PDB: 1410 resultsInfo pagesStatus searchChemie searchBIRD

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3EYQ	Crystal structure of MJ5 Fab, a germline antibody variant of anti-human cytomegalovirus antibody 8f9 Descriptor: 8f9 Fab, M2J5 Fab Authors: Thomson, C.A, Bryson, S, McLean, G.R, Creagh, A.L, Pai, E.F, Schrader, J.W. Deposit date: 2008-10-21 Release date: 2008-12-16 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Germline V-genes sculpt the binding site of a family of antibodies neutralizing human cytomegalovirus. Embo J., 27, 2008
5KSB	T15-DQ8.5-glia-gamma1 complex Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DQ8.5-glia-gamma1 peptide, ... Authors: Petersen, J, Rossjohn, J, Reid, H.H. Deposit date: 2016-07-08 Release date: 2016-09-21 Last modified: 2020-07-29 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Diverse T Cell Receptor Gene Usage in HLA-DQ8-Associated Celiac Disease Converges into a Consensus Binding Solution. Structure, 24, 2016
5KS9	Bel502-DQ8-glia-alpha1 complex Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Bel502 TCR alpha TRAV20*01, Bel502 TCR beta TRBV9*01, ... Authors: Petersen, J, Rossjohn, J, Reid, H.H. Deposit date: 2016-07-08 Release date: 2016-09-21 Last modified: 2020-07-29 Method: X-RAY DIFFRACTION (2.55 Å) Cite: Diverse T Cell Receptor Gene Usage in HLA-DQ8-Associated Celiac Disease Converges into a Consensus Binding Solution. Structure, 24, 2016
5L8J	Aurora-A kinase domain in complex with vNAR-D01 S93R Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, Aurora kinase A, ... Authors: Burgess, S.G, Bayliss, R. Deposit date: 2016-06-08 Release date: 2016-07-20 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.68 Å) Cite: Allosteric inhibition of Aurora-A kinase by a synthetic vNAR domain. Open Biology, 6, 2016
5KSA	Bel602-DQ8.5-glia-gamma1 complex Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Bel602 alpha TRAV20*01, Bel602 beta TRBV9*01, ... Authors: Petersen, J, Rossjohn, J, Reid, H.H. Deposit date: 2016-07-08 Release date: 2016-09-21 Last modified: 2020-07-29 Method: X-RAY DIFFRACTION (2 Å) Cite: Diverse T Cell Receptor Gene Usage in HLA-DQ8-Associated Celiac Disease Converges into a Consensus Binding Solution. Structure, 24, 2016
5L8L	Aurora-A kinase domain in complex with vNAR-D01 (crystal form 1) Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, Aurora kinase A, ... Authors: Burgess, S.G, Bayliss, R. Deposit date: 2016-06-08 Release date: 2016-07-20 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.67 Å) Cite: Allosteric inhibition of Aurora-A kinase by a synthetic vNAR domain. Open Biology, 6, 2016
5L8K	Aurora-A kinase domain in complex with vNAR-D01 (crystal form 2) Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, Aurora kinase A, ... Authors: Burgess, S.G, Bayliss, R. Deposit date: 2016-06-08 Release date: 2016-07-20 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.79 Å) Cite: Allosteric inhibition of Aurora-A kinase by a synthetic vNAR domain. Open Biology, 6, 2016
5M00	Crystal structure of murine P14 TCR complex with H-2Db and Y4A, modified gp33 peptide from LCMV Descriptor: Beta-2-microglobulin, H-2 class I histocompatibility antigen, D-B alpha chain, ... Authors: Achour, A, Sandalova, T, Sun, R, Han, X. Deposit date: 2016-10-03 Release date: 2017-12-20 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Thernary complexes of TCR P14 give insights into the mechanisms behind reestablishment of CTL responses against a viral escape mutant To Be Published
5M01	Crystal structure of murine P14 TCR/ H-2Db complex with PA, modified gp33 peptide from LCMV Descriptor: Beta-2-microglobulin, GLYCEROL, H-2 class I histocompatibility antigen, ... Authors: Achour, A, Sandalova, T, Sun, R, Han, X. Deposit date: 2016-10-03 Release date: 2017-10-25 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Thernary complexes of TCR P14 give insights into the mechanisms behind reestablishment of CTL responses against a viral escape mutant To Be Published
5M02	Crystal structure of murine P14 TCR / H-2Db with PF, modified gp33 peptide from LCMV Descriptor: Beta-2-microglobulin, GLYCEROL, H-2 class I histocompatibility antigen, ... Authors: Achour, A, Sandalova, T, Sun, R. Deposit date: 2016-10-03 Release date: 2017-12-20 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.75 Å) Cite: Thernary complexes of TCR P14 give insights into the mechanisms behind reestablishment of CTL responses against a viral escape mutant To Be Published
3EPC	CryoEM structure of poliovirus receptor bound to poliovirus type 1 Descriptor: MYRISTIC ACID, Poliovirus receptor, Protein VP1, ... Authors: Zhang, P, Mueller, S, Morais, M.C, Bator, C.M, Bowman, V.D, Hafenstein, S, Wimmer, E, Rossmann, M.G. Deposit date: 2008-09-29 Release date: 2008-11-11 Last modified: 2024-04-17 Method: ELECTRON MICROSCOPY (8 Å) Cite: Crystal structure of CD155 and electron microscopic studies of its complexes with polioviruses. Proc.Natl.Acad.Sci.USA, 105, 2008
3EPF	CryoEM structure of poliovirus receptor bound to poliovirus type 2 Descriptor: 1[2-CHLORO-4-METHOXY-PHENYL-OXYMETHYL]-4-[2,6-DICHLORO-PHENYL-OXYMETHYL]-BENZENE, MYRISTIC ACID, Poliovirus receptor, ... Authors: Zhang, P, Mueller, S, Morais, M.C, Bator, C.M, Bowman, V.D, Hafenstein, S, Wimmer, E, Rossmann, M.G. Deposit date: 2008-09-29 Release date: 2008-11-11 Last modified: 2024-04-17 Method: ELECTRON MICROSCOPY (9 Å) Cite: Crystal structure of CD155 and electron microscopic studies of its complexes with polioviruses. Proc.Natl.Acad.Sci.USA, 105, 2008
3EPD	CryoEM structure of poliovirus receptor bound to poliovirus type 3 Descriptor: MYRISTIC ACID, Poliovirus Type3 peptide, Poliovirus receptor, ... Authors: Zhang, P, Mueller, S, Morais, M.C, Bator, C.M, Bowman, V.D, Hafenstein, S, Wimmer, E, Rossmann, M.G. Deposit date: 2008-09-29 Release date: 2008-11-11 Last modified: 2024-04-17 Method: ELECTRON MICROSCOPY (9 Å) Cite: Crystal structure of CD155 and electron microscopic studies of its complexes with polioviruses. Proc.Natl.Acad.Sci.USA, 105, 2008
3EYO	Crystal structure of anti-human cytomegalovirus antibody 8F9 Descriptor: 8f9 Fab, AD-2 Authors: Thomson, C.A, Bryson, S, McLean, G.R, Creagh, A.L, Pai, E.F, Schrader, J.W. Deposit date: 2008-10-21 Release date: 2008-12-16 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Germline V-genes sculpt the binding site of a family of antibodies neutralizing human cytomegalovirus. Embo J., 27, 2008
3EYU	PFA1 Fab fragment complexed with Ror2(518-525) Descriptor: If kappa light chain, PFA1 Fab Heavy Chain, ROR2(518-525) peptide Authors: Gardberg, A.S, Dealwis, C.G. Deposit date: 2008-10-21 Release date: 2009-05-12 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (2.71 Å) Cite: Structures of Abeta-related peptide--monoclonal antibody complexes. Biochemistry, 48, 2009
3HB3	High resolution crystal structure of Paracoccus denitrificans cytochrome c oxidase Descriptor: ANTIBODY FV FRAGMENT, CALCIUM ION, COPPER (I) ION, ... Authors: Koepke, J, Angerer, H, Peng, G. Deposit date: 2009-05-04 Release date: 2009-06-23 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.25 Å) Cite: High resolution crystal structure of Paracoccus denitrificans cytochrome c oxidase: New insights into the active site and the proton transfer pathways Biochim.Biophys.Acta, 1787, 2009
3HI1	Structure of HIV-1 gp120 (core with V3) in Complex with CD4-Binding-Site Antibody F105 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, F105 Heavy Chain, F105 Light Chain, ... Authors: Kwon, Y.D, Chen, L, Zhou, T, Wu, X, O'Dell, S, Cavacini, L, Hessell, A.J, Pancera, M, Tang, M, Xu, L, Yang, Z, Zhang, M.-Y, Arthos, J, Burton, D.R, Dimitrov, D, Nabel, G.J, Posner, M, Sodroski, J, Wyatt, R, Mascola, J.R, Kwong, P.D. Deposit date: 2009-05-18 Release date: 2009-11-17 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Structural basis of immune evasion at the site of CD4 attachment on HIV-1 gp120. Science, 326, 2009
3EYF	Crystal structure of anti-human cytomegalovirus antibody 8f9 plus gB peptide Descriptor: 8f9 Fab, AD-2, GLYCEROL, ... Authors: Thomson, C.A, Bryson, S, McLean, G.R, Creagh, A.L, Pai, E.F, Schrader, J.W. Deposit date: 2008-10-20 Release date: 2008-12-16 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Germline V-genes sculpt the binding site of a family of antibodies neutralizing human cytomegalovirus. Embo J., 27, 2008
3EYS	PFA1 Fab fragment complexed with pyro-Glu3-A-Beta (3-8) Descriptor: GLYCEROL, If kappa light chain, PFA1 Fab Heavy Chain, ... Authors: Gardberg, A.S, Dealwis, C.G. Deposit date: 2008-10-21 Release date: 2009-05-12 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Structures of Abeta-related peptide--monoclonal antibody complexes. Biochemistry, 48, 2009
4CKD	Model of complex between the E.coli enzyme beta-galactosidase and four single chain Fv antibody domains scFv13R4. Descriptor: BETA-GALACTOSIDASE, SCFV13R4 ANTIBODY FV HEAVY CHAIN, SCFV13R4 ANTIBODY FV LIGHT CHAIN Authors: Vinothkumar, K.R, McMullan, G, Henderson, R. Deposit date: 2014-01-03 Release date: 2014-01-15 Last modified: 2019-10-23 Method: ELECTRON MICROSCOPY (13 Å) Cite: Molecular Mechanism of Antibody-Mediated Activation of Beta-Galactosidase. Structure, 22, 2014
4BFI	Structure of the complex of the extracellular portions of mouse CD200R and mouse CD200 Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CELL SURFACE GLYCOPROTEIN CD200 RECEPTOR 1, ... Authors: Hatherley, D, Lea, S.M, Johnson, S, Barclay, A.N. Deposit date: 2013-03-19 Release date: 2013-05-01 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (3.22 Å) Cite: Structures of Cd200/Cd200 Receptor Family and Implications for Topology, Regulation, and Evolution Structure, 21, 2013
4D9Q	Inhibiting Alternative Pathway Complement Activation by Targeting the Exosite on Factor D Descriptor: Anti-Factor D, heavy chain, light chain, ... Authors: Murray, J.M, Wiesmann, C. Deposit date: 2012-01-11 Release date: 2012-02-22 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.28 Å) Cite: Inhibiting alternative pathway complement activation by targeting the factor d exosite. J.Biol.Chem., 287, 2012
4D9L	Fab structure of anti-HIV-1 gp120 V2 mAb 697 Descriptor: Heavy chain of Fab fragment of anti-HIV1 gp120 V2 mAb 697, Light chain of Fab fragment of anti-HIV1 gp120 V2 mAb 697 Authors: Pan, R.M, Kong, X.P. Deposit date: 2012-01-11 Release date: 2012-03-21 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.485 Å) Cite: Functional and immunochemical cross-reactivity of V2-specific monoclonal antibodies from HIV-1-infected individuals. Virology, 427, 2012
3ZL4	Antibody structural organization: Role of kappa - lambda chain constant domain switch in catalytic functionality Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, A17 ANTIBODY FAB FRAGMENT HEAVY CHAIN, A17 ANTIBODY FAB FRAGMENT LAMBDA LIGHT CHAIN Authors: Chatziefthimiou, S.D, Ponomarenko, N.A, Kurkova, I.N, Smirnov, A.V, Smirnov, I.V, Lamzin, V.S, Gabibov, A.G, Wilmanns, M. Deposit date: 2013-01-28 Release date: 2014-02-05 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Role of Kappa>Lambda Light-Chain Constant-Domain Switch in the Structure and Functionality of A17 Reactibody Acta Crystallogr.,Sect.D, 70, 2014
4D3C	Crystal structure of the NK1 domain of HGF in complex with anti-HGF monoclonal antibody SFN68. Descriptor: HEPATOCYTE GROWTH FACTOR, SFN68 FAB Authors: Kang, Y.J, Kim, K.L, Cho, H.S, Chung, J.H. Deposit date: 2014-10-21 Release date: 2016-01-13 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.62 Å) Cite: A mechanistic basis for converting a receptor tyrosine kinase agonist to an antagonist. to be published

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