Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5LW7
DownloadVisualize
BU of 5lw7 by Molmil
S. solfataricus ABCE1 post-splitting state
Descriptor: ABC transporter ATP-binding protein, IRON/SULFUR CLUSTER
Authors:Heuer, A, Gerovac, M, Beckmann, R, Tampe, R.
Deposit date:2016-09-15
Release date:2016-11-16
Last modified:2019-02-20
Method:ELECTRON MICROSCOPY (17 Å)
Cite:Structure of the ribosome post-recycling complex probed by chemical cross-linking and mass spectrometry.
Nat Commun, 7, 2016
6YP9
DownloadVisualize
BU of 6yp9 by Molmil
Rabbit muscle actin in complex with ADF-H and ATP-ATTO-488
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Kogan, K, Kotila, T, Lappalainen, P.
Deposit date:2020-04-15
Release date:2020-12-09
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.564 Å)
Cite:A functional family of fluorescent nucleotide analogues to investigate actin dynamics and energetics.
Nat Commun, 12, 2021
6A2W
DownloadVisualize
BU of 6a2w by Molmil
Crystal structure of fucoxanthin chlorophyll a/c complex from Phaeodactylum tricornutum
Descriptor: (3S,3'R,5R,6S,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol, (3S,3'S,5R,5'R,6S,6'R,8'R)-3,5'-dihydroxy-8-oxo-6',7'-didehydro-5,5',6,6',7,8-hexahydro-5,6-epoxy-beta,beta-caroten-3'- yl acetate, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
Authors:Wang, W, Yu, L.J, Kuang, T.Y, Shen, J.R.
Deposit date:2018-06-13
Release date:2019-02-06
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for blue-green light harvesting and energy dissipation in diatoms.
Science, 363, 2019
3V7T
DownloadVisualize
BU of 3v7t by Molmil
Crystal Structure of Human Beta-Tryptase Complexed with a Synthetic Inhibitor with a Tropanylamide Scaffold
Descriptor: CARBONATE ION, TPSB2 protein, {(3-exo)-3-[5-(aminomethyl)-2-fluorophenyl]-8-azabicyclo[3.2.1]oct-8-yl}(4-bromo-3-methyl-5-propoxythiophen-2-yl)methanone
Authors:Zhang, Y, Colonna, C, Michot, N.
Deposit date:2011-12-22
Release date:2012-03-14
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:A beta-tryptase inhibitor with a tropanylamide scaffold to improve in vitro stability and to lower hERG channel binding affinity
Bioorg.Med.Chem.Lett., 22, 2012
4UAG
DownloadVisualize
BU of 4uag by Molmil
UDP-N-ACETYLMURAMOYL-L-ALANINE:D-GLUTAMATE LIGASE
Descriptor: SULFATE ION, UDP-N-ACETYLMURAMOYL-L-ALANINE:D-GLUTAMATE LIGASE, UNKNOWN ATOM OR ION, ...
Authors:Bertrand, J, Auger, G, Martin, L, Fanchon, E, Blanot, D, Le Beller, D, Van Heijenoort, J, Dideberg, O.
Deposit date:1999-03-09
Release date:2000-03-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Determination of the MurD mechanism through crystallographic analysis of enzyme complexes.
J.Mol.Biol., 289, 1999
1ERJ
DownloadVisualize
BU of 1erj by Molmil
CRYSTAL STRUCTURE OF THE C-TERMINAL WD40 DOMAIN OF TUP1
Descriptor: TRANSCRIPTIONAL REPRESSOR TUP1
Authors:Sprague, E.R, Redd, M.J, Johnson, A.D, Wolberger, C.
Deposit date:2000-04-06
Release date:2000-07-26
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the C-terminal domain of Tup1, a corepressor of transcription in yeast.
EMBO J., 19, 2000
6DF0
DownloadVisualize
BU of 6df0 by Molmil
anti-phosphotyrosine antibody 4G10-4D5 Fab complexed with sulfate
Descriptor: 4G10-4D5 Antibody Light chain, 4G10-4D5 Antibody heavy chain, SULFATE ION
Authors:Mou, K, Leung, K, Wells, J.A.
Deposit date:2018-05-13
Release date:2018-11-28
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Engineering Improved Antiphosphotyrosine Antibodies Based on an Immunoconvergent Binding Motif.
J. Am. Chem. Soc., 140, 2018
3VTP
DownloadVisualize
BU of 3vtp by Molmil
HIV fusion inhibitor MT-C34
Descriptor: Transmembrane protein gp41
Authors:Yao, X, Waltersperger, S, Wang, M, Cui, S.
Deposit date:2012-06-02
Release date:2012-08-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The M-T hook structure is critical for design of HIV-1 fusion inhibitors.
J.Biol.Chem., 287, 2012
3VGY
DownloadVisualize
BU of 3vgy by Molmil
Structure of HIV-1 gp41 NHR/fusion inhibitor complex P321
Descriptor: CP32M, Envelope glycoprotein gp160, SULFATE ION
Authors:Yao, X, Waltersperger, S, Wang, M.T, Cui, S.
Deposit date:2011-08-22
Release date:2012-06-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.034 Å)
Cite:Structural basis of potent and broad HIV-1 fusion inhibitor CP32M
J.Biol.Chem., 287, 2012
8C9Z
DownloadVisualize
BU of 8c9z by Molmil
The RSL - sulfonato-calix[8]arene complex, H32 form, citrate pH 6.0
Descriptor: Fucose-binding lectin protein, GLYCEROL, beta-D-fructopyranose, ...
Authors:Mockler, N.M, Ramberg, K, Crowley, P.B.
Deposit date:2023-01-23
Release date:2023-07-12
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Protein-macrocycle polymorphism: crystal form IV of the Ralstonia solanacearum lectin-sulfonato-calix[8]arene complex.
Acta Crystallogr D Struct Biol, 79, 2023
8C9Y
DownloadVisualize
BU of 8c9y by Molmil
The MK-RSL - sulfonato-calix[8]arene complex, H32 form
Descriptor: GLYCEROL, Putative fucose-binding lectin protein, beta-D-fructopyranose, ...
Authors:Mockler, N.M, Ramberg, K, Crowley, P.B.
Deposit date:2023-01-23
Release date:2023-07-12
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Protein-macrocycle polymorphism: crystal form IV of the Ralstonia solanacearum lectin-sulfonato-calix[8]arene complex.
Acta Crystallogr D Struct Biol, 79, 2023
6DEZ
DownloadVisualize
BU of 6dez by Molmil
Anti-phosphotyrosine antibody PY20-4D5 Fab complexed with sulfate
Descriptor: Anti-phosphotyrosine antibody PY20-4D5 heavy chain, Anti-phosphotyrosine antibody PY20-4D5 light chain, SULFATE ION
Authors:Mou, K, Leung, K, Wells, J.A.
Deposit date:2018-05-13
Release date:2018-11-28
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Engineering Improved Antiphosphotyrosine Antibodies Based on an Immunoconvergent Binding Motif.
J. Am. Chem. Soc., 140, 2018
1EOG
DownloadVisualize
BU of 1eog by Molmil
CRYSTAL STRUCTURE OF PI CLASS GLUTATHIONE TRANSFERASE
Descriptor: GLUTATHIONE S-TRANSFERASE
Authors:Rossjohn, J, McKinstry, W.J, Oakley, A.J, Parker, M.W, Stenberg, G, Mannervik, B, Dragani, B, Cocco, R, Aceto, A.
Deposit date:2000-03-22
Release date:2000-10-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures of thermolabile mutants of human glutathione transferase P1-1.
J.Mol.Biol., 302, 2000
4UFN
DownloadVisualize
BU of 4ufn by Molmil
Laboratory evolved variant R-C1B1 of potato epoxide hydrolase StEH1
Descriptor: 1,4-DIETHYLENE DIOXIDE, EPOXIDE HYDROLASE
Authors:Carlsson, A.J, Bauer, P, Nilsson, M, Dobritzsch, D, Kamerlin, S.C.L, Widersten, M.
Deposit date:2015-03-17
Release date:2016-04-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Conformational Diversity and Enantioconvergence in Potato Epoxide Hydrolase 1.
Org.Biomol.Chem., 14, 2016
3VI1
DownloadVisualize
BU of 3vi1 by Molmil
Crystal structure of Pseudomonas aerginosa alkaline protease complexed with Substance P(1-6)
Descriptor: Alkaline metalloproteinase, CALCIUM ION, Substance P1-6, ...
Authors:Matoba, K, Harada, S.
Deposit date:2011-09-13
Release date:2012-09-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of Pseudomonas aerginosa alkaline protease complexed with Substance P(1-6)
To be Published
1EV8
DownloadVisualize
BU of 1ev8 by Molmil
CRYSTAL STRUCTURE ANALYSIS OF CYS167 MUTANT OF ESCHERICHIA COLI
Descriptor: THYMIDYLATE SYNTHASE
Authors:Phan, J, Mahdavian, E, Nivens, M.C, Minor, W, Berger, S, Spencer, H.T, Dunlap, R.B, Lebioda, L.
Deposit date:2000-04-19
Release date:2000-05-03
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Catalytic cysteine of thymidylate synthase is activated upon substrate binding.
Biochemistry, 39, 2000
7NEI
DownloadVisualize
BU of 7nei by Molmil
Polyester Hydrolase Leipzig 7 (PHL7) in the unliganded state
Descriptor: Polyester Hydrolase Leipzig 7 (PHL-7), SODIUM ION
Authors:Richter, P.K, Strater, N.
Deposit date:2021-02-04
Release date:2021-06-23
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Low Carbon Footprint Recycling of Post-Consumer PET Plastic with a Metagenomic Polyester Hydrolase.
ChemSusChem, 15, 2022
3VU5
DownloadVisualize
BU of 3vu5 by Molmil
Short peptide HIV entry Inhibitor SC22EK
Descriptor: AMMONIUM ION, SC22, SULFATE ION, ...
Authors:Yao, X, Chong, H.H, Waltersperger, S, Wang, M.T, He, Y.X, Cui, S.
Deposit date:2012-06-19
Release date:2012-12-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.087 Å)
Cite:Short-peptide fusion inhibitors with high potency against wild-type and enfuvirtide-resistant HIV-1
Faseb J., 27, 2013
1EOH
DownloadVisualize
BU of 1eoh by Molmil
GLUTATHIONE TRANSFERASE P1-1
Descriptor: GLUTATHIONE S-TRANSFERASE
Authors:Rossjohn, J, McKinstry, W.J, Oakley, A.J, Parker, M.W, Stenberg, G, Mannervik, B, Dragani, B, Cocco, R, Aceto, A.
Deposit date:2000-03-22
Release date:2000-10-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structures of thermolabile mutants of human glutathione transferase P1-1.
J.Mol.Biol., 302, 2000
5HZX
DownloadVisualize
BU of 5hzx by Molmil
Crystal structure of zebrafish MTH1 in complex with TH588
Descriptor: ACETATE ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Narwal, M, Gustafsson, R, Brautigam, L, Pudelko, L, Jemth, A.-S, Gad, H, Karsten, S, Carreras-Puigvert, J, Homan, E, Berndt, C, Berglund, U.W, Helleday, T, Stenmark, P.
Deposit date:2016-02-03
Release date:2016-02-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Hypoxic Signaling and the Cellular Redox Tumor Environment Determine Sensitivity to MTH1 Inhibition.
Cancer Res., 76, 2016
1EVF
DownloadVisualize
BU of 1evf by Molmil
CRYSTAL STRUCTURE ANALYSIS OF CYS167 MUTANT OF ESCHERICHIA COLI
Descriptor: SULFATE ION, THYMIDYLATE SYNTHASE
Authors:Phan, J, Mahdavian, E, Nivens, M.C, Minor, W, Berger, S, Spencer, H.T, Dunlap, R.B, Lebioda, L.
Deposit date:2000-04-19
Release date:2000-05-03
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Catalytic cysteine of thymidylate synthase is activated upon substrate binding.
Biochemistry, 39, 2000
2GFK
DownloadVisualize
BU of 2gfk by Molmil
Crystal structure of the zinc-beta-lactamase l1 from stenotrophomonas maltophilia (inhibitor 2)
Descriptor: 2,5-DIPHENYLFURAN-3,4-DICARBOXYLIC ACID, DI(HYDROXYETHYL)ETHER, Metallo-beta-lactamase L1, ...
Authors:Nauton, L, Garau, G, Kahn, R, Dideberg, O.
Deposit date:2006-03-22
Release date:2007-03-27
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural insights into the design of inhibitors for the L1 metallo-beta-lactamase from Stenotrophomonas maltophilia.
J.Mol.Biol., 375, 2008
4W2H
DownloadVisualize
BU of 4w2h by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site
Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S Ribosomal Protein S10, ...
Authors:Polikanov, Y.S, Osterman, I.A, Szal, T, Tashlitsky, V.N, Serebryakova, M.V, Kusochek, P, Bulkley, D, Malanicheva, I.A, Efimenko, T.A, Efremenkova, O.V, Konevega, A.L, Shaw, K.J, Bogdanov, A.A, Rodnina, M.V, Dontsova, O.A, Mankin, A.S, Steitz, T.A, Sergiev, P.V.
Deposit date:2014-09-12
Release date:2014-10-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Amicoumacin a inhibits translation by stabilizing mRNA interaction with the ribosome.
Mol.Cell, 56, 2014
1EH4
DownloadVisualize
BU of 1eh4 by Molmil
BINARY COMPLEX OF CASEIN KINASE-1 FROM S. POMBE WITH AN ATP COMPETITIVE INHIBITOR, IC261
Descriptor: 3-[(2,4,6-TRIMETHOXY-PHENYL)-METHYLENE]-INDOLIN-2-ONE, CASEIN KINASE-1, SULFATE ION
Authors:Mashhoon, N, Demaggio, A.J, Tereshko, V, Bergmeier, S.C, Egli, M, Hoekstra, M.F, Kuret, J.
Deposit date:2000-02-18
Release date:2001-09-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure of a Conformation-Selective Casein Kinase-1 Inhibitor
J.Biol.Chem., 275, 2000
7N9C
DownloadVisualize
BU of 7n9c by Molmil
Potent neutralizing nanobodies resist convergent circulating variants of SARS-CoV-2 by targeting novel and conserved epitopes-CovS with NB95
Descriptor: Nanobody NB95, Spike glycoprotein
Authors:Sun, D, Zhang, C, Shi, Y.
Deposit date:2021-06-17
Release date:2021-08-04
Last modified:2021-08-11
Method:ELECTRON MICROSCOPY (3.71 Å)
Cite:Potent neutralizing nanobodies resist convergent circulating variants of SARS-CoV-2 by targeting diverse and conserved epitopes
Nat Commun, 12, 2021

222624

건을2024-07-17부터공개중

PDB statisticsPDBj update infoContact PDBjnumon