Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

2LYI
DownloadVisualize
BU of 2lyi by Molmil
Repetitive domain (RP) of aciniform spidroin 1 from Nephila antipodiana
Descriptor: PROTEIN (entity)
Authors:Wang, S, Huang, W, Yang, D.
Deposit date:2012-09-18
Release date:2013-01-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR structure note: repetitive domain of aciniform spidroin 1 from Nephila antipodiana
J.Biomol.Nmr, 54, 2012
1IOU
DownloadVisualize
BU of 1iou by Molmil
SOLUTION STRUCTURE OF YKT6P (1-140)
Descriptor: YKT6P
Authors:Tochio, H, Tsui, M.M.K, Banfield, D.K, Zhang, M.
Deposit date:2001-04-09
Release date:2003-05-06
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:An autoinhibitory mechanism for nonsyntaxin SNARE proteins revealed by the structure of Ykt6p
SCIENCE, 293, 2001
6O7H
DownloadVisualize
BU of 6o7h by Molmil
Cryo-EM structure of Csm-crRNA-target RNA ternary complex in complex with cA4 in type III-A CRISPR-Cas system
Descriptor: CRISPR system single-strand-specific deoxyribonuclease Cas10/Csm1 (subtype III-A), Csm2, Csm3, ...
Authors:Jia, N, Patel, D.J.
Deposit date:2019-03-07
Release date:2019-07-31
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Second Messenger cA4Formation within the Composite Csm1 Palm Pocket of Type III-A CRISPR-Cas Csm Complex and Its Release Path.
Mol.Cell, 75, 2019
1F1F
DownloadVisualize
BU of 1f1f by Molmil
CRYSTAL STRUCTURE OF CYTOCHROME C6 FROM ARTHROSPIRA MAXIMA
Descriptor: CYTOCHROME C6, HEME C
Authors:Kerfeld, C.A, Serag, A.A, Sawaya, M.R, Krogmann, D.W, Yeates, T.O.
Deposit date:2000-05-18
Release date:2001-08-08
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structures of cytochrome c-549 and cytochrome c6 from the cyanobacterium Arthrospira maxima.
Biochemistry, 40, 2001
2M1W
DownloadVisualize
BU of 2m1w by Molmil
TICAM-2 TIR domain
Descriptor: TIR domain-containing adapter molecule 2
Authors:Enokizono, Y, Kumeta, H, Funami, K, Horiuchi, M, Sarmiento, J, Yamashita, K, Standley, D.M, Matsumoto, M, Seya, T, Inagaki, F.
Deposit date:2012-12-07
Release date:2014-01-15
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structures and interface mapping of the TIR domain-containing adaptor molecules involved in interferon signaling.
Proc.Natl.Acad.Sci.USA, 110, 2013
2MLQ
DownloadVisualize
BU of 2mlq by Molmil
Human CCR2 Membrane-Proximal C-Terminal Region (PRO-C) in a frount bound form
Descriptor: MCP-1 receptor
Authors:Esaki, K, Yoshinaga, S, Tsuji, T, Toda, E, Terashima, Y, Saitoh, T, Kohda, D, Kohno, T, Osawa, M, Ueda, T, Shimada, I, Matsushima, K, Terasawa, H.
Deposit date:2014-03-04
Release date:2014-10-08
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis for the binding of the membrane-proximal C-terminal region of chemokine receptor CCR2 with the cytosolic regulator FROUNT.
Febs J., 281, 2014
2M0D
DownloadVisualize
BU of 2m0d by Molmil
Solution Structure of Miz-1 zinc finger 5
Descriptor: ZINC ION, Zinc finger and BTB domain-containing protein 17
Authors:Bernard, D, Bedard, M, Bilodeau, J, Lavigne, P.
Deposit date:2012-10-24
Release date:2012-11-14
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR Structure Note: Structure of Miz-1 Zinc Fingers 5 to 7
To be Published
2MNW
DownloadVisualize
BU of 2mnw by Molmil
Solution structure of the P22S mutant of N-terminal CS domain of human Shq1
Descriptor: Protein SHQ1 homolog
Authors:Singh, M, Wang, Z, Cascio, D, Feigon, J.
Deposit date:2014-04-16
Release date:2015-01-14
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure and Interactions of the CS Domain of Human H/ACA RNP Assembly Protein Shq1.
J.Mol.Biol., 427, 2015
8PDN
DownloadVisualize
BU of 8pdn by Molmil
Spiral of assembled human metapneumovirus (HMPV) N-RNA
Descriptor: Nucleoprotein, RNA
Authors:Whitehead, J.D, Decool, H, Leyrat, C, Carrique, L, Fix, J, Eleouet, J.F, Galloux, M, Renner, M.
Deposit date:2023-06-12
Release date:2023-12-06
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:Structure of the N-RNA/P interface indicates mode of L/P recruitment to the nucleocapsid of human metapneumovirus.
Nat Commun, 14, 2023
2M2I
DownloadVisualize
BU of 2m2i by Molmil
NMR solution structure of BRCT domain of yeast REV1
Descriptor: DNA repair protein REV1
Authors:Pustovalova, Y, Maciejewski, M.W, Korzhnev, D.M.
Deposit date:2012-12-21
Release date:2013-01-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR mapping of PCNA interaction with translesion synthesis DNA polymerase Rev1 mediated by Rev1-BRCT domain.
J.Mol.Biol., 425, 2013
8PDR
DownloadVisualize
BU of 8pdr by Molmil
Rigid body fit of assembled HMPV N-RNA spiral bound to the C-terminal region of P
Descriptor: Nucleoprotein, Phosphoprotein, RNA
Authors:Whitehead, J.D, Decool, H, Leyrat, C, Carrique, L, Fix, J, Eleouet, J.F, Galloux, M, Renner, M.
Deposit date:2023-06-12
Release date:2023-12-06
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structure of the N-RNA/P interface indicates mode of L/P recruitment to the nucleocapsid of human metapneumovirus.
Nat Commun, 14, 2023
2LYE
DownloadVisualize
BU of 2lye by Molmil
High resolution NMR solution structure of a symmetrical theta-defensin, BTD-2
Descriptor: BTD-2
Authors:Conibear, A.C, Rosengren, K, Harvey, P.J, Craik, D.J.
Deposit date:2012-09-18
Release date:2012-11-28
Last modified:2024-10-09
Method:SOLUTION NMR
Cite:Structural characterization of the cyclic cystine ladder motif of theta-defensins.
Biochemistry, 51, 2012
9MUA
DownloadVisualize
BU of 9mua by Molmil
4OT-SnoaL from P. atlanticus - Apo form
Descriptor: Tautomerase
Authors:Melkonian, T.R, Vuksanovic, N, Allen, K.N, Whitman, C.P.
Deposit date:2025-01-13
Release date:2025-04-09
Last modified:2025-04-30
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Beyond the beta-alpha-beta Fold: Characterization of a SnoaL Domain in the Tautomerase Superfamily.
Biochemistry, 2025
8PDS
DownloadVisualize
BU of 8pds by Molmil
Local refinement of dimeric HMPV N-RNA bound to the C-terminal region of P
Descriptor: Nucleoprotein, Phosphoprotein, RNA
Authors:Whitehead, J.D, Decool, H, Leyrat, C, Carrique, L, Fix, J, Eleouet, J.F, Galloux, M, Renner, M.
Deposit date:2023-06-12
Release date:2023-12-06
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structure of the N-RNA/P interface indicates mode of L/P recruitment to the nucleocapsid of human metapneumovirus.
Nat Commun, 14, 2023
1F2V
DownloadVisualize
BU of 1f2v by Molmil
CRYSTAL STRUCTURE ANALYSIS OF PRECORRIN-8X METHYLMUTASE OF AEROBIC VITAMIN B12 SYNTHESIS
Descriptor: PRECORRIN-8X METHYLMUTASE
Authors:Shipman, L.W, Li, D, Roessner, C.A, Scott, A.I, Sacchettini, J.C.
Deposit date:2000-05-29
Release date:2001-07-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of precorrin-8x methyl mutase.
Structure, 9, 2001
6OI2
DownloadVisualize
BU of 6oi2 by Molmil
Crystal structure of human WDR5 in complex with symmetric dimethyl-L-arginine
Descriptor: GLYCEROL, N3, N4-DIMETHYLARGININE, ...
Authors:Lorton, B.M, Harijan, R.K, Burgos, E, Bonanno, J.B, Almo, S.C, Shechter, D.
Deposit date:2019-04-08
Release date:2020-04-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:A Binary Arginine Methylation Switch on Histone H3 Arginine 2 Regulates Its Interaction with WDR5.
Biochemistry, 59, 2020
8PQE
DownloadVisualize
BU of 8pqe by Molmil
c-KIT kinase domain in complex with avapritinib derivative 11
Descriptor: 1,2-ETHANEDIOL, BROMIDE ION, CHLORIDE ION, ...
Authors:Teuber, A, Niggenaber, J, Mueller, M.P, Rauh, D.
Deposit date:2023-07-11
Release date:2023-12-27
Last modified:2024-08-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Avapritinib-based SAR studies unveil a binding pocket in KIT and PDGFRA.
Nat Commun, 15, 2024
6OLG
DownloadVisualize
BU of 6olg by Molmil
Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)
Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ...
Authors:Li, W, Cate, J.H.D.
Deposit date:2019-04-16
Release date:2019-06-19
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis for selective stalling of human ribosome nascent chain complexes by a drug-like molecule.
Nat.Struct.Mol.Biol., 26, 2019
2LZI
DownloadVisualize
BU of 2lzi by Molmil
High resolution NMR structure of the theta-defensin HTD-2 (retrocyclin 2)
Descriptor: retrocyclin 2
Authors:Conibear, A.C, Rosengren, K, Harvey, P.J, Craik, D.J.
Deposit date:2012-10-02
Release date:2012-11-28
Last modified:2024-11-20
Method:SOLUTION NMR
Cite:Structural characterization of the cyclic cystine ladder motif of theta-defensins.
Biochemistry, 51, 2012
1F00
DownloadVisualize
BU of 1f00 by Molmil
CRYSTAL STRUCTURE OF C-TERMINAL 282-RESIDUE FRAGMENT OF ENTEROPATHOGENIC E. COLI INTIMIN
Descriptor: INTIMIN
Authors:Luo, Y, Frey, E.A, Pfuetzner, R.A, Creagh, A.L, Knoechel, D.G, Haynes, C.A, Finlay, B.B, Strynadka, N.C.J.
Deposit date:2000-05-12
Release date:2000-07-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of enteropathogenic Escherichia coli intimin-receptor complex.
Nature, 405, 2000
2MIY
DownloadVisualize
BU of 2miy by Molmil
Solution NMR structure of a preQ1 Class II riboswitch from Streptococcus pneumoniae
Descriptor: 7-DEAZA-7-AMINOMETHYL-GUANINE, RNA_(59-MER)
Authors:Kang, M, Eichhorn, C.D, Feigon, J.
Deposit date:2013-12-20
Release date:2014-01-29
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural determinants for ligand capture by a class II preQ1 riboswitch.
Proc.Natl.Acad.Sci.USA, 111, 2014
1SMG
DownloadVisualize
BU of 1smg by Molmil
CALCIUM-BOUND E41A MUTANT OF THE N-DOMAIN OF CHICKEN TROPONIN C, NMR, 40 STRUCTURES
Descriptor: CALCIUM ION, TROPONIN C
Authors:Gagne, S.M, Li, M.X, Sykes, B.D.
Deposit date:1997-02-04
Release date:1997-08-12
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Mechanism of direct coupling between binding and induced structural change in regulatory calcium binding proteins.
Biochemistry, 36, 1997
6OV1
DownloadVisualize
BU of 6ov1 by Molmil
Structure of Staphylococcus aureus RNase P protein mutant with defective mRNA degradation activity
Descriptor: Ribonuclease P protein component
Authors:Ha, L, Colquhoun, J, Noinaj, N, Das, C, Dunman, P, Flaherty, D.P.
Deposit date:2019-05-06
Release date:2020-12-02
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Genetic and biochemical characterization of Staphylococcus aureus RnpA
To Be Published
8FC7
DownloadVisualize
BU of 8fc7 by Molmil
Cryo-EM structure of the human TRPV4 - RhoA in complex with GSK2798745
Descriptor: 1-({(5S,7S)-3-[5-(2-hydroxypropan-2-yl)pyrazin-2-yl]-7-methyl-2-oxo-1-oxa-3-azaspiro[4.5]decan-7-yl}methyl)-1H-benzimidazole-6-carbonitrile, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Kwon, D.H, Lee, S.-Y, Zhang, F.
Deposit date:2022-12-01
Release date:2023-07-12
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:TRPV4-Rho GTPase complex structures reveal mechanisms of gating and disease.
Nat Commun, 14, 2023
2MIE
DownloadVisualize
BU of 2mie by Molmil
Solution structure of the CLAVATA encoded peptide of Arabidopsis thaliana - AtCLE44
Descriptor: CLAVATA3/ESR (CLE)-related protein 44
Authors:Bobay, B.G, DiGennaro, P.M, Bird, D.M.
Deposit date:2013-12-13
Release date:2014-12-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Inferring function of CLE peptides from high resolution tertiary structures
To be Published

235458

건을2025-04-30부터공개중

PDB statisticsPDBj update infoContact PDBjnumon