Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2LD1
DownloadVisualize
BU of 2ld1 by Molmil
Structures and chemical shift assignments for the ADD domain of the ATRX protein
Descriptor: Transcriptional regulator ATRX, ZINC ION
Authors:Neuhaus, D, Yang, J.
Deposit date:2011-05-13
Release date:2011-06-08
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural consequences of disease-causing mutations in the ATRX-DNMT3-DNMT3L (ADD) domain of the chromatin-associated protein ATRX.
Proc.Natl.Acad.Sci.USA, 104, 2007
6ES7
DownloadVisualize
BU of 6es7 by Molmil
Structure and dynamics conspire in the evolution of affinity between intrinsically disordered proteins
Descriptor: CREB-binding protein, Nuclear receptor coactivator 3
Authors:Chi, N.C.
Deposit date:2017-10-19
Release date:2018-10-31
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure and dynamics conspire in the evolution of affinity between intrinsically disordered proteins.
Sci Adv, 4, 2018
6NDK
DownloadVisualize
BU of 6ndk by Molmil
Structure of ASLSufA6 A37.5 bound to the 70S A site
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Nguyen, H.T, Hoffer, E.D, Dunham, C.M.
Deposit date:2018-12-13
Release date:2019-02-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.64 Å)
Cite:Importance of a tRNA anticodon loop modification and a conserved, noncanonical anticodon stem pairing intRNACGGProfor decoding
J. Biol. Chem., 294, 2019
4F52
DownloadVisualize
BU of 4f52 by Molmil
Structure of a Glomulin-RBX1-CUL1 complex
Descriptor: Cullin-1, E3 ubiquitin-protein ligase RBX1, Glomulin, ...
Authors:Duda, D.M, Olszewski, J.L, Schulman, B.A.
Deposit date:2012-05-11
Release date:2012-09-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of a Glomulin-RBX1-CUL1 Complex: Inhibition of a RING E3 Ligase through Masking of Its E2-Binding Surface.
Mol.Cell, 47, 2012
3POP
DownloadVisualize
BU of 3pop by Molmil
The crystal structure of GilR, an oxidoreductase that catalyzes the terminal step of gilvocarcin biosynthesis
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GilR oxidase
Authors:Noinaj, N, Bosserman, M.A, Schickli, M.A, Kharel, M.K, Rohr, J, Buchanan, S.K.
Deposit date:2010-11-23
Release date:2011-05-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.651 Å)
Cite:The Crystal Structure and Mechanism of an Unusual Oxidoreductase, GilR, Involved in Gilvocarcin V Biosynthesis.
J.Biol.Chem., 286, 2011
6ND5
DownloadVisualize
BU of 6nd5 by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolution
Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Svetlov, M.S, Plessa, E, Chen, C.-W, Bougas, A, Krokidis, M.G, Dinos, G.P, Polikanov, Y.S.
Deposit date:2018-12-13
Release date:2019-03-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:High-resolution crystal structures of ribosome-bound chloramphenicol and erythromycin provide the ultimate basis for their competition.
RNA, 25, 2019
3PSJ
DownloadVisualize
BU of 3psj by Molmil
Crystal Structure of the Spt6 Tandem SH2 Domain from Saccharomyces cerevisiae, Form Se-Spt6 (1247-1451)
Descriptor: SULFATE ION, Transcription elongation factor SPT6
Authors:Close, D, Hill, C.P.
Deposit date:2010-12-01
Release date:2011-03-30
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.702 Å)
Cite:Crystal structures of the S. cerevisiae Spt6 core and C-terminal tandem SH2 domain.
J.Mol.Biol., 408, 2011
5GHQ
DownloadVisualize
BU of 5ghq by Molmil
Crystal structure of human MTH1(G2K/D120A mutant) in complex with 2-oxo-dATP under high concentrations of 2-oxo-dATP
Descriptor: 7,8-dihydro-8-oxoguanine triphosphatase, SODIUM ION, [[(2R,3S,5R)-5-(6-azanyl-2-oxidanylidene-1H-purin-9-yl)-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate
Authors:Nakamura, T, Waz, S, Hirata, K, Nakabeppu, Y, Yamagata, Y.
Deposit date:2016-06-20
Release date:2017-01-04
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.181 Å)
Cite:Structural and Kinetic Studies of the Human Nudix Hydrolase MTH1 Reveal the Mechanism for Its Broad Substrate Specificity
J. Biol. Chem., 292, 2017
6ND6
DownloadVisualize
BU of 6nd6 by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolution
Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Svetlov, M.S, Plessa, E, Chen, C.-W, Bougas, A, Krokidis, M.G, Dinos, G.P, Polikanov, Y.S.
Deposit date:2018-12-13
Release date:2019-02-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:High-resolution crystal structures of ribosome-bound chloramphenicol and erythromycin provide the ultimate basis for their competition.
RNA, 25, 2019
5HAC
DownloadVisualize
BU of 5hac by Molmil
Crystal structure of Proliferating Cell Nuclear Antigen from Leishmania donovani at 2.95 A resolution
Descriptor: Proliferating cell nuclear antigen
Authors:Singh, P.K, Yadav, S.P, Sharma, P, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2015-12-30
Release date:2016-03-23
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Crystal structure of Proliferating Cell Nuclear Antigen from Leishmania donovani at 2.95 A resolution
To Be Published
1Y6K
DownloadVisualize
BU of 1y6k by Molmil
Crystal structure of human IL-10 complexed with the soluble IL-10R1 chain
Descriptor: Interleukin-10, Interleukin-10 receptor alpha chain
Authors:Yoon, S.I, Jones, B.C, Josepson, K, Logsdon, N.J, Walter, M.R.
Deposit date:2004-12-06
Release date:2005-12-20
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Same structure, different function crystal structure of the Epstein-Barr virus IL-10 bound to the soluble IL-10R1 chain.
Structure, 13, 2005
3FSS
DownloadVisualize
BU of 3fss by Molmil
Structure of the tandem PH domains of Rtt106
Descriptor: GLYCEROL, Histone chaperone RTT106, MALONIC ACID
Authors:Su, D, Thompson, J.R, Mer, G.
Deposit date:2009-01-11
Release date:2009-12-22
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.432 Å)
Cite:Structural basis for recognition of H3K56-acetylated histone H3-H4 by the chaperone Rtt106.
Nature, 483, 2012
6FXV
DownloadVisualize
BU of 6fxv by Molmil
Crystal structure of ERK2 in complex with an adenosine derivative
Descriptor: DIMETHYL SULFOXIDE, Mitogen-activated protein kinase 1, SULFATE ION, ...
Authors:Gelin, M, Labesse, G.
Deposit date:2018-03-09
Release date:2019-03-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:None
To be published
3NAN
DownloadVisualize
BU of 3nan by Molmil
SR Ca(2+)-ATPase in the HnE2 state complexed with a Thapsigargin derivative Boc-(phi)Tg
Descriptor: (3S,3aR,4S,6S,6aR,7S,8S,9R,9aS,9bS)-6-(acetyloxy)-4-{[4-(3-{6-[(tert-butoxycarbonyl)amino]hexyl}-4-hydroxyphenyl)butanoyl]oxy}-3,3a-dihydroxy-3,6,9-trimethyl-8-{[(2Z)-2-methylbut-2-enoyl]oxy}-2-oxododecahydroazuleno[4,5-b]furan-7-yl octanoate, MAGNESIUM ION, PHOSPHATIDYLETHANOLAMINE, ...
Authors:Winther, A.M.L, Sonntag, Y, Olesen, C, Moller, J.V, Nissen, P.
Deposit date:2010-06-02
Release date:2010-06-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Critical roles of hydrophobicity and orientation of side chains for inactivation of sarcoplasmic reticulum Ca2+-ATPase with thapsigargin and thapsigargin analogs
J.Biol.Chem., 285, 2010
6NTA
DownloadVisualize
BU of 6nta by Molmil
Modified ASL proline bound to Thermus thermophilus 70S (cognate)
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Hoffer, E.D, Maehigashi, T, Subaramanian, S, Hong, S, Dunham, C.M.
Deposit date:2019-01-28
Release date:2020-10-14
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural insights into mRNA reading frame regulation by tRNA modification and slippery codon-anticodon pairing.
Elife, 9, 2020
4IDU
DownloadVisualize
BU of 4idu by Molmil
crystal structure of Schmallenberg virus nucleoprotein
Descriptor: SBV nucleoprotein
Authors:Dong, H, Li, P, Elliott, R.M, Dong, C.
Deposit date:2012-12-13
Release date:2013-04-24
Last modified:2013-10-02
Method:X-RAY DIFFRACTION (3.08 Å)
Cite:Structure of Schmallenberg orthobunyavirus nucleoprotein suggests a novel mechanism of genome encapsidation
J.Virol., 87, 2013
6NJR
DownloadVisualize
BU of 6njr by Molmil
Spin-Labeled T177C/A637C Mutant of Rat CYPOR
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Xia, C, Kim, J.J.K.
Deposit date:2019-01-04
Release date:2019-02-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and Functional Studies of the Membrane-Binding Domain of NADPH-Cytochrome P450 Oxidoreductase.
Biochemistry, 58, 2019
3NGN
DownloadVisualize
BU of 3ngn by Molmil
Crystal structure of the human CNOT6L nuclease domain in complex with AMP
Descriptor: ADENOSINE MONOPHOSPHATE, CCR4-NOT transcription complex subunit 6-like
Authors:Wang, H, Morita, M, Yang, W, Bartlam, M, Yamamoto, T, Rao, Z.
Deposit date:2010-06-12
Release date:2010-07-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the human CNOT6L nuclease domain reveals strict poly(A) substrate specificity.
Embo J., 2010
6DYA
DownloadVisualize
BU of 6dya by Molmil
WDR5 in complex with a WIN site inhibitor
Descriptor: DIMETHYL SULFOXIDE, N-[(3,5-dichlorophenyl)methyl]-3-[(1H-imidazol-1-yl)methyl]benzamide, SULFATE ION, ...
Authors:Phan, J, Wang, F, Fesik, S.W.
Deposit date:2018-07-01
Release date:2019-03-13
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Displacement of WDR5 from Chromatin by a WIN Site Inhibitor with Picomolar Affinity.
Cell Rep, 26, 2019
3GA2
DownloadVisualize
BU of 3ga2 by Molmil
Crystal structure of the Endonuclease_V (BSU36170) from Bacillus subtilis, Northeast Structural Genomics Consortium Target SR624
Descriptor: Endonuclease V
Authors:Forouhar, F, Abashidze, M, Hussain, M, Seetharaman, J, Janjua, H, Fang, Y, Xiao, R, Cunningham, K, Ma, L.-C, Owens, L, Wang, D, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2009-02-16
Release date:2009-02-24
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the Endonuclease_V (BSU36170) from Bacillus subtilis, Northeast Structural Genomics Consortium Target SR624
To be Published
5GHI
DownloadVisualize
BU of 5ghi by Molmil
Crystal structure of human MTH1(G2K mutant) in complex with 8-oxo-dGTP
Descriptor: 7,8-dihydro-8-oxoguanine triphosphatase, 8-OXO-2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, SODIUM ION
Authors:Nakamura, T, Waz, S, Hirata, K, Nakabeppu, Y, Yamagata, Y.
Deposit date:2016-06-20
Release date:2017-01-04
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.211 Å)
Cite:Structural and Kinetic Studies of the Human Nudix Hydrolase MTH1 Reveal the Mechanism for Its Broad Substrate Specificity
J. Biol. Chem., 292, 2017
5GHO
DownloadVisualize
BU of 5gho by Molmil
Crystal structure of human MTH1(G2K/D120A mutant) in complex with 8-oxo-dGTP
Descriptor: 7,8-dihydro-8-oxoguanine triphosphatase, 8-OXO-2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, GLYCEROL, ...
Authors:Nakamura, T, Waz, S, Hirata, K, Nakabeppu, Y, Yamagata, Y.
Deposit date:2016-06-20
Release date:2017-01-04
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.191 Å)
Cite:Structural and Kinetic Studies of the Human Nudix Hydrolase MTH1 Reveal the Mechanism for Its Broad Substrate Specificity
J. Biol. Chem., 292, 2017
3GDA
DownloadVisualize
BU of 3gda by Molmil
Crystal study of d(CACGCG).d(CGCGTG) grwon in presence of stannous chloride
Descriptor: 5'-D(*CP*AP*CP*GP*CP*G)-3', 5'-D(*CP*GP*CP*GP*TP*G)-3'
Authors:Mandal, P.K, Venkadesh, S, Gautham, N.
Deposit date:2009-02-23
Release date:2009-04-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Crystal structure of d(CACGCG).d(CGCGTG) grown in presence of SnCl2
To be Published
4IQY
DownloadVisualize
BU of 4iqy by Molmil
Crystal structure of the human protein-proximal ADP-ribosyl-hydrolase MacroD2
Descriptor: MAGNESIUM ION, O-acetyl-ADP-ribose deacetylase MACROD2, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
Authors:Jankevicius, G, Hassler, M, Golia, B, Rybin, V, Zacharias, M, Timinszky, G, Ladurner, A.G.
Deposit date:2013-01-14
Release date:2013-03-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:A family of macrodomain proteins reverses cellular mono-ADP-ribosylation.
Nat.Struct.Mol.Biol., 20, 2013
3GOC
DownloadVisualize
BU of 3goc by Molmil
Crystal structure of the Endonuclease V (SAV1684) from Streptomyces avermitilis. Northeast Structural Genomics Consortium Target SvR196
Descriptor: 3-(2-hydroxyethyl)-2,2-bis(hydroxymethyl)pentane-1,5-diol, CHLORIDE ION, Endonuclease V, ...
Authors:Forouhar, F, Abashidze, M, Hussain, M, Seetharaman, J, Fang, F, Xiao, R, Cunningham, K, Ma, L, Owens, L, Chen, C.X, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2009-03-18
Release date:2009-03-31
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of the Endonuclease V (SAV1684) from Streptomyces avermitilis. Northeast Structural Genomics Consortium Target SvR196.
To be Published

226262

건을2024-10-16부터공개중

PDB statisticsPDBj update infoContact PDBjnumon