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8OW1
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BU of 8ow1 by Molmil
Cryo-EM structure of the yeast Inner kinetochore bound to a CENP-A nucleosome.
分子名称: C0N3, Centromere DNA-binding protein complex CBF3 subunit B, Centromere DNA-binding protein complex CBF3 subunit C, ...
著者Dendooven, T.D, Zhang, Z, Yang, J, McLaughlin, S, Schwabb, J, Scheres, S, Yatskevich, S, Barford, D.
登録日2023-04-26
公開日2023-08-09
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Cryo-EM structure of the complete inner kinetochore of the budding yeast point centromere.
Sci Adv, 9, 2023
7UIO
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BU of 7uio by Molmil
Mediator-PIC Early (Composite Model)
分子名称: ALANINE, ASPARTIC ACID, DNA (37-MER), ...
著者Gorbea Colon, J.J, Chen, S.-F, Tsai, K.L, Murakami, K.
登録日2022-03-29
公開日2023-03-01
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural basis of a transcription pre-initiation complex on a divergent promoter.
Mol.Cell, 83, 2023
7UIK
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BU of 7uik by Molmil
Mediator-PIC Early (Tail A + Upstream DNA & Activator)
分子名称: DNA (37-MER), DNA (38-MER), Mediator of RNA polymerase II transcription subunit 14, ...
著者Gorbea Colon, J.J, Chen, S.-F, Tsai, K.L, Murakami, K.
登録日2022-03-29
公開日2023-03-01
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (7.7 Å)
主引用文献Structural basis of a transcription pre-initiation complex on a divergent promoter.
Mol.Cell, 83, 2023
7K7G
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BU of 7k7g by Molmil
nucleosome and Gal4 complex
分子名称: Centromere DNA-binding protein complex CBF3 subunit B, DNA (147-MER), Histone H2A.1, ...
著者Ruifang, G, Yawen, B.
登録日2020-09-22
公開日2021-03-31
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structural and dynamic mechanisms of CBF3-guided centromeric nucleosome formation.
Nat Commun, 12, 2021
7K79
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BU of 7k79 by Molmil
CBF3
分子名称: Centromere DNA-binding protein complex CBF3 subunit B, Centromere DNA-binding protein complex CBF3 subunit C, Suppressor of kinetochore protein 1
著者Ruifang, G, Yawen, B.
登録日2020-09-22
公開日2021-03-31
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structural and dynamic mechanisms of CBF3-guided centromeric nucleosome formation.
Nat Commun, 12, 2021
6V92
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BU of 6v92 by Molmil
RSC-NCP
分子名称: Actin-like protein ARP9, Actin-related protein 7, Chromatin structure-remodeling complex protein RSC14, ...
著者Patel, A.B, Moore, C.M, Greber, B.J, Nogales, E.
登録日2019-12-13
公開日2020-01-15
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (20 Å)
主引用文献Architecture of the chromatin remodeler RSC and insights into its nucleosome engagement.
Elife, 8, 2019
6V8O
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BU of 6v8o by Molmil
RSC core
分子名称: Chromatin structure-remodeling complex protein RSC14, Chromatin structure-remodeling complex protein RSC3, Chromatin structure-remodeling complex protein RSC30, ...
著者Patel, A.B, Moore, C.M, Greber, B.J, Nogales, E.
登録日2019-12-11
公開日2020-01-15
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.07 Å)
主引用文献Architecture of the chromatin remodeler RSC and insights into its nucleosome engagement.
Elife, 8, 2019
6P7X
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BU of 6p7x by Molmil
Structure of the K. lactis CBF3 core - Ndc10 D1D2 complex
分子名称: Cep3, Ctf13, Ndc10, ...
著者Lee, P.D, Wei, H, Tan, D, Harrison, S.C.
登録日2019-06-06
公開日2019-09-18
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Structure of the Centromere Binding Factor 3 Complex from Kluyveromyces lactis.
J.Mol.Biol., 431, 2019
6P7W
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BU of 6p7w by Molmil
Structure of the K. lactis CBF3 core - Ndc10 D1 complex
分子名称: Cep3, Ctf13, Ndc10, ...
著者Lee, P.D, Wei, H, Tan, D, Harrison, S.C.
登録日2019-06-06
公開日2019-09-18
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structure of the Centromere Binding Factor 3 Complex from Kluyveromyces lactis.
J.Mol.Biol., 431, 2019
6P7V
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BU of 6p7v by Molmil
Structure of the K. lactis CBF3 core
分子名称: Cep3, Ctf13, Skp1
著者Lee, P.D, Wei, H, Tan, D, Harrison, S.C.
登録日2019-06-06
公開日2019-09-11
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structure of the Centromere Binding Factor 3 Complex from Kluyveromyces lactis.
J.Mol.Biol., 431, 2019
6KW5
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BU of 6kw5 by Molmil
The ClassC RSC-Nucleosome Complex
分子名称: Actin-like protein ARP9, Actin-related protein 7, Chromatin structure-remodeling complex protein RSC3, ...
著者Ye, Y.P, Wu, H, Chen, K.J, Verma, N, Cairns, B, Gao, N, Chen, Z.C.
登録日2019-09-06
公開日2020-09-09
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (10.13 Å)
主引用文献Structure of the RSC complex bound to the nucleosome
To Be Published
6KW4
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BU of 6kw4 by Molmil
The ClassB RSC-Nucleosome Complex
分子名称: Actin-like protein ARP9, Actin-related protein 7, Chromatin structure-remodeling complex protein RSC3, ...
著者Ye, Y.P, Wu, H, Chen, K.J, Verma, N, Cairns, B, Gao, N, Chen, Z.C.
登録日2019-09-06
公開日2019-11-13
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (7.55 Å)
主引用文献Structure of the RSC complex bound to the nucleosome.
Science, 366, 2019
6KW3
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BU of 6kw3 by Molmil
The ClassA RSC-Nucleosome Complex
分子名称: Actin-like protein ARP9, Actin-related protein 7, Chromatin structure-remodeling complex protein RSC3, ...
著者Ye, Y.P, Wu, H, Chen, K.J, Verma, N, Cairns, B, Gao, N, Chen, Z.C.
登録日2019-09-05
公開日2019-11-13
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (7.13 Å)
主引用文献Structure of the RSC complex bound to the nucleosome.
Science, 366, 2019
6K15
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BU of 6k15 by Molmil
RSC substrate-recruitment module
分子名称: Chromatin structure-remodeling complex protein RSC3, Chromatin structure-remodeling complex protein RSC30, Chromatin structure-remodeling complex protein RSC58, ...
著者Ye, Y.P, Wu, H, Chen, K.J, Verma, N, Cairns, B, Gao, N, Chen, Z.C.
登録日2019-05-09
公開日2019-11-13
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure of the RSC complex bound to the nucleosome.
Science, 366, 2019
6GYU
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BU of 6gyu by Molmil
Cryo-EM structure of the CBF3-msk complex of the budding yeast kinetochore
分子名称: Centromere DNA-binding protein complex CBF3 subunit A, Centromere DNA-binding protein complex CBF3 subunit B, Centromere DNA-binding protein complex CBF3 subunit C, ...
著者Yan, K, Zhang, Z, Yang, J, McLaughlin, S.H, Barford, D.
登録日2018-07-02
公開日2018-12-05
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Architecture of the CBF3-centromere complex of the budding yeast kinetochore.
Nat. Struct. Mol. Biol., 25, 2018
6GYS
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BU of 6gys by Molmil
Cryo-EM structure of the CBF3-CEN3 complex of the budding yeast kinetochore
分子名称: Centromere DNA-binding protein complex CBF3 subunit A, Centromere DNA-binding protein complex CBF3 subunit B, Centromere DNA-binding protein complex CBF3 subunit C, ...
著者Yan, K, Zhang, Z, Yang, J, McLaughlin, S.H, Barford, D.
登録日2018-07-01
公開日2018-12-05
最終更新日2019-12-11
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Architecture of the CBF3-centromere complex of the budding yeast kinetochore.
Nat. Struct. Mol. Biol., 25, 2018
6GYP
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BU of 6gyp by Molmil
Cryo-EM structure of the CBF3-core-Ndc10-DBD complex of the budding yeast kinetochore
分子名称: ARGININE, ASPARAGINE, Centromere DNA-binding protein complex CBF3 subunit A, ...
著者Yan, K, Zhang, Z, Yang, J, McLaughlin, S.H, Barford, D.
登録日2018-07-01
公開日2018-12-05
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Architecture of the CBF3-centromere complex of the budding yeast kinetochore.
Nat. Struct. Mol. Biol., 25, 2018
6F07
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BU of 6f07 by Molmil
CBF3 Core Complex
分子名称: Centromere DNA-binding protein complex CBF3 subunit B, Suppressor of kinetochore protein 1, ZINC ION
著者Leber, V, Singleton, M.R.
登録日2017-11-17
公開日2017-12-13
最終更新日2019-12-11
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural basis for assembly of the CBF3 kinetochore complex.
EMBO J., 37, 2018
3COQ
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BU of 3coq by Molmil
Structural Basis for Dimerization in DNA Recognition by Gal4
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, DNA (5'-D(*DAP*DCP*DCP*DGP*DGP*DAP*DGP*DGP*DAP*DCP*DAP*DGP*DTP*DCP*DCP*DTP*DCP*DCP*DGP*DG)-3'), DNA (5'-D(*DTP*DCP*DCP*DGP*DGP*DAP*DGP*DGP*DAP*DCP*DTP*DGP*DTP*DCP*DCP*DTP*DCP*DCP*DGP*DG)-3'), ...
著者Hong, M, Fitzgerald, M.X, Harper, S, Luo, C, Speicher, D.W.
登録日2008-03-29
公開日2008-07-01
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for dimerization in DNA recognition by gal4.
Structure, 16, 2008
3ALC
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BU of 3alc by Molmil
ETHANOL REGULON TRANSCRIPTIONAL ACTIVATOR DNA-BINDING DOMAIN FROM ASPERGILLUS NIDULANS
分子名称: PROTEIN (ETHANOL REGULON TRANSCRIPTIONAL ACTIVATOR), ZINC ION
著者Cerdan, R, Cahuzac, B, Felenbok, B, Guittet, E.
登録日1999-03-11
公開日2000-05-15
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献NMR solution structure of AlcR (1-60) provides insight in the unusual DNA binding properties of this zinc binuclear cluster protein.
J.Mol.Biol., 295, 2000
2HAP
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BU of 2hap by Molmil
STRUCTURE OF A HAP1-18/DNA COMPLEX REVEALS THAT PROTEIN/DNA INTERACTIONS CAN HAVE DIRECT ALLOSTERIC EFFECTS ON TRANSCRIPTIONAL ACTIVATION
分子名称: DNA (5'-D(*AP*CP*GP*CP*TP*AP*TP*TP*AP*TP*CP*GP*CP*TP*AP*TP*TP*AP*GP*T)-3'), DNA (5'-D(*AP*CP*TP*AP*AP*TP*AP*GP*CP*GP*AP*TP*AP*AP*TP*AP*GP*CP*GP*T)-3'), PROTEIN (HEME ACTIVATOR PROTEIN), ...
著者King, D.A, Zhang, L, Guarente, L, Marmorstein, R.
登録日1998-09-17
公開日1999-11-10
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of HAP1-18-DNA implicates direct allosteric effect of protein-DNA interactions on transcriptional activation.
Nat.Struct.Biol., 6, 1999
2ERG
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BU of 2erg by Molmil
Crystal Structure of Leu3 DNA-binding domain with a single H50C mutation complexed with a 15mer DNA duplex
分子名称: 5'-D(*TP*TP*GP*CP*CP*GP*GP*TP*AP*CP*CP*GP*GP*CP*A)-3', Regulatory protein LEU3, ZINC ION
著者Fitzgerald, M.X, Marmorstein, R.
登録日2005-10-24
公開日2006-04-04
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Structure of a Leu3-DNA complex: recognition of everted CGG half-sites by a Zn2Cys6 binuclear cluster protein.
Structure, 14, 2006
2ERE
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BU of 2ere by Molmil
Crystal Structure of a Leu3 DNA-binding domain complexed with a 15mer DNA duplex
分子名称: 5'-D(*TP*TP*GP*CP*CP*GP*GP*TP*AP*CP*CP*GP*GP*CP*A)-3', Regulatory protein LEU3, ZINC ION
著者Fitzgerald, M.X, Marmorstein, R.
登録日2005-10-24
公開日2006-04-04
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure of a Leu3-DNA complex: recognition of everted CGG half-sites by a Zn2Cys6 binuclear cluster protein.
Structure, 14, 2006
2ER8
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BU of 2er8 by Molmil
Crystal Structure of Leu3 DNA-binding domain complexed with a 12mer DNA duplex
分子名称: 5'-D(*CP*CP*CP*GP*GP*TP*AP*CP*CP*GP*GP*G)-3', Regulatory protein LEU3, ZINC ION
著者Fitzgerald, M.X, Marmorstein, R.
登録日2005-10-24
公開日2006-04-04
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structure of a Leu3-DNA complex: recognition of everted CGG half-sites by a Zn2Cys6 binuclear cluster protein.
Structure, 14, 2006
2ALC
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BU of 2alc by Molmil
ETHANOL REGULON TRANSCRIPTIONAL ACTIVATOR DNA-BINDING DOMAIN FROM ASPERGILLUS NIDULANS
分子名称: PROTEIN (ETHANOL REGULON TRANSCRIPTIONAL ACTIVATOR), ZINC ION
著者Cerdan, R, Cahuzac, B, Felenbok, B, Guittet, E.
登録日1999-01-20
公開日2000-01-21
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献NMR solution structure of AlcR (1-60) provides insight in the unusual DNA binding properties of this zinc binuclear cluster protein.
J.Mol.Biol., 295, 2000

 

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