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9FBZ
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BU of 9fbz by Molmil
Dye-decolourising peroxidase DtpB mixed with hydrogen peroxide for 1.3 s
Descriptor: MAGNESIUM ION, OXYGEN ATOM, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Lucic, M, Worrall, J.A.R, Hough, M.A, Owen, R.L, Devenish, N.
Deposit date:2024-05-15
Release date:2025-05-28
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Dye-decolourising peroxidase DtpB mixed with hydrogen peroxide for 1.3 s
To Be Published
9R6O
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BU of 9r6o by Molmil
Local refinement of the N-terminal domain (NTD) and receptor binding domain (RBD) from the Porcine hemagglutinating encephalomyelitis virus (PHEV) Spike in the closed conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Fernandez, I, Rey, F.A.
Deposit date:2025-05-13
Release date:2025-08-06
Last modified:2025-11-12
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Dipeptidase 1 is a functional receptor for a porcine coronavirus.
Nat Microbiol, 10, 2025
6Z6S
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BU of 6z6s by Molmil
Crystal structure of Uba4-Urm1 from Chaetomium thermophilum
Descriptor: Adenylyltransferase and sulfurtransferase uba4, Ubiquitin-related modifier 1, ZINC ION
Authors:Grudnik, P, Pabis, M, Ethiraju Ravichandran, K, Glatt, S.
Deposit date:2020-05-29
Release date:2020-07-22
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.153 Å)
Cite:Molecular basis for the bifunctional Uba4-Urm1 sulfur-relay system in tRNA thiolation and ubiquitin-like conjugation.
Embo J., 39, 2020
6ZEL
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BU of 6zel by Molmil
CRYSTAL STRUCTURE OF THE FIRST BROMODOMAIN OF HUMAN BRD4 IN COMPLEX with compound F5
Descriptor: 1,2-ETHANEDIOL, 3,5-dimethyl-4-[(6-methylpyrimidin-4-yl)sulfanylmethyl]-1,2-oxazole, Bromodomain-containing protein 4
Authors:Krojer, T, Martinez-Cartro, M, Picaud, S, Filippakopoulos, P, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Barril, X, von Delft, F.
Deposit date:2020-06-16
Release date:2020-07-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:CRYSTAL STRUCTURE OF THE FIRST BROMODOMAIN OF HUMAN BRD4 IN COMPLEX with compound F5
To Be Published
8KFU
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BU of 8kfu by Molmil
Crystal structure of ZmMOC1 in complex with a nicked Holliday junction soaked in Mn2+ for 180 seconds
Descriptor: 1,2-ETHANEDIOL, DNA (25-MER), DNA (33-MER), ...
Authors:Zhang, D, Luo, Z, Lin, Z.
Deposit date:2023-08-16
Release date:2024-06-26
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:MOC1 cleaves Holliday junctions through a cooperative nick and counter-nick mechanism mediated by metal ions.
Nat Commun, 15, 2024
8GYO
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BU of 8gyo by Molmil
Inner channel lipids regulated gating mechanism of human pannexins.
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, Digitonin, ...
Authors:Cong, Y, Jin, X, Kong, F, Yan, C.
Deposit date:2022-09-23
Release date:2024-04-17
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Inner channel lipids regulated gating mechanism of human pannexins.
To Be Published
6VJQ
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BU of 6vjq by Molmil
Solution NMR structure of Prochlorosin 2.1 produced by Prochlorococcus MIT 9313
Descriptor: Prochlorosin 2.1
Authors:Bobeica, S.C, van der Donk, W.A, Zhu, L.
Deposit date:2020-01-16
Release date:2020-07-08
Last modified:2024-11-20
Method:SOLUTION NMR
Cite:Structural determinants of macrocyclization in substrate-controlled lanthipeptide biosynthetic pathways.
Chem Sci, 11, 2020
6Z82
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BU of 6z82 by Molmil
Thalictrum flavumn Norcoclaurine synthase point mutant in complex with a transition state analoge
Descriptor: 4-[2-[(phenylmethyl)amino]ethyl]benzene-1,2-diol, S-norcoclaurine synthase
Authors:Roddan, R, Sula, A, Keep, N.H.
Deposit date:2020-06-02
Release date:2020-12-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Single step syntheses of (1S)-aryl-tetrahydroisoquinolines by norcoclaurine synthases
Commun Chem, 2020
6X32
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BU of 6x32 by Molmil
Wt pig RyR1 in complex with apoCaM, EGTA condition (class 1 and 2, closed)
Descriptor: Calmodulin-1, Peptidyl-prolyl cis-trans isomerase FKBP1B, Ryanodine Receptor, ...
Authors:Woll, K.W, Haji-Ghassemi, O, Van Petegem, F.
Deposit date:2020-05-21
Release date:2021-01-13
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Pathological conformations of disease mutant Ryanodine Receptors revealed by cryo-EM.
Nat Commun, 12, 2021
6OT0
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BU of 6ot0 by Molmil
Structure of human Smoothened-Gi complex
Descriptor: 17-[3-(3,3-DIMETHYL-OXIRANYL)-1-METHYL-PROPYL]-10,13-DIMETHYL-2,3,4,7,8,9,10,11,12,13,14,15,16,17-TETRADECAHYDRO-1H-CYC LOPENTA[A]PHENANTHREN-3-OL, Fab heavy chain, Fab light chain, ...
Authors:Qi, X, Li, X.
Deposit date:2019-05-02
Release date:2019-06-12
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.84 Å)
Cite:Cryo-EM structure of oxysterol-bound human Smoothened coupled to a heterotrimeric Gi.
Nature, 571, 2019
8R2K
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BU of 8r2k by Molmil
Human Carbonic Anhydrase II in complex with 4-((2-oxo-5-(3,4,5-trimethoxyphenyl)-2,5-dihydrofuran-3-yl)amino)benzenesulfonamide
Descriptor: 4-[[(2~{R})-5-oxidanylidene-2-(2,4,5-trimethoxyphenyl)-2~{H}-furan-4-yl]amino]benzenesulfonamide, Carbonic anhydrase 2, GLYCEROL, ...
Authors:Angeli, A, Ferraroni, M.
Deposit date:2023-11-06
Release date:2024-11-13
Last modified:2025-05-28
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Synthetic Approaches to Novel Human Carbonic Anhydrase Isoform Inhibitors Based on Pyrrol-2-one Moiety.
J.Med.Chem., 67, 2024
8KFW
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BU of 8kfw by Molmil
Crystal structure of ZmMOC1 K229A in complex with a nicked Holliday junction soaked in Mn2+ for 600 seconds
Descriptor: 1,2-ETHANEDIOL, DNA (26-MER), DNA (33-MER), ...
Authors:Zhang, D, Luo, Z, Lin, Z.
Deposit date:2023-08-16
Release date:2024-06-26
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:MOC1 cleaves Holliday junctions through a cooperative nick and counter-nick mechanism mediated by metal ions.
Nat Commun, 15, 2024
9JWC
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BU of 9jwc by Molmil
Three-dimensional structure of homo-dimer of cystathione beta lyase/PLP/+L-alliin complex from lactobacillus delbrueckii(LdPatB)
Descriptor: ALLIIN, PYRIDOXAL-5'-PHOSPHATE, cysteine-S-conjugate beta-lyase
Authors:Liu, Y, Yang, C.
Deposit date:2024-10-10
Release date:2024-11-20
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Cystathionine beta-lyase(PatB)of Lactobacillus lactobacillus delbrueckii at 1.78 ?
To Be Published
9JVA
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BU of 9jva by Molmil
Three-dimensional structure of homo-dimer of cystathione beta lyase/PLP complex from lactobacillus delbrueckii(LdPatB)
Descriptor: PYRIDOXAL-5'-PHOSPHATE, cysteine-S-conjugate beta-lyase
Authors:Liu, Y, Yang, C.
Deposit date:2024-10-08
Release date:2024-11-20
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Cystathionine beta-lyase(PatB)/PLP complex of Lactobacillus lactobacillus delbrueckii at 1.53 ANG
To Be Published
5N0P
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BU of 5n0p by Molmil
Crystal structure of OphA-DeltaC18 in complex with SAH
Descriptor: 1,2-ETHANEDIOL, S-ADENOSYL-L-HOMOCYSTEINE, peptide N-methyltranferase
Authors:Naismith, J.H, Song, H.
Deposit date:2017-02-03
Release date:2018-02-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:A molecular mechanism for the enzymatic methylation of nitrogen atoms within peptide bonds.
Sci Adv, 4, 2018
5N0X
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BU of 5n0x by Molmil
Crystal structure of OphA-DeltaC6 in complex with SAM
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, Peptide N-Methyltransferase, ...
Authors:Song, H, Naismith, J.H.
Deposit date:2017-02-03
Release date:2018-02-14
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:A molecular mechanism for the enzymatic methylation of nitrogen atoms within peptide bonds.
Sci Adv, 4, 2018
8RCI
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BU of 8rci by Molmil
Human p53 DNA-binding domain bound to DARPin C10
Descriptor: 1,2-ETHANEDIOL, Cellular tumor antigen p53, DARPin C10, ...
Authors:Balourdas, D.I, Muenick, P, Strubel, A, Knapp, S, Dotsch, V, Joerger, A.C, Structural Genomics Consortium (SGC)
Deposit date:2023-12-06
Release date:2024-12-18
Last modified:2025-05-28
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:DARPin-induced reactivation of p53 in HPV-positive cells.
Nat.Struct.Mol.Biol., 32, 2025
8HJP
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BU of 8hjp by Molmil
Crystal structure of glycosyltransferase SgUGT94-289-3 in complex with UDP state 1
Descriptor: (20S)-2,5,8,11,14,17-HEXAMETHYL-3,6,9,12,15,18-HEXAOXAHENICOSANE-1,20-DIOL, URIDINE-5'-DIPHOSPHATE, glycosyltranseferease
Authors:Li, M, Zhang, S, Cui, S.
Deposit date:2022-11-23
Release date:2024-05-29
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural insights into the catalytic selectivity of glycosyltransferase SgUGT94-289-3 towards mogrosides.
Nat Commun, 15, 2024
6U0K
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BU of 6u0k by Molmil
TTBK2 kinase domain in complex with Compound 1
Descriptor: 4-[3-HYDROXYANILINO]-6,7-DIMETHOXYQUINAZOLINE, GLYCEROL, PHOSPHATE ION, ...
Authors:Marcotte, D.J, Chodaparambil, J.V.
Deposit date:2019-08-14
Release date:2020-03-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.744 Å)
Cite:The crystal structure of the catalytic domain of tau tubulin kinase 2 in complex with a small-molecule inhibitor
Acta Crystallogr.,Sect.F, 76, 2020
5N87
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BU of 5n87 by Molmil
TTK kinase domain in complex with NTRC 0066-0
Descriptor: 2,5,8,11-TETRAOXATRIDECANE, Dual specificity protein kinase TTK, SODIUM ION, ...
Authors:Uitdehaag, J, Willemsen-Seegers, N, Sterrenburg, J.G, de Man, J, Buijsman, R.C, Zaman, G.J.R.
Deposit date:2017-02-23
Release date:2017-05-31
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Target Residence Time-Guided Optimization on TTK Kinase Results in Inhibitors with Potent Anti-Proliferative Activity.
J. Mol. Biol., 429, 2017
4X9F
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BU of 4x9f by Molmil
Crystal structure of Dscam1 isoform 6.9, N-terminal four Ig domains
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Down Syndrome Cell Adhesion Molecule isoform 6.9, GLYCEROL, ...
Authors:Chen, Q, Yu, Y, Li, S.A, Cheng, L.
Deposit date:2014-12-11
Release date:2015-12-16
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural basis of Dscam1 homodimerization: Insights into context constraint for protein recognition
Sci Adv, 2, 2016
6Z5B
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BU of 6z5b by Molmil
Crystal structure of haspin (GSG2) in complex with macrocycle ODS2003128
Descriptor: 6-(2-methoxyethoxy)-11,15-dimethyl-8-oxa-2,11,15,19,21,23-hexazatetracyclo[15.6.1.13,7.020,24]pentacosa-1(23),3(25),4,6,17,20(24),21-heptaen-10-one, DIMETHYL SULFOXIDE, Serine/threonine-protein kinase haspin
Authors:Chaikuad, A, Benderitter, P, Hoflack, J, Denis, A, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2020-05-26
Release date:2020-06-03
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of haspin (GSG2) in complex with macrocycle ODS2003128
To Be Published
7NE7
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BU of 7ne7 by Molmil
oligopeptidase B from S. proteomaculans with modified hinge region in complex with N-[(1S)-5-amino-1-(chloroacetyl)pentyl]-4-methylbenzenesulfonamide
Descriptor: N-[(1S)-5-amino-1-(chloroacetyl)pentyl]-4-methylbenzenesulfonamide, Oligopeptidase B, SPERMINE
Authors:Petrenko, D.E, Nikolaeva, A.Y, Lazarenko, V.A, Dorovatovskiy, P.V, Vlaskina, A.V, Mikhailova, A.G, Rakitina, T.V, Timofeev, V.I.
Deposit date:2021-02-03
Release date:2021-02-17
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Crystal Structure of N alpha-p-tosyl-lysyl Chloromethylketone-Bound Oligopeptidase B from Serratia Proteamaculans Revealed a New Type of Inhibitor Binding
Crystals, 11, 2021
6ZA3
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BU of 6za3 by Molmil
Structure of the transcriptional repressor Atu1419 (VanR) from agrobacterium fabrum in complex a palindromic DNA (C2221 space group)
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ...
Authors:Morera, S, Vigouroux, A, Legrand, P.
Deposit date:2020-06-04
Release date:2020-12-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Characterization of the first tetrameric transcription factor of the GntR superfamily with allosteric regulation from the bacterial pathogen Agrobacterium fabrum.
Nucleic Acids Res., 49, 2021
9FKB
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BU of 9fkb by Molmil
Tail of emppty Haloferax tailed virus 1
Descriptor: Baseplate to tube adapter protein gp41, HK97 gp6-like/SPP1 gp15-like head-tail connector, MAGNESIUM ION, ...
Authors:Zhang, D, Daum, B, Isupov, M.N, McLaren, M.
Deposit date:2024-06-03
Release date:2025-06-18
Last modified:2025-10-22
Method:ELECTRON MICROSCOPY (2.96 Å)
Cite:Cryo-EM resolves the structure of the archaeal dsDNA virus HFTV1 from head to tail.
Sci Adv, 11, 2025

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