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1FSH
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STRUCTURAL BASIS OF THE RECOGNITION OF THE DISHEVELLED DEP DOMAIN IN THE WNT SIGNALING PATHWAY
分子名称: DISHEVELLED-1
著者Wong, H.C, Zheng, J.
登録日2000-09-08
公開日2001-03-08
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structural basis of the recognition of the dishevelled DEP domain in the Wnt signaling pathway.
Nat.Struct.Biol., 7, 2000
1O7F
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CRYSTAL STRUCTURE OF THE REGULATORY DOMAIN OF EPAC2
分子名称: CAMP-DEPENDENT RAP1 GUANINE-NUCLEOTIDE EXCHANGE FACTOR
著者Rehmann, H, Prakash, B, Wolf, E, Rueppel, A, De Rooij, J, Bos, J.L, Wittinghofer, A.
登録日2002-11-04
公開日2002-11-11
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure and Regulation of the Camp-Binding Domains of Epac2
Nat.Struct.Biol., 10, 2002
1UHW
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Solution structure of the DEP domain of mouse pleckstrin
分子名称: Pleckstrin
著者Inoue, K, Yoshida, M, Hatta, R, Hayashi, F, Shirouzu, M, Terada, T, Kigawa, T, Inoue, M, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Hirota, H, Tanaka, A, Osanai, T, Matsuo, Y, Arakawa, T, Carninci, P, Kawai, J, Hayashizaki, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-07-11
公開日2004-01-11
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of the DEP domain of mouse pleckstrin
To be Published
1V3F
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Solution structure of the DEP domain of mouse pleckstrin2
分子名称: Pleckstrin 2
著者Inoue, K, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-10-31
公開日2004-04-30
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of the DEP domain of mouse pleckstrin2
To be Published
1W4M
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BU of 1w4m by Molmil
Structure of the human pleckstrin DEP domain by multidimensional NMR
分子名称: PLECKSTRIN
著者Civera, C, Simon, B, Stier, G, Sattler, M, Macias, M.J.
登録日2004-07-26
公開日2004-12-15
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure and Dynamics of the Human Pleckstrin Dep Domain: Distinct Molecular Features of a Novel Dep Domain Subfamily
Proteins: Struct.,Funct., Genet., 58, 2005
2BYV
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BU of 2byv by Molmil
Structure of the cAMP responsive exchange factor Epac2 in its auto- inhibited state
分子名称: RAP GUANINE NUCLEOTIDE EXCHANGE FACTOR 4
著者Rehmann, H, Wittinghofer, A, Bos, J.L.
登録日2005-08-08
公開日2006-02-02
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure of the Cyclic-AMP Responsive Exchange Factor Epac2 in its Auto-Inhibited State
Nature, 439, 2006
2CSO
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BU of 2cso by Molmil
Solution structure of the DEP domain of human pleckstrin
分子名称: Pleckstrin
著者Inoue, K, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-22
公開日2005-11-22
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the DEP domain of human pleckstrin
to be published
2PBI
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BU of 2pbi by Molmil
The multifunctional nature of Gbeta5/RGS9 revealed from its crystal structure
分子名称: GLYCEROL, Guanine nucleotide-binding protein subunit beta 5, Regulator of G-protein signaling 9
著者Cheever, M.L, Snyder, J.T, Gershburg, S, Siderovski, D.P, Harden, T.K, Sondek, J.
登録日2007-03-28
公開日2008-01-29
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of the multifunctional Gbeta5-RGS9 complex.
Nat.Struct.Mol.Biol., 15, 2008
2YSR
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BU of 2ysr by Molmil
Solution structure of the DEP domain from human DEP domain-containing protein 1
分子名称: DEP domain-containing protein 1
著者Zhang, H.P, Hayahsi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-03
公開日2007-10-09
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the DEP domain from human DEP domain-containing protein 1
To be Published
3ML6
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BU of 3ml6 by Molmil
a complex between Dishevelled2 and clathrin adaptor AP-2
分子名称: Chimeric complex between protein Dishevelled2 homolog dvl-2 and clathrin adaptor AP-2 complex subunit mu
著者Yu, A, Xing, Y, Harrison, S.C, Kirchhausen, T.L.
登録日2010-04-16
公開日2010-08-11
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structural analysis of the interaction between Dishevelled2 and clathrin AP-2 adaptor, a critical step in noncanonical Wnt signaling.
Structure, 18, 2010
4F7Z
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BU of 4f7z by Molmil
Conformational dynamics of exchange protein directly activated by cAMP
分子名称: GLYCEROL, Rap guanine nucleotide exchange factor 4
著者White, M.A, Tsalkova, T.N, Mei, F.C, Liu, T, Woods, V.L, Cheng, X.
登録日2012-05-16
公開日2012-10-03
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural analyses of a constitutively active mutant of exchange protein directly activated by cAMP.
Plos One, 7, 2012
5LNP
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BU of 5lnp by Molmil
Domain-swapped dimer of human Dishevelled2 DEP domain: monoclinic crystal form crystallised from monomeric fraction
分子名称: SULFATE ION, Segment polarity protein dishevelled homolog DVL-2
著者Renko, M, Gammons, M.V, Bienz, M.
登録日2016-08-05
公開日2016-10-12
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Wnt Signalosome Assembly by DEP Domain Swapping of Dishevelled.
Mol.Cell, 64, 2016
5SUY
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BU of 5suy by Molmil
Domain-swapped dimer of human Dishevelled2 DEP domain: monoclinic crystal form crystallised from dimeric fraction
分子名称: SULFATE ION, Segment polarity protein dishevelled homolog DVL-2
著者Renko, M, Gammons, M.V, Bienz, M.
登録日2016-08-04
公開日2016-10-12
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Wnt Signalosome Assembly by DEP Domain Swapping of Dishevelled.
Mol.Cell, 64, 2016
5SUZ
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BU of 5suz by Molmil
Domain-swapped dimer of human Dishevelled2 DEP domain: C-centered monoclinic crystal form crystallised from monomeric fraction
分子名称: Segment polarity protein dishevelled homolog DVL-2
著者Renko, M, Gammons, M.V, Bienz, M.
登録日2016-08-04
公開日2016-10-12
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Wnt Signalosome Assembly by DEP Domain Swapping of Dishevelled.
Mol.Cell, 64, 2016
6CES
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BU of 6ces by Molmil
Cryo-EM structure of GATOR1-RAG
分子名称: GATOR complex protein DEPDC5, GATOR complex protein NPRL2, GATOR complex protein NPRL3, ...
著者Shen, K, Huang, R.K, Brignole, E.J, Yu, Z, Sabatini, D.M.
登録日2018-02-12
公開日2018-03-28
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Architecture of the human GATOR1 and GATOR1-Rag GTPases complexes.
Nature, 556, 2018
6CET
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BU of 6cet by Molmil
Cryo-EM structure of GATOR1
分子名称: GATOR complex protein DEPDC5, GATOR complex protein NPRL2, GATOR complex protein NPRL3
著者Shen, K, Huang, R.K, Brignole, E.J, Yu, Z, Sabatini, D.M.
登録日2018-02-12
公開日2018-03-28
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Architecture of the human GATOR1 and GATOR1-Rag GTPases complexes.
Nature, 556, 2018
6H7E
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BU of 6h7e by Molmil
GEF regulatory domain
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, SULFATE ION, cDNA FLJ56134, ...
著者Ferrandez, Y, Cherfils, J, Peurois, F.
登録日2018-07-31
公開日2020-02-19
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Membranes prime the RapGEF EPAC1 to transduce cAMP signaling.
Nat Commun, 14, 2023
6N9G
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BU of 6n9g by Molmil
Crystal Structure of RGS7-Gbeta5 dimer
分子名称: Guanine nucleotide-binding protein subunit beta-5, Regulator of G-protein signaling 7
著者Patil, D.N, Rangarajan, E, Izard, T, Martemyanov, K.A.
登録日2018-12-03
公開日2019-01-09
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.129 Å)
主引用文献Structural organization of a major neuronal G protein regulator, the RGS7-G beta 5-R7BP complex.
Elife, 7, 2018
6PCV
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BU of 6pcv by Molmil
Single Particle Reconstruction of Phosphatidylinositol (3,4,5) trisphosphate-dependent Rac exchanger 1 bound to G protein beta gamma subunits
分子名称: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Phosphatidylinositol (3,4,5) trisphosphate-dependent Rac exchanger 1
著者Cash, J.N, Cianfrocco, M.A, Tesmer, J.J.G.
登録日2019-06-18
公開日2019-10-23
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Cryo-electron microscopy structure and analysis of the P-Rex1-G beta gamma signaling scaffold.
Sci Adv, 5, 2019
6VSK
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BU of 6vsk by Molmil
Crystal structure of the P-Rex1 DEP1 domain
分子名称: Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein
著者Tesmer, J, Ravala, S.K.
登録日2020-02-11
公開日2020-07-22
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.12 Å)
主引用文献The first DEP domain of the RhoGEF P-Rex1 autoinhibits activity and contributes to membrane binding.
J.Biol.Chem., 295, 2020
7DKL
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BU of 7dkl by Molmil
Crystal structure of the tandem DEP domains of DEPTOR
分子名称: DEP domain-containing mTOR-interacting protein
著者Weng, Z.F, Shen, X.X, Liu, Y.F.
登録日2020-11-24
公開日2021-12-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural Basis of DEPTOR to Recognize Phosphatidic Acid Using its Tandem DEP Domains.
J.Mol.Biol., 433, 2021
7EWP
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BU of 7ewp by Molmil
Cryo-EM structure of human GPR158 in complex with RGS7-Gbeta5 in a 2:1:1 ratio
分子名称: Guanine nucleotide-binding protein subunit beta-5, Probable G-protein coupled receptor 158, Regulator of G-protein signaling 7
著者Kim, Y, Jeong, E, Jeong, J, Cho, Y.
登録日2021-05-25
公開日2021-12-01
最終更新日2022-02-16
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Structure of the class C orphan GPCR GPR158 in complex with RGS7-G beta 5.
Nat Commun, 12, 2021
7EWR
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Cryo-EM structure of human GPR158 in complex with RGS7-Gbeta5 in a 2:2:2 ratio
分子名称: Guanine nucleotide-binding protein subunit beta-5, Probable G-protein coupled receptor 158, Regulator of G-protein signaling 7
著者Kim, Y, Jeong, E, Jeong, J, Cho, Y.
登録日2021-05-26
公開日2021-12-01
最終更新日2022-02-16
実験手法ELECTRON MICROSCOPY (4.7 Å)
主引用文献Structure of the class C orphan GPCR GPR158 in complex with RGS7-G beta 5.
Nat Commun, 12, 2021
7OWG
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human DEPTOR in a complex with mutant human mTORC1 A1459P
分子名称: DEP domain-containing mTOR-interacting protein, Regulatory-associated protein of mTOR, Serine/threonine-protein kinase mTOR, ...
著者Heimhalt, M, Berndt, A, Wagstaff, J, Anandapadamanaban, M, Perisic, O, Maslen, S, McLaughlin, S, Yu, W.-H, Masson, G.R, Boland, A, Ni, X, Yamashita, K, Murshudov, G.N, Skehel, M, Freund, S.M, Williams, R.L.
登録日2021-06-18
公開日2021-09-08
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (4.7 Å)
主引用文献Bipartite binding and partial inhibition links DEPTOR and mTOR in a mutually antagonistic embrace.
Elife, 10, 2021
7PE7
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cryo-EM structure of DEPTOR bound to human mTOR complex 2, overall refinement
分子名称: ACETYL GROUP, DEP domain-containing mTOR-interacting protein, INOSITOL HEXAKISPHOSPHATE, ...
著者Waelchli, M, Maier, T.
登録日2021-08-09
公開日2021-09-15
最終更新日2021-09-29
実験手法ELECTRON MICROSCOPY (3.41 Å)
主引用文献Regulation of human mTOR complexes by DEPTOR.
Elife, 10, 2021

 

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