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4W8I
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Crystal structure of LpSPL/Lpp2128, Legionella pneumophila sphingosine-1 phosphate lyase
分子名称: Probable sphingosine-1-phosphate lyase
著者Stogios, P.J, Daniels, C, Skarina, T, Cuff, M, Di Leo, R, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2014-08-24
公開日2014-11-05
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Legionella pneumophila S1P-lyase targets host sphingolipid metabolism and restrains autophagy.
Proc.Natl.Acad.Sci.USA, 113, 2016
8CMX
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Structure of sphingosine-1-phosphate lyase (SPL) from Aspergillus fumigatus
分子名称: Sphinganine-1-phosphate aldolase BST1, putative
著者Catalano, F, Pampalone, G.
登録日2023-02-21
公開日2024-01-03
実験手法X-RAY DIFFRACTION (3.46 Å)
主引用文献Dual species sphingosine-1-phosphate lyase inhibitors to combine antifungal and anti-inflammatory activities in cystic fibrosis: a feasibility study.
Sci Rep, 13, 2023
6M4Y
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Structure of a R371A mutant of a Group II PLP dependent decarboxylase from Methanocaldococcus jannaschii
分子名称: GLYCEROL, L-tyrosine/L-aspartate decarboxylase, SULFATE ION
著者Manoj, N, Chellam Gayathri, S.
登録日2020-03-09
公開日2020-12-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystallographic Snapshots of the Dunathan and Quinonoid Intermediates provide Insights into the Reaction Mechanism of Group II Decarboxylases.
J.Mol.Biol., 432, 2020
3VP6
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Structural characterization of Glutamic Acid Decarboxylase; insights into the mechanism of autoinactivation
分子名称: 4-oxo-4H-pyran-2,6-dicarboxylic acid, GLYCEROL, Glutamate decarboxylase 1
著者Langendorf, C.G, Tuck, K.L, Key, T.L.G, Rosado, C.J, Wong, A.S.M, Fenalti, G, Buckle, A.M, Law, R.H.P, Whisstock, J.C.
登録日2012-02-27
公開日2013-01-16
最終更新日2013-08-14
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural characterization of the mechanism through which human glutamic acid decarboxylase auto-activates
Biosci.Rep., 33, 2013
5K1R
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BU of 5k1r by Molmil
Structure of Burkholderia pseudomallei K96243 sphingosine-1-phosphate lyase Bpss2021
分子名称: Burkholderia pseudomallei sphingosine-1-phosphate lyase Bpss2021, PYRIDOXAL-5'-PHOSPHATE
著者Mclean, C.J, Campopiano, D.J, Marles-Wright, J.
登録日2016-05-18
公開日2016-11-02
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.104 Å)
主引用文献Characterization of homologous sphingosine-1-phosphate lyase isoforms in the bacterial pathogen Burkholderia pseudomallei.
J. Lipid Res., 58, 2017
2JIS
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Human cysteine sulfinic acid decarboxylase (CSAD) in complex with PLP.
分子名称: CYSTEINE SULFINIC ACID DECARBOXYLASE, NITRATE ION, PYRIDOXAL-5'-PHOSPHATE
著者Collins, R, Moche, M, Arrowsmith, C, Berglund, H, Busam, R, Dahlgren, L.G, Edwards, A, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Hallberg, B.M, Johansson, I, Kallas, A, Karlberg, T, Kotenyova, T, Lehtio, L, Nordlund, P, Nyman, T, Ogg, D, Persson, C, Sagemark, J, Stenmark, P, Sundstrom, M, Thorsell, A.G, Tresaugues, L, van den Berg, S, Weigelt, J, Welin, M, Holmberg-Schiavone, L, Structural Genomics Consortium (SGC)
登録日2007-06-30
公開日2007-08-28
最終更新日2015-04-22
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The Crystal Structure of Human Cysteine Sulfinic Acid Decarboxylase (Csad)
To be Published
4E1O
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Human histidine decarboxylase complex with Histidine methyl ester (HME)
分子名称: HISTIDINE-METHYL-ESTER, Histidine decarboxylase, PYRIDOXAL-5'-PHOSPHATE
著者Komori, H, Nitta, Y, Ueno, H, Higuchi, Y.
登録日2012-03-06
公開日2012-07-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural study reveals that Ser-354 determines substrate specificity on human histidine decarboxylase
J.Biol.Chem., 287, 2012
8AYF
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Crystal structure of human Sphingosine-1-phosphate lyase 1
分子名称: ACETATE ION, GLYCEROL, Sphingosine-1-phosphate lyase 1
著者Giardina, G, Catalano, F, Pampalone, G, Cellini, B.
登録日2022-09-02
公開日2023-09-13
最終更新日2024-01-03
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Dual species sphingosine-1-phosphate lyase inhibitors to combine antifungal and anti-inflammatory activities in cystic fibrosis: a feasibility study.
Sci Rep, 13, 2023
5O5C
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The crystal structure of DfoJ, the desferrioxamine biosynthetic pathway lysine decarboxylase from the fire blight disease pathogen Erwinia amylovora
分子名称: PYRIDOXAL-5'-PHOSPHATE, Putative decarboxylase involved in desferrioxamine biosynthesis
著者Salomone-Stagni, M, Bartho, J.D, Polsinelli, I, Bellini, D, Walsh, M.A, Demitri, N, Benini, S.
登録日2017-06-01
公開日2018-02-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A complete structural characterization of the desferrioxamine E biosynthetic pathway from the fire blight pathogen Erwinia amylovora.
J. Struct. Biol., 202, 2018
7JZH
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The Cryo-EM structure of the Glutamate decarboxylase from Escherichia coli
分子名称: Glutamate decarboxylase
著者Su, C.-C.
登録日2020-09-02
公開日2021-01-20
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.59 Å)
主引用文献A 'Build and Retrieve' methodology to simultaneously solve cryo-EM structures of membrane proteins.
Nat.Methods, 18, 2021
1XEY
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BU of 1xey by Molmil
Crystal structure of the complex of Escherichia coli GADA with glutarate at 2.05 A resolution
分子名称: ACETATE ION, GLUTARIC ACID, Glutamate decarboxylase alpha, ...
著者Dutyshev, D.I, Darii, E.L, Fomenkova, N.P, Pechik, I.V, Polyakov, K.M, Nikonov, S.V, Andreeva, N.S, Sukhareva, B.S.
登録日2004-09-13
公開日2004-10-05
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structure of Escherichia coli glutamate decarboxylase (GADalpha) in complex with glutarate at 2.05 angstroms resolution.
Acta Crystallogr.,Sect.D, 61, 2005
4RM1
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BU of 4rm1 by Molmil
The crystal structure of Y333Q mutant pyridoxal-dependent decarboxylase from Sphaerobacter thermophilus DSM 20745
分子名称: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, CHLORIDE ION, GLYCEROL, ...
著者Wu, R, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2014-10-18
公開日2014-11-12
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献The crystal structure of Y333Q mutant pyridoxal-dependent decarboxylase from Sphaerobacter thermophilus DSM 20745
To be Published
6ZEK
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BU of 6zek by Molmil
Crystal structure of mouse CSAD
分子名称: CHLORIDE ION, COBALT (II) ION, Cysteine sulfinic acid decarboxylase, ...
著者Mahootchi, E, Raasakka, A, Haavik, J, Kursula, P.
登録日2020-06-16
公開日2021-04-28
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure and substrate specificity determinants of the taurine biosynthetic enzyme cysteine sulphinic acid decarboxylase.
J.Struct.Biol., 213, 2021
4RLG
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BU of 4rlg by Molmil
The clear crystal structure of pyridoxal-dependent decarboxylase from sphaerobacter thermophilus dsm 20745
分子名称: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, GAMMA-AMINO-BUTANOIC ACID, GLYCEROL, ...
著者Wu, R, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2014-10-16
公開日2014-10-29
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.901 Å)
主引用文献The clear crystal structure of pyridoxal-dependent decarboxylase from sphaerobacter thermophilus dsm 20745
TO BE PUBLISHED
1PMM
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BU of 1pmm by Molmil
Crystal structure of Escherichia coli GadB (low pH)
分子名称: ACETIC ACID, Glutamate decarboxylase beta, PYRIDOXAL-5'-PHOSPHATE
著者Capitani, G, De Biase, D, Aurizi, C, Gut, H, Bossa, F, Grutter, M.G.
登録日2003-06-11
公開日2004-02-17
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure and functional analysis of escherichia coli glutamate decarboxylase
Embo J., 22, 2003
7A0A
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BU of 7a0a by Molmil
Crystal structure of mouse CSAD in apo form
分子名称: Cysteine sulfinic acid decarboxylase, SODIUM ION, SULFATE ION
著者Mahootchi, E, Raasakka, A, Haavik, J, Kursula, P.
登録日2020-08-07
公開日2021-08-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The structure of cysteine sulphinic acid decarboxylase reveals structural determinants for substrate specificity of pyridoxal phosphate-dependent decarboxylases
To be published
1JS6
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Crystal Structure of DOPA decarboxylase
分子名称: DOPA decarboxylase, PYRIDOXAL-5'-PHOSPHATE
著者Burkhard, P, Dominici, P, Borri-Voltattorni, C, Jansonius, J.N, Malashkevich, V.N.
登録日2001-08-16
公開日2001-10-26
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural insight into Parkinson's disease treatment from drug-inhibited DOPA decarboxylase.
Nat.Struct.Biol., 8, 2001
3HBX
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BU of 3hbx by Molmil
Crystal structure of GAD1 from Arabidopsis thaliana
分子名称: Glutamate decarboxylase 1
著者Gut, H, Dominici, P, Pilati, S, Gruetter, M.G, Capitani, G.
登録日2009-05-05
公開日2009-07-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.672 Å)
主引用文献A common structural basis for pH- and calmodulin-mediated regulation in plant glutamate decarboxylase.
J.Mol.Biol., 392, 2009
5EUE
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BU of 5eue by Molmil
S1P Lyase Bacterial Surrogate bound to N-(2-((4-methoxy-2,5-dimethylbenzyl)amino)-1-phenylethyl)-5-methylisoxazole-3-carboxamide
分子名称: PHOSPHATE ION, Putative sphingosine-1-phosphate lyase, ~{N}-[(1~{S})-2-[(4-methoxy-2,5-dimethyl-phenyl)methylamino]-1-phenyl-ethyl]-5-methyl-1,2-oxazole-3-carboxamide
著者Argiriadi, M.A, Banach, D, Radziejewska, E, Marchie, S, DiMauro, J, Dinges, J, Dominguez, E, Hutchins, C, Judge, R.A, Queeney, K, Wallace, G, Harris, C.M.
登録日2015-11-18
公開日2016-03-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.83 Å)
主引用文献Creation of a S1P Lyase bacterial surrogate for structure-based drug design.
Bioorg.Med.Chem.Lett., 26, 2016
5EUD
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S1P Lyase Bacterial Surrogate bound to N-(1-(4-(3-hydroxyprop-1-yn-1-yl)phenyl)-2-((4-methoxy-2,5-dimethylbenzyl)amino)ethyl)-5-methylisoxazole-3-carboxamide
分子名称: PHOSPHATE ION, Putative sphingosine-1-phosphate lyase, ~{N}-[(1~{S})-2-[(4-methoxy-2,5-dimethyl-phenyl)methylamino]-1-[4-(3-oxidanylprop-1-ynyl)phenyl]ethyl]-5-methyl-1,2-oxazole-3-carboxamide
著者Argiriadi, M.A, Banach, D, Radziejewska, E, Marchie, S, DiMauro, J, Dinges, J, Dominguez, E, Hutchins, C, Judge, R.A, Queeney, K, Wallace, G, Harris, C.M.
登録日2015-11-18
公開日2016-03-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Creation of a S1P Lyase bacterial surrogate for structure-based drug design.
Bioorg.Med.Chem.Lett., 26, 2016
3K40
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Crystal structure of Drosophila 3,4-dihydroxyphenylalanine decarboxylase
分子名称: Aromatic-L-amino-acid decarboxylase, GLYCEROL
著者Han, Q, Ding, H, Robinson, H, Christensen, B.M, Li, J.
登録日2009-10-05
公開日2010-02-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure and substrate specificity of Drosophila 3,4-dihydroxyphenylalanine decarboxylase
Plos One, 5, 2010
1JS3
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Crystal structure of dopa decarboxylase in complex with the inhibitor carbidopa
分子名称: CARBIDOPA, DOPA decarboxylase, PYRIDOXAL-5'-PHOSPHATE, ...
著者Burkhard, P, Dominici, P, Borri-Voltattorni, C, Jansonius, J.N, Malashkevich, V.N.
登録日2001-08-16
公開日2001-10-26
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural insight into Parkinson's disease treatment from drug-inhibited DOPA decarboxylase.
Nat.Struct.Biol., 8, 2001
1PMO
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Crystal structure of Escherichia coli GadB (neutral pH)
分子名称: (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Glutamate decarboxylase beta
著者Capitani, G, De Biase, D, Aurizi, C, Gut, H, Bossa, F, Grutter, M.G.
登録日2003-06-11
公開日2004-02-17
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure and functional analysis of escherichia coli glutamate decarboxylase
Embo J., 22, 2003
2DGL
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BU of 2dgl by Molmil
Crystal structure of Escherichia coli GadB in complex with bromide
分子名称: ACETIC ACID, BROMIDE ION, Glutamate decarboxylase beta, ...
著者Gruetter, M.G, Capitani, G, Gut, H.
登録日2006-03-14
公開日2006-06-20
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Escherichia coli acid resistance: pH-sensing, activation by chloride and autoinhibition in GadB
Embo J., 25, 2006
2DGM
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BU of 2dgm by Molmil
Crystal structure of Escherichia coli GadB in complex with iodide
分子名称: ACETIC ACID, DI(HYDROXYETHYL)ETHER, FORMIC ACID, ...
著者Gruetter, M.G, Capitani, G, Gut, H.
登録日2006-03-14
公開日2006-06-20
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Escherichia coli acid resistance: pH-sensing, activation by chloride and autoinhibition in GadB
Embo J., 25, 2006

 

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