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3C7A
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BU of 3c7a by Molmil
A structural basis for substrate and stereo selectivity in octopine dehydrogenase (ODH-NADH)
Descriptor: 1,2-ETHANEDIOL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Octopine dehydrogenase
Authors:Smits, S.H.J, Mueller, A, Schmitt, L, Grieshaber, M.K.
Deposit date:2008-02-07
Release date:2008-07-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A structural basis for substrate selectivity and stereoselectivity in octopine dehydrogenase from Pecten maximus.
J.Mol.Biol., 381, 2008
1L84
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BU of 1l84 by Molmil
A CAVITY-CONTAINING MUTANT OF T4 LYSOZYME IS STABILIZED BY BURIED BENZENE
Descriptor: BENZENE, BETA-MERCAPTOETHANOL, CHLORIDE ION, ...
Authors:Eriksson, A.E, Matthews, B.W.
Deposit date:1992-01-21
Release date:1993-10-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A cavity-containing mutant of T4 lysozyme is stabilized by buried benzene.
Nature, 355, 1992
4F04
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BU of 4f04 by Molmil
A Second Allosteric site in E. coli Aspartate Transcarbamoylase: R-state ATCase with UTP bound
Descriptor: Aspartate carbamoyltransferase catalytic chain, Aspartate carbamoyltransferase regulatory chain, N-(PHOSPHONACETYL)-L-ASPARTIC ACID, ...
Authors:Peterson, A.W, Cockrell, G.M, Kantrowitz, E.R.
Deposit date:2012-05-03
Release date:2012-07-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A second allosteric site in Escherichia coli aspartate transcarbamoylase.
Biochemistry, 51, 2012
4DZL
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BU of 4dzl by Molmil
A de novo designed Coiled Coil CC-Tri
Descriptor: COILED-COIL PEPTIDE CC-TRI
Authors:Bruning, M, Thomson, A.R, Zaccai, N.R, Brady, R.L, Woolfson, D.N.
Deposit date:2012-03-01
Release date:2012-08-29
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A basis set of de novo coiled-coil Peptide oligomers for rational protein design and synthetic biology.
ACS Synth Biol, 1, 2012
1CSH
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BU of 1csh by Molmil
A very short hydrogen bond provides only moderate stabilization of an enzyme: inhibitor complex of citrate synthase
Descriptor: AMIDOCARBOXYMETHYLDETHIA COENZYME *A, CITRATE SYNTHASE, OXALOACETATE ION
Authors:Usher, K.C, Remington, S.J.
Deposit date:1994-03-07
Release date:1994-04-30
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:A very short hydrogen bond provides only moderate stabilization of an enzyme-inhibitor complex of citrate synthase.
Biochemistry, 33, 1994
4DZK
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BU of 4dzk by Molmil
A de novo designed Coiled Coil CC-Tri-N13
Descriptor: CHLORIDE ION, COILED-COIL PEPTIDE CC-TRI-N13
Authors:Bruning, M, Thomson, A.R, Zaccai, N.R, Brady, R.L, Woolfson, D.N.
Deposit date:2012-03-01
Release date:2012-08-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:A basis set of de novo coiled-coil Peptide oligomers for rational protein design and synthetic biology.
ACS Synth Biol, 1, 2012
1L83
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BU of 1l83 by Molmil
A CAVITY-CONTAINING MUTANT OF T4 LYSOZYME IS STABILIZED BY BURIED BENZENE
Descriptor: BENZENE, BETA-MERCAPTOETHANOL, CHLORIDE ION, ...
Authors:Eriksson, A.E, Matthews, B.W.
Deposit date:1992-01-21
Release date:1993-10-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A cavity-containing mutant of T4 lysozyme is stabilized by buried benzene.
Nature, 355, 1992
3PJP
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BU of 3pjp by Molmil
A Tandem SH2 Domain in Transcription Elongation Factor Spt6 Binds the Phosphorylated RNA Polymerase II C-terminal Repeat Domain(CTD)
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ACETATE ION, Transcription elongation factor SPT6
Authors:Sun, M, Lariviere, L, Dengl, S, Mayer, A, Cramer, P.
Deposit date:2010-11-10
Release date:2010-11-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A tandem SH2 domain in transcription elongation factor Spt6 binds the phosphorylated RNA polymerase II C-terminal repeat domain (CTD).
J.Biol.Chem., 285, 2010
3S0M
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BU of 3s0m by Molmil
A Structural Element that Modulates Proton-Coupled Electron Transfer in Oxalate Decarboxylase
Descriptor: 1,2-ETHANEDIOL, CARBONATE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Saylor, B.T, Reinhardt, L.A, Lu, Z, Shukla, M.S, Cleland, W.W, Allen, K.N, Richards, N.G.J.
Deposit date:2011-05-13
Release date:2012-04-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:A structural element that facilitates proton-coupled electron transfer in oxalate decarboxylase.
Biochemistry, 51, 2012
1CPF
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BU of 1cpf by Molmil
A CATION BINDING MOTIF STABILIZES THE COMPOUND I RADICAL OF CYTOCHROME C PEROXIDASE
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CYTOCHROME C PEROXIDASE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Miller, M.A, Han, G.W, Kraut, J.
Deposit date:1994-08-18
Release date:1994-11-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A cation binding motif stabilizes the compound I radical of cytochrome c peroxidase.
Proc.Natl.Acad.Sci.USA, 91, 1994
3M3J
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BU of 3m3j by Molmil
A new crystal form of Lys48-linked diubiquitin
Descriptor: 1,2-ETHANEDIOL, SULFATE ION, Ubiquitin
Authors:Trempe, J.F, Brown, N.R, Noble, M.E.M, Endicott, J.A.
Deposit date:2010-03-09
Release date:2010-03-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A new crystal form of Lys48-linked diubiquitin.
Acta Crystallogr.,Sect.F, 66, 2010
1CPD
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BU of 1cpd by Molmil
A CATION BINDING MOTIF STABILIZES THE COMPOUND I RADICAL OF CYTOCHROME C PEROXIDASE
Descriptor: AMMONIUM ION, CYTOCHROME C PEROXIDASE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Miller, M.A, Han, G.W, Kraut, J.
Deposit date:1994-08-18
Release date:1994-11-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A cation binding motif stabilizes the compound I radical of cytochrome c peroxidase.
Proc.Natl.Acad.Sci.USA, 91, 1994
198D
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BU of 198d by Molmil
A TRIGONAL FORM OF THE IDARUBICIN-D(CGATCG) COMPLEX: CRYSTAL AND MOLECULAR STRUCTURE AT 2.0 ANGSTROMS RESOLUTION
Descriptor: DNA (5'-D(*CP*GP*AP*TP*CP*G)-3'), IDARUBICIN, SPERMINE
Authors:Dautant, A, Langlois D'Estaintot, B, Gallois, B, Brown, T, Hunter, W.N.
Deposit date:1994-11-28
Release date:1995-03-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:A trigonal form of the idarubicin:d(CGATCG) complex; crystal and molecular structure at 2.0 A resolution.
Nucleic Acids Res., 23, 1995
3Q5U
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BU of 3q5u by Molmil
A minimal NLS from human scramblase 4 complexed with importin alpha
Descriptor: Importin subunit alpha-2, Phospholipid scramblase 4
Authors:Bhardwaj, A, Cingolani, G.
Deposit date:2010-12-29
Release date:2011-06-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A Minimal Nuclear Localization Signal (NLS) in Human Phospholipid Scramblase 4 That Binds Only the Minor NLS-binding Site of Importin {alpha}1.
J.Biol.Chem., 286, 2011
1TC1
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BU of 1tc1 by Molmil
A 1.4 ANGSTROM CRYSTAL STRUCTURE FOR THE HYPOXANTHINE PHOSPHORIBOSYLTRANSFERASE OF TRYPANOSOMA CRUZI
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, FORMYCIN B, PROTEIN (HYPOXANTHINE PHOSPHORIBOSYLTRANSFERASE)
Authors:Focia, P.J, Craig III, S.P, Nieves-Alicea, R, Fletterick, R.J, Eakin, A.E.
Deposit date:1998-09-30
Release date:1999-10-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:A 1.4 A crystal structure for the hypoxanthine phosphoribosyltransferase of Trypanosoma cruzi.
Biochemistry, 37, 1998
1CSI
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BU of 1csi by Molmil
A very short hydrogen bond provides only moderate stabilization of an enzyme: inhibitor complex of citrate synthase
Descriptor: CARBOXYMETHYLDETHIA COENZYME *A, CITRATE SYNTHASE, OXALOACETATE ION
Authors:Usher, K.C, Remington, S.J.
Deposit date:1994-03-07
Release date:1994-04-30
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A very short hydrogen bond provides only moderate stabilization of an enzyme-inhibitor complex of citrate synthase.
Biochemistry, 33, 1994
1CPE
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BU of 1cpe by Molmil
A CATION BINDING MOTIF STABILIZES THE COMPOUND I RADICAL OF CYTOCHROME C PEROXIDASE
Descriptor: CYTOCHROME C PEROXIDASE, POTASSIUM ION, PROTOPORPHYRIN IX CONTAINING FE
Authors:Miller, M.A, Han, G.W, Kraut, J.
Deposit date:1994-08-18
Release date:1994-11-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A cation binding motif stabilizes the compound I radical of cytochrome c peroxidase.
Proc.Natl.Acad.Sci.USA, 91, 1994
1U8C
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BU of 1u8c by Molmil
A novel adaptation of the integrin PSI domain revealed from its crystal structure
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Xiong, J.P, Stehle, T, Goodman, S.L, Arnaout, M.A.
Deposit date:2004-08-05
Release date:2004-12-28
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:A novel adaptation of the integrin PSI domain revealed from its crystal structure.
J.Biol.Chem., 279, 2004
1A8W
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BU of 1a8w by Molmil
A K+ CATION-INDUCED CONFORMATIONAL SWITCH WITHIN A LOOP SPANNING SEGMENT OF A DNA QUADRUPLEX CONTAINING G-G-G-C REPEATS, NMR, 8 STRUCTURES
Descriptor: DNA QUADRUPLEX CONTAINING GGGG TETRADS AND GC WATSON-CRICK BASE PAIRS
Authors:Bouaziz, S, Kettani, A, Patel, D.J.
Deposit date:1998-03-28
Release date:1998-10-14
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:A K cation-induced conformational switch within a loop spanning segment of a DNA quadruplex containing G-G-G-C repeats.
J.Mol.Biol., 282, 1998
1B5Q
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BU of 1b5q by Molmil
A 30 ANGSTROM U-SHAPED CATALYTIC TUNNEL IN THE CRYSTAL STRUCTURE OF POLYAMINE OXIDASE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, N,N'-BIS(2,3-BUTADIENYL)-1,4-BUTANE-DIAMINE, ...
Authors:Binda, C, Coda, A, Angelini, R, Federico, R, Ascenzi, P, Mattevi, A.
Deposit date:1999-01-07
Release date:2000-01-07
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A 30-angstrom-long U-shaped catalytic tunnel in the crystal structure of polyamine oxidase.
Structure Fold.Des., 7, 1999
1T31
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BU of 1t31 by Molmil
A Dual Inhibitor of the Leukocyte Proteases Cathepsin G and Chymase with Therapeutic Efficacy in Animals Models of Inflammation
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-[3-({METHYL[1-(2-NAPHTHOYL)PIPERIDIN-4-YL]AMINO}CARBONYL)-2-NAPHTHYL]-1-(1-NAPHTHYL)-2-OXOETHYLPHOSPHONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:de Garavilla, L, Greco, M.N, Giardino, E.C, Wells, G.I, Haertlein, B.J, Kauffman, J.A, Corcoran, T.W, Derian, C.K, Eckardt, A.J, Abraham, W.M, Sukumar, N, Chen, Z, Pineda, A.O, Mathews, F.S, Di Cera, E, Andrade-Gordon, P, Damiano, B.P, Maryanoff, B.E, Pereira, P.J.B, Wang, Z.M, Rubin, H, Huber, R, Bode, W, Schechter, N.M, Strobl, S.
Deposit date:2004-04-23
Release date:2005-03-01
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A novel, potent dual inhibitor of the leukocyte proteases cathepsin G and chymase: molecular mechanisms and anti-inflammatory activity in vivo.
J.Biol.Chem., 280, 2005
1TGL
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BU of 1tgl by Molmil
A SERINE PROTEASE TRIAD FORMS THE CATALYTIC CENTRE OF A TRIACYLGLYCEROL LIPASE
Descriptor: TRIACYL-GLYCEROL ACYLHYDROLASE
Authors:Brady, L, Brzozowski, A.M, Derewenda, Z.S, Dodson, E.J, Dodson, G.G, Tolley, S.P, Turkenburg, J.P, Christiansen, L, Huge-Jensen, B, Norskov, L, Thim, L.
Deposit date:1990-02-05
Release date:1990-10-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A serine protease triad forms the catalytic centre of a triacylglycerol lipase.
Nature, 343, 1990
1ADD
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BU of 1add by Molmil
A PRE-TRANSITION STATE MIMIC OF AN ENZYME: X-RAY STRUCTURE OF ADENOSINE DEAMINASE WITH BOUND 1-DEAZA-ADENOSINE AND ZINC-ACTIVATED WATER
Descriptor: 1-DEAZA-ADENOSINE, ADENOSINE DEAMINASE, ZINC ION
Authors:Wilson, D.K, Quiocho, F.A.
Deposit date:1992-12-22
Release date:1994-01-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A pre-transition-state mimic of an enzyme: X-ray structure of adenosine deaminase with bound 1-deazaadenosine and zinc-activated water.
Biochemistry, 32, 1993
2P7D
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BU of 2p7d by Molmil
A Minimal, 'Hinged' Hairpin Ribozyme Construct Solved with Mimics of the Product Strands at 2.25 Angstroms Resolution
Descriptor: 3' substrate strand, octameric fragment, 5' substrate strand, ...
Authors:Torelli, A.T, Krucinska, J, Wedekind, J.E.
Deposit date:2007-03-20
Release date:2007-05-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:A comparison of vanadate to a 2'-5' linkage at the active site of a small ribozyme suggests a role for water in transition-state stabilization
Rna, 13, 2007
1B37
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A 30 ANGSTROM U-SHAPED CATALYTIC TUNNEL IN THE CRYSTAL STRUCTURE OF POLYAMINE OXIDASE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, PROTEIN (POLYAMINE OXIDASE), ...
Authors:Binda, C, Coda, A, Angelini, R, Federico, R, Ascenzi, P, Mattevi, A.
Deposit date:1998-12-17
Release date:1999-12-17
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A 30-angstrom-long U-shaped catalytic tunnel in the crystal structure of polyamine oxidase.
Structure Fold.Des., 7, 1999

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