualize
BU of 7r4w by Molmil
Single stranded DNA binding protein SSB M5 from Fervidobacterium gondwanense
Descriptor: ACETIC ACID, PHOSPHATE ION, Single-stranded DNA-binding protein
Authors:Hakansson, M, Svensson, L.A, Werbowy, O, Al-Karadaghi, S, Kaczorowski, T, Kaczorowska, A.K, Dorawa, S.
Deposit date:2022-02-09
Release date:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Molecular characterization of a single stranded DNA binding protein from Fervidobacterium gondwanense
To Be Published
7N66
DownloadVisualize
BU of 7n66 by Molmil
BACE-1 in complex with ligand 12
Descriptor: Beta-secretase 1, DIMETHYL SULFOXIDE, GLYCEROL, ...
Authors:Shaffer, P.L.
Deposit date:2021-06-07
Release date:2021-10-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:JNJ-67569762, A 2-Aminotetrahydropyridine-Based Selective BACE1 Inhibitor Targeting the S3 Pocket: From Discovery to Clinical Candidate.
J.Med.Chem., 64, 2021
1WBJ
DownloadVisualize
BU of 1wbj by Molmil
wildtype tryptophan synthase complexed with glycerol phosphate
Descriptor: PYRIDOXAL-5'-PHOSPHATE, SN-GLYCEROL-3-PHOSPHATE, SODIUM ION, ...
Authors:Kulik, V, Weyand, M, Schlichting, I.
Deposit date:2004-11-01
Release date:2006-05-24
Last modified:2019-05-22
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:On the Structural Basis of the Catalytic Mechanism and the Regulation of the Alpha Subunit of Tryptophan Synthase from Salmonella Typhimurium and Bx1 from Maize, Two Evolutionarily Related Enzymes.
J.Mol.Biol., 352, 2005
1W18
DownloadVisualize
BU of 1w18 by Molmil
Crystal Structure of levansucrase from Gluconacetobacter diazotrophicus
Descriptor: LEVANSUCRASE, SULFATE ION
Authors:Martinez-Fleites, C, Ortiz-Lombardia, M, Pons, T, Tarbouriech, N, Taylor, E.J, Hernandez, L, Davies, G.J.
Deposit date:2004-06-16
Release date:2005-05-11
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of Levansucrase from the Gram- Negative Bacterium Gluconacetobacter Diazotrophicus.
Biochem.J., 390, 2005
1WA6
DownloadVisualize
BU of 1wa6 by Molmil
The structure of ACC oxidase
Descriptor: 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE 1, FE (II) ION, PHOSPHATE ION, ...
Authors:Zhang, Z, Ren, J.-S, Clifton, I.J, Schofield, C.J.
Deposit date:2004-10-25
Release date:2005-10-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal Structure and Mechanistic Implications of 1-Aminocyclopropane-1-Carboxylic Acid Oxidase (the Ethyling Forming Enzyme)
Chem.Biol., 11, 2004
5G6V
DownloadVisualize
BU of 5g6v by Molmil
Crystal structure of the PCTAIRE1 kinase in complex with inhibitor
Descriptor: 1,2-ETHANEDIOL, 4-[4-({[3-tert-butyl-1-(quinolin-6-yl)-1H-pyrazol-5-yl]carbamoyl}amino)-3-fluorophenoxy]-N-methylpyridine-2-carboxamide, CYCLIN-DEPENDENT KINASE 16
Authors:Dixon-Clarke, S.E, Galan Bartual, S, Elkins, J, Savitsky, P, Kopec, J, Mackenzie, A, Tallant, C, Heroven, C, Burgess-Brown, N, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Bullock, A.
Deposit date:2016-08-16
Release date:2016-11-23
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure and inhibitor specificity of the PCTAIRE-family kinase CDK16.
Biochem.J., 474, 2017
5G4H
DownloadVisualize
BU of 5g4h by Molmil
1.50 A resolution catechol (1,2-dihydroxybenzene) inhibited Sporosarcina pasteurii urease
Descriptor: 1,2-ETHANEDIOL, CATECHOL, HYDROXIDE ION, ...
Authors:Mazzei, L, Cianci, M, Musiani, F, Ciurli, S.
Deposit date:2016-05-13
Release date:2016-12-07
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Inactivation of Urease by Catechol: Kinetics and Structure.
J.Inorg.Biochem., 166, 2016
6E3R
DownloadVisualize
BU of 6e3r by Molmil
Structure of human DNA polymerase beta complexed with 8OA as the template base in a 1-nucleotide gapped DNA
Descriptor: DNA (5'-D(*CP*CP*GP*AP*CP*(A38) P*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A)-3'), DNA (5'-D(P*GP*TP*CP*GP*G)-3'), ...
Authors:Koag, M.-C, Lee, S.
Deposit date:2018-07-14
Release date:2019-04-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Mutagenic Replication of the Major Oxidative Adenine Lesion 7,8-Dihydro-8-oxoadenine by Human DNA Polymerases.
J. Am. Chem. Soc., 141, 2019
7S0Y
DownloadVisualize
BU of 7s0y by Molmil
Structures of TcdB in complex with Cdc42
Descriptor: Cell division control protein 42 homolog, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Zheng, L, Rongsheng, J, Peng, C.
Deposit date:2021-08-31
Release date:2021-09-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Structural basis for selective modification of Rho and Ras GTPases by Clostridioides difficile toxin B.
Sci Adv, 7, 2021
5G3W
DownloadVisualize
BU of 5g3w by Molmil
Structure of HDAC like protein from Bordetella Alcaligenes in complex with the photoswitchable inhibitor CEW65
Descriptor: (2E)-N-hydroxy-3-{4-[(E)-phenyldiazenyl]phenyl}prop-2-enamide, DI(HYDROXYETHYL)ETHER, HISTONE DEACETYLASE-LIKE AMIDOHYDROLASE, ...
Authors:Kraemer, A, Meyer-Almes, F.J, Yildiz, O.
Deposit date:2016-05-02
Release date:2016-11-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Toward Photopharmacological Antimicrobial Chemotherapy Using Photoswitchable Amidohydrolase Inhibitors.
ACS Infect Dis, 3, 2017
7S0Z
DownloadVisualize
BU of 7s0z by Molmil
Structures of TcdB in complex with R-Ras
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, AMMONIUM ION, ...
Authors:Zheng, L, Rongsheng, J, Peng, C.
Deposit date:2021-08-31
Release date:2021-09-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Structural basis for selective modification of Rho and Ras GTPases by Clostridioides difficile toxin B.
Sci Adv, 7, 2021
7N8K
DownloadVisualize
BU of 7n8k by Molmil
LINE-1 endonuclease domain complex with Mg
Descriptor: ACETATE ION, LINE-1 retrotransposable element ORF2 protein, MAGNESIUM ION, ...
Authors:Korolev, S, Miller, I.
Deposit date:2021-06-15
Release date:2021-10-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structural dissection of sequence recognition and catalytic mechanism of human LINE-1 endonuclease.
Nucleic Acids Res., 49, 2021
7RZC
DownloadVisualize
BU of 7rzc by Molmil
Papain-Like Protease of SARS CoV-2 in complex with Jun9-84-3 inhibitor
Descriptor: (1R)-N-[(1H-indol-3-yl)methyl]-N-methyl-1-(naphthalen-1-yl)ethan-1-amine, 1,2-ETHANEDIOL, CHLORIDE ION, ...
Authors:Osipiuk, J, Tesar, C, Endres, M, Wang, J, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-08-27
Release date:2021-09-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Papain-Like Protease of SARS CoV-2 in complex with Jun9-84-3 inhibitor
To be Published
5G2Q
DownloadVisualize
BU of 5g2q by Molmil
The crystal structure of a S-selective transaminase from Arthrobacter sp. with alanine bound
Descriptor: 2-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-PROPIONIC ACID, TRANSAMINASE
Authors:van Oosterwijk, N, Willies, S, Hekelaar, J, Terwisscha van Scheltinga, A.C, Turner, N.J, Dijkstra, B.W.
Deposit date:2016-04-12
Release date:2016-07-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Basis of Substrate Range and Enantioselectivity of Two S-Selective Omega- Transaminases
Biochemistry, 55, 2016
7RTY
DownloadVisualize
BU of 7rty by Molmil
Crystal Structure of PsfC from Pseudomonas syringae PB-5123
Descriptor: FE (II) ION, PsfC
Authors:Ongpipattanakul, C, Nair, S.K.
Deposit date:2021-08-16
Release date:2021-09-15
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.963 Å)
Cite:Biosynthesis of fosfomycin in pseudomonads reveals an unexpected enzymatic activity in the metallohydrolase superfamily.
Proc.Natl.Acad.Sci.USA, 118, 2021
7N8S
DownloadVisualize
BU of 7n8s by Molmil
LINE-1 endonuclease domain complex with DNA
Descriptor: DNA (5'-D(*CP*CP*TP*TP*AP*AP*AP*AP*AP*GP*GP*AP*GP*CP*T)-3'), DNA (5'-D(*GP*CP*TP*CP*CP*TP*TP*TP*TP*TP*AP*AP*GP*GP*A)-3'), LINE-1 retrotransposable element ORF2 protein
Authors:Korolev, S, Miller, I.
Deposit date:2021-06-15
Release date:2021-10-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Structural dissection of sequence recognition and catalytic mechanism of human LINE-1 endonuclease.
Nucleic Acids Res., 49, 2021
5G28
DownloadVisualize
BU of 5g28 by Molmil
The crystal structure of light-driven chloride pump ClR at pH 6.0.
Descriptor: CHLORIDE ION, CHLORIDE PUMPING RHODOPSIN, OLEIC ACID, ...
Authors:Kim, K.L, Kwon, S.K, Jun, S.H, Cha, J.S, Kim, H.Y, Kim, J.H, Cho, H.S.
Deposit date:2016-04-07
Release date:2016-10-19
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Crystal Structure and Functional Characterization of a Light-Driven Chloride Pump Having an Ntq Motif.
Nat.Commun., 7, 2016
5G2D
DownloadVisualize
BU of 5g2d by Molmil
The crystal structure of light-driven chloride pump ClR (T102N) mutant at pH 4.5.
Descriptor: CHLORIDE ION, CHLORIDE PUMP RHODOPSIN, DI(HYDROXYETHYL)ETHER, ...
Authors:Kim, K.L, Kwon, S.K, Jun, S.H, Cha, J.S, Kim, H.Y, Kim, J.H, Cho, H.S.
Deposit date:2016-04-07
Release date:2016-10-19
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure and Functional Characterization of a Light-Driven Chloride Pump Having an Ntq Motif.
Nat.Commun., 7, 2016
7S3W
DownloadVisualize
BU of 7s3w by Molmil
Crystal structure of an N-acetyltransferase from Helicobacter pullorum in the presence of Coenzyme A and dTDP-3-amino-3,6-dideoxy-D-galactose
Descriptor: (3R,4S,5R,6R)-4-amino-3,5-dihydroxy-6-methyloxan-2-yl][hydroxy-[[(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy]phosphoryl] hydrogen phosphate, 1,2-ETHANEDIOL, N-acetyltransferase, ...
Authors:Griffiths, W.A, Spencer, K.D, Thoden, J.B, Holden, H.M.
Deposit date:2021-09-08
Release date:2021-09-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Biochemical investigation of an N-acetyltransferase from Helicobacter pullorum.
Protein Sci., 30, 2021

224004

건을2024-08-21부터공개중

PDB statisticsPDBj update infoContact PDBjnumon