Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

3UN6
DownloadVisualize
BU of 3un6 by Molmil
2.0 Angstrom Crystal Structure of Ligand Binding Component of ABC-type Import System from Staphylococcus aureus with Zinc bound
Descriptor: ABC transporter substrate-binding protein, PHOSPHATE ION, ZINC ION
Authors:Minasov, G, Wawrzak, Z, Halavaty, A, Shuvalova, L, Dubrovska, I, Winsor, J, Kiryukhina, O, Bagnoli, F, Falugi, F, Bottomley, M, Grandi, G, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2011-11-15
Release date:2011-12-07
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:2.0 Angstrom Crystal Structure of Ligand Binding Component of ABC-type Import System from Staphylococcus aureus with Zinc bound.
TO BE PUBLISHED
3UPD
DownloadVisualize
BU of 3upd by Molmil
2.9 Angstrom Crystal Structure of Ornithine Carbamoyltransferase (ArgF) from Vibrio vulnificus
Descriptor: Ornithine carbamoyltransferase
Authors:Minasov, G, Halavaty, A, Shuvalova, L, Winsor, J, Dubrovska, I, Papazisi, L, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2011-11-17
Release date:2011-12-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:2.9 Angstrom Crystal Structure of Ornithine Carbamoyltransferase (ArgF) from Vibrio vulnificus.
TO BE PUBLISHED
4KTV
DownloadVisualize
BU of 4ktv by Molmil
Structural insights of MAT enzymes: MATa2b complexed with adenosine and pyrophosphate
Descriptor: 1,2-ETHANEDIOL, ADENOSINE, MAGNESIUM ION, ...
Authors:Murray, B, Antonyuk, S.V, Marina, A, Lu, S.C, Mato, J.M, Hasnain, S.S, Rojas, A.L.
Deposit date:2013-05-21
Release date:2014-07-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structure and function study of the complex that synthesizes S-adenosylmethionine.
IUCrJ, 1, 2014
4K9F
DownloadVisualize
BU of 4k9f by Molmil
Neutron structure of Perdeuterated Rubredoxin refined against 1.75 resolution data collected on the new IMAGINE instrument at HFIR, ORNL
Descriptor: FE (III) ION, Rubredoxin
Authors:Munshi, P, Meilleur, F, Myles, D.
Deposit date:2013-04-19
Release date:2013-12-04
Last modified:2023-09-20
Method:NEUTRON DIFFRACTION (1.75 Å)
Cite:The IMAGINE instrument: first neutron protein structure and new capabilities for neutron macromolecular crystallography.
Acta Crystallogr.,Sect.D, 69, 2013
3U80
DownloadVisualize
BU of 3u80 by Molmil
1.60 Angstrom Resolution Crystal Structure of a 3-Dehydroquinate Dehydratase-like Protein from Bifidobacterium longum
Descriptor: 3-dehydroquinate dehydratase, type II
Authors:Light, S.H, Minasov, G, Shuvalova, L, Papazisi, L, Lavie, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2011-10-14
Release date:2011-10-26
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of a type II dehydroquinate dehydratase-like protein from Bifidobacterium longum.
J.Struct.Funct.Genom., 14, 2013
3TX1
DownloadVisualize
BU of 3tx1 by Molmil
X-ray crystal structure of Listeria monocytogenes EGD-e UDP-N-acetylenolpyruvylglucosamine reductase (MurB)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, SULFATE ION, ...
Authors:Filippova, E.V, Minasov, G, Shuvalova, L, Dubrovska, I, Winsor, J, Papazisi, L, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2011-09-22
Release date:2011-10-05
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:X-ray crystal structure of Listeria monocytogenes EGD-e UDP-N-acetylenolpyruvylglucosamine reductase (MurB).
TO BE PUBLISHED
3U2E
DownloadVisualize
BU of 3u2e by Molmil
EAL domain of phosphodiesterase PdeA in complex with 5'-pGpG and Mg++
Descriptor: GGDEF family protein, MAGNESIUM ION, RNA (5'-R(P*GP*G)-3')
Authors:Filippova, E.V, Minasov, G, Shuvalova, L, Kiryukhina, O, Massa, C, Schirmer, T, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
Deposit date:2011-10-03
Release date:2011-10-12
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:EAL domain from Caulobacter crescentus in complex with 5'-pGpG and Mg++
To be Published
3S6W
DownloadVisualize
BU of 3s6w by Molmil
Crystal structure of Tudor domain of human TDRD3
Descriptor: ISOPROPYL ALCOHOL, Tudor domain-containing protein 3
Authors:Liu, H.P, Xu, R.M.
Deposit date:2011-05-26
Release date:2012-03-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Crystal structure of TDRD3 and methyl-arginine binding characterization of TDRD3, SMN and SPF30
Plos One, 7, 2012
3RXS
DownloadVisualize
BU of 3rxs by Molmil
Crystal structure of Trypsin complexed with (3-methoxyphenyl)methanamine (F04 and A06, cocktail experiment)
Descriptor: 1-(3-methoxyphenyl)methanamine, CALCIUM ION, Cationic trypsin, ...
Authors:Yamane, J, Yao, M, Zhou, Y, Tanaka, I.
Deposit date:2011-05-10
Release date:2011-08-24
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:In-crystal affinity ranking of fragment hit compounds reveals a relationship with their inhibitory activities
J.Appl.Crystallogr., 44, 2011
3SBE
DownloadVisualize
BU of 3sbe by Molmil
Crystal structure of RAC1 P29S mutant
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Ras-related C3 botulinum toxin substrate 1
Authors:Ha, B.H, Boggon, T.J.
Deposit date:2011-06-03
Release date:2012-07-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Exome sequencing identifies recurrent somatic RAC1 mutations in melanoma.
Nat.Genet., 44, 2012
3S5C
DownloadVisualize
BU of 3s5c by Molmil
Crystal Structure of a Hexachlorocyclohexane dehydrochlorinase (LinA) Type2
Descriptor: LinA
Authors:Kukshal, V, Macwan, A.S, Kumar, A, Ramachandran, R.
Deposit date:2011-05-23
Release date:2012-05-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Crystal structure of the hexachlorocyclohexane dehydrochlorinase (LinA-type2): mutational analysis, thermostability and enantioselectivity
Plos One, 7, 2012
3SAI
DownloadVisualize
BU of 3sai by Molmil
Bacuills anthracis Dihydrofolate Reductase bound to propargyl-linked TMP analog, UCP1015
Descriptor: 6-ethyl-5-{3-[3-methoxy-5-(pyridin-4-yl)phenyl]prop-1-yn-1-yl}pyrimidine-2,4-diamine, DI(HYDROXYETHYL)ETHER, Dihydrofolate reductase, ...
Authors:Anderson, A.C, Beierlein, J.M.
Deposit date:2011-06-02
Release date:2012-06-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:SAR studies of heterocyclic propargyl-linked TMP analogs targeting Bacillus dihydrofolate reductase
To be Published
3SBD
DownloadVisualize
BU of 3sbd by Molmil
Crystal structure of RAC1 P29S mutant
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Ras-related C3 botulinum toxin substrate 1
Authors:Ha, B.H, Boggon, T.J.
Deposit date:2011-06-03
Release date:2012-07-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Exome sequencing identifies recurrent somatic RAC1 mutations in melanoma.
Nat.Genet., 44, 2012
3S6T
DownloadVisualize
BU of 3s6t by Molmil
Crystal Structure of insect beta-N-acetyl-D-hexosaminidase OfHex1 V327G complexed with PUGNAc
Descriptor: N-acetylglucosaminidase, O-(2-ACETAMIDO-2-DEOXY D-GLUCOPYRANOSYLIDENE) AMINO-N-PHENYLCARBAMATE
Authors:Zhang, H, Liu, T, Yang, Q, Shen, X.
Deposit date:2011-05-26
Release date:2012-04-11
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Active-pocket size differentiating insectile from bacterial chitinolytic beta-N-acetyl-D-hexosaminidases.
Biochem.J., 438, 2011
3SA1
DownloadVisualize
BU of 3sa1 by Molmil
Bacuills anthracis Dihydrofolate Reductase bound propargyl-linked TMP analog, UCP1021
Descriptor: 6-ethyl-5-{3-[2-methoxy-5-(pyridin-4-yl)phenyl]prop-1-yn-1-yl}pyrimidine-2,4-diamine, Dihydrofolate reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Anderson, A.C, Beierlein, J.M.
Deposit date:2011-06-02
Release date:2012-06-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:SAR studies of heterocyclic propargyl-linked TMP analogs to Bacillus dihydrofolate reductase
to be published
3SHU
DownloadVisualize
BU of 3shu by Molmil
Crystal structure of ZO-1 PDZ3
Descriptor: Tight junction protein ZO-1
Authors:Yu, J, Pan, L, Chen, J, Yu, H, Zhang, M.
Deposit date:2011-06-17
Release date:2011-09-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:The Structure of the PDZ3-SH3-GuK Tandem of ZO-1 Suggests a Supramodular Organization of the Conserved MAGUK Family Scaffold Core
To be Published
3SJ7
DownloadVisualize
BU of 3sj7 by Molmil
Structure of beta-ketoacetyl-CoA reductase (FabG) from Staphylococcus aureus complex with NADPH
Descriptor: 3-oxoacyl-(Acyl-carrier-protein) reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, TETRAETHYLENE GLYCOL
Authors:Dutta, D, Bhattacharyya, S, Das, A.K.
Deposit date:2011-06-21
Release date:2012-01-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure and fluorescence studies reveal the role of helical dimeric interface of staphylococcal fabg1 in positive cooperativity for NADPH.
Proteins, 80, 2012
9FEM
DownloadVisualize
BU of 9fem by Molmil
mNeonGreen - Directionality of Optical Properties of Fluorescent Proteins
Descriptor: SULFATE ION, mNeonGreen
Authors:Myskova, J, Brynda, J, Lazar, J.
Deposit date:2024-05-21
Release date:2025-06-04
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Directionality of Optical Properties of Fluorescent Proteins
To Be Published
9FER
DownloadVisualize
BU of 9fer by Molmil
wasCFP (SG P21) - Directionality of Optical Properties of Fluorescent Proteins
Descriptor: Fluorescent protein plum
Authors:Myskova, J, Brynda, J, Lazar, J.
Deposit date:2024-05-21
Release date:2025-06-04
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Directionality of Optical Properties of Fluorescent Proteins
To Be Published
3S7K
DownloadVisualize
BU of 3s7k by Molmil
Structure of thrombin mutant Y225P in the E form
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, POTASSIUM ION, Prothrombin
Authors:Niu, W, Chen, Z, Gandhi, P, Vogt, A, Pozzi, N, Pele, L.A, Zapata, F, Di Cera, E.
Deposit date:2011-05-26
Release date:2011-07-06
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystallographic and Kinetic Evidence of Allostery in a Trypsin-like Protease.
Biochemistry, 50, 2011
3SH9
DownloadVisualize
BU of 3sh9 by Molmil
Crystal structure of fluorophore-labeled beta-lactamase PenP in complex with cefotaxime
Descriptor: 1-[6-(dimethylamino)naphthalen-2-yl]ethanone, Beta-lactamase, CEFOTAXIME, ...
Authors:Wong, W.-T, Zhao, Y.-X, Leung, Y.-C.
Deposit date:2011-06-16
Release date:2011-07-27
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Increased structural flexibility at the active site of a fluorophore-conjugated beta-lactamase distinctively impacts its binding toward diverse cephalosporin antibiotics
J.Biol.Chem., 286, 2011
3SA2
DownloadVisualize
BU of 3sa2 by Molmil
Bacuills anthracis Dihydrofolate Reductase bound propargyl-linked TMP analog, UCP1014
Descriptor: 6-ethyl-5-[3-(5-methoxybiphenyl-3-yl)prop-1-yn-1-yl]pyrimidine-2,4-diamine, Dihydrofolate reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Anderson, A.C, Beierlein, J.M.
Deposit date:2011-06-02
Release date:2012-06-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:SAR studies of heterocyclic propargyl-linked TMP analogs to Bacillus dihydrofolate reductase
to be published
3SGI
DownloadVisualize
BU of 3sgi by Molmil
Crystal structure of DNA ligase A BRCT domain deleted mutant of Mycobacterium tuberculosis
Descriptor: ADENOSINE MONOPHOSPHATE, DNA ligase
Authors:Kukshal, V, Ravishankar, R.
Deposit date:2011-06-15
Release date:2012-06-20
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Crystal Structure of Domain deleted mutant of Mycobacterium tuberculosis NAD+ dependent DNA ligase capture the AMP cofactor in a new state
To be Published
2XME
DownloadVisualize
BU of 2xme by Molmil
The X-ray structure of CTP:inositol-1-phosphate cytidylyltransferase from Archaeoglobus fulgidus
Descriptor: CTP-INOSITOL-1-PHOSPHATE CYTIDYLYLTRANSFERASE, GLYCEROL
Authors:Brito, J.A, Borges, N, Vonrhein, C, Santos, H, Archer, M.
Deposit date:2010-07-27
Release date:2011-05-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Crystal Structure of Archaeoglobus Fulgidus Ctp:Inositol-1-Phosphate Cytidylyltransferase, a Key Enzyme for Di-Myo-Inositol-Phosphate Synthesis in (Hyper)Thermophiles.
J.Bacteriol., 193, 2011
6JG2
DownloadVisualize
BU of 6jg2 by Molmil
Crystal structure of barley exohydrolaseI wildtype in complex with 4'-nitrophenyl thiolaminaribioside
Descriptor: (2~{R},3~{S},4~{S},5~{R},6~{S})-2-(hydroxymethyl)-6-[(2~{S},3~{S},4~{S},5~{R},6~{S})-2-(hydroxymethyl)-6-(4-nitrophenoxy)-3,5-bis(oxidanyl)oxan-4-yl]sulfanyl-oxane-3,4,5-triol, 2-acetamido-2-deoxy-beta-D-glucopyranose, Barley exohydrolase I, ...
Authors:Luang, S, Streltsov, V.A, Hrmova, M.
Deposit date:2019-02-13
Release date:2020-08-19
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:The evolutionary advantage of an aromatic clamp in plant family 3 glycoside exo-hydrolases.
Nat Commun, 13, 2022

238582

건을2025-07-09부터공개중

PDB statisticsPDBj update infoContact PDBjnumon