PDB: 47720 件ウェブページステータス検索Chemie searchBIRD

---

7JYY	Crystal Structure of SARS-CoV-2 Nsp16/10 Heterodimer in Complex with (m7GpppA)pUpUpApApA (Cap-0) and S-Adenosylmethionine (SAM). 分子名称: 2'-O-methyltransferase, CHLORIDE ION, FORMIC ACID, ... 著者 Minasov, G, Shuvalova, L, Rosas-Lemus, M, Kiryukhina, O, Brunzelle, J.S, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2020-09-01 公開日 2020-09-16 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Mn 2+ coordinates Cap-0-RNA to align substrates for efficient 2'- O -methyl transfer by SARS-CoV-2 nsp16. Sci.Signal., 14, 2021
6BUP	Crystal structures of cyanuric acid hydrolase from Moorella thermoacetica complexed with cyanuric acid 分子名称: 1,3,5-triazine-2,4,6-triol, 1,3-PROPANDIOL, CALCIUM ION, ... 著者 Shi, K, Aihara, H. 登録日 2017-12-11 公開日 2019-06-12 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.88 Å) 主引用文献 Crystal structures of Moorella thermoacetica cyanuric acid hydrolase reveal conformational flexibility and asymmetry important for catalysis. Plos One, 14, 2019
2Q2U	Structure of Chlorella virus DNA ligase-product DNA complex 分子名称: 5'-D(*AP*TP*TP*GP*CP*GP*AP*CP*(OMC)P*CP*CP*AP*CP*TP*AP*TP*CP*GP*GP*AP*A)-3', 5'-D(*TP*TP*CP*CP*GP*AP*TP*AP*GP*TP*GP*GP*GP*GP*TP*CP*GP*CP*AP*AP*T)-3', Chlorella virus DNA ligase 著者 Lima, C.D, Nandakumar, J, Nair, P.A, Smith, P, Shuman, S. 登録日 2007-05-29 公開日 2007-07-10 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structural basis for nick recognition by a minimal pluripotent DNA ligase. Nat.Struct.Mol.Biol., 14, 2007
6BL8	Predicting the Conformational Variability of Abl Tyrosine Kinase Using Molecular Dynamics Simulations and Markov State Models 分子名称: PURVALANOL B, SULFATE ION, Tyrosine-protein kinase ABL1 著者 Clawson, D.K, Gao, C. 登録日 2017-11-09 公開日 2018-03-07 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Predicting the Conformational Variability of Abl Tyrosine Kinase using Molecular Dynamics Simulations and Markov State Models. J Chem Theory Comput, 14, 2018
6BN7	Crystal structure of DDB1-CRBN-BRD4(BD1) complex bound to dBET23 PROTAC. 分子名称: Bromodomain-containing protein 4, DNA damage-binding protein 1, Protein cereblon, ... 著者 Nowak, R.P, DeAngelo, S.L, Buckley, D, Bradner, J.E, Fischer, E.S. 登録日 2017-11-16 公開日 2018-05-30 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (3.501 Å) 主引用文献 Plasticity in binding confers selectivity in ligand-induced protein degradation. Nat. Chem. Biol., 14, 2018
6BUO	Crystal structures of cyanuric acid hydrolase from Moorella thermoacetica 分子名称: 1,3-PROPANDIOL, CALCIUM ION, Cyanuric acid amidohydrolase, ... 著者 Shi, K, Aihara, H. 登録日 2017-12-11 公開日 2019-06-12 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Crystal structures of Moorella thermoacetica cyanuric acid hydrolase reveal conformational flexibility and asymmetry important for catalysis. Plos One, 14, 2019
5NO7	Crystal Structure of a Xylan-active Lytic Polysaccharide Monooxygenase from Pycnoporus coccineus. 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Lytic polysaccharide monooxygenase, SULFATE ION, ... 著者 Ladeveze, S, Couturier, M, Sulzenbacher, G, Berrin, J.-G. 登録日 2017-04-11 公開日 2018-01-17 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (3.01 Å) 主引用文献 Lytic xylan oxidases from wood-decay fungi unlock biomass degradation. Nat. Chem. Biol., 14, 2018
6BOY	Crystal structure of DDB1-CRBN-BRD4(BD1) complex bound to dBET6 PROTAC. 分子名称: 2-[(6S)-4-(4-chlorophenyl)-2,3,9-trimethyl-6H-thieno[3,2-f][1,2,4]triazolo[4,3-a][1,4]diazepin-6-yl]-N-(8-{[({2-[(3S)-2,6-dioxopiperidin-3-yl]-1,3-dioxo-2,3-dihydro-1H-isoindol-4-yl}oxy)acetyl]amino}octyl)acetamide, Bromodomain-containing protein 4, DNA damage-binding protein 1, ... 著者 Nowak, R.P, DeAngelo, S.L, Buckley, D, Bradner, J.E, Fischer, E.S. 登録日 2017-11-21 公開日 2018-05-30 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (3.33 Å) 主引用文献 Plasticity in binding confers selectivity in ligand-induced protein degradation. Nat. Chem. Biol., 14, 2018
6BPT	Crystal structure of ferrous form of the uncrosslinked F2-Tyr157 human cysteine dioxygenase 分子名称: Cysteine dioxygenase type 1, FE (II) ION, GLYCEROL, ... 著者 Liu, A, Li, J, Shin, I. 登録日 2017-11-26 公開日 2018-07-04 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.402 Å) 主引用文献 Cleavage of a carbon-fluorine bond by an engineered cysteine dioxygenase. Nat. Chem. Biol., 14, 2018
5NQ3	'Porcine (Sus scrofa) Major Histocompatibility Complex, class I, with human beta2 micro globulin, presenting EFEDLTFLA 分子名称: 1,2-ETHANEDIOL, Beta-2-microglobulin, GLU-PHE-GLU-ASP-LEU-THR-PHE-LEU-ALA, ... 著者 Rizkallah, P.J, Tungatt, K, Sewell, A.K. 登録日 2017-04-19 公開日 2018-04-25 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.57 Å) 主引用文献 Induction of influenza-specific local CD8 T-cells in the respiratory tract after aerosol delivery of vaccine antigen or virus in the Babraham inbred pig. Plos Pathog., 14, 2018
5NQ0	Porcine (Sus scrofa) Major Histocompatibility Complex, class I, presenting DFEREGYSL 分子名称: 1,2-ETHANEDIOL, ASP-PHE-GLU-ARG-GLU-GLY-TYR-SER-LEU, Beta-2-microglobulin, ... 著者 Rizkallah, P.J, Tungatt, K, Sewell, A.K. 登録日 2017-04-19 公開日 2018-04-25 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 Induction of influenza-specific local CD8 T-cells in the respiratory tract after aerosol delivery of vaccine antigen or virus in the Babraham inbred pig. Plos Pathog., 14, 2018
6C4X	Cross-alpha Amyloid-like Structure alphaAmmem 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ZINC ION, cross-alpha amyloid-like membrane peptide alpha-AmMEM 著者 Liu, L, Zhang, S.Q. 登録日 2018-01-13 公開日 2018-08-15 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (3.55 Å) 主引用文献 Designed peptides that assemble into cross-alpha amyloid-like structures. Nat. Chem. Biol., 14, 2018
8X0V	Crystal structure of cupin-like fold protein StrC in complex with substrate analogue from Stachybotrys sp.g12 分子名称: (5~{R})-2-(hydroxymethyl)-3-[(~{E})-non-3-enyl]-5-oxidanyl-cyclohex-2-en-1-one, Cupin conserved barrel domain protein 著者 Wang, H, Wang, W.G. 登録日 2023-11-06 公開日 2024-09-11 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structural and Computational Insights into the Noncanonical Aromatization in Fungal Polyketide Biosynthesis Acs Catalysis, 14, 2024
8X0U	Crystal structure of cupin-like fold protein StrC from Stachybotrys sp.g12 分子名称: Cupin conserved barrel domain protein 著者 Wang, H, Wang, W.G. 登録日 2023-11-06 公開日 2024-09-11 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Structural and Computational Insights into the Noncanonical Aromatization in Fungal Polyketide Biosynthesis Acs Catalysis, 14, 2024
2QRI	Crystal structure of a single chain trimer composed of the MHC I heavy chain H-2Kb WT, beta-2microglobulin, and ovalbumin-derived peptide. 分子名称: H-2 class I histocompatibility antigen K-B alpha chain, Beta-2 microglobulin, ovalbumin-derived peptide 著者 Mitaksov, V.E, Fremont, D.H. 登録日 2007-07-28 公開日 2007-11-06 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural engineering of pMHC reagents for T cell vaccines and diagnostics. Chem.Biol., 14, 2007
6BPW	Crystal structure of ferrous form of the Cl2-Tyr157 human cysteine dioxygenase with both uncrosslinked and crosslinked cofactor 分子名称: Cysteine dioxygenase type 1, FE (II) ION, GLYCEROL, ... 著者 Liu, A, Li, J, Shin, I. 登録日 2017-11-26 公開日 2018-07-04 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.43 Å) 主引用文献 Cleavage of a carbon-fluorine bond by an engineered cysteine dioxygenase. Nat. Chem. Biol., 14, 2018
6BQE	Low-resolution structure of cyclohexadienyl dehydratase from Pseudomonas aeruginosa in space group P4322. 分子名称: ACETATE ION, Arogenate dehydratase 著者 Clifton, B.E, Carr, P.D, Jackson, C.J. 登録日 2017-11-27 公開日 2017-12-13 最終更新日 2018-05-30 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Evolution of cyclohexadienyl dehydratase from an ancestral solute-binding protein. Nat. Chem. Biol., 14, 2018
6C4Z	Cross-alpha Amyloid-like Structure alphaAmG - low resolution 分子名称: Cross-alpha Amyloid-like Structure alphaAmG - low resolution 著者 Liu, L, Zhang, S.Q. 登録日 2018-01-13 公開日 2018-08-15 最終更新日 2019-12-18 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Designed peptides that assemble into cross-alpha amyloid-like structures. Nat. Chem. Biol., 14, 2018
6BN8	Crystal structure of DDB1-CRBN-BRD4(BD1) complex bound to dBET55 PROTAC. 分子名称: Bromodomain-containing protein 4, DNA damage-binding protein 1,DNA damage-binding protein 1, Protein cereblon, ... 著者 Nowak, R.P, DeAngelo, S.L, Buckley, D, Bradner, J.E, Fischer, E.S. 登録日 2017-11-16 公開日 2018-06-06 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (3.990035 Å) 主引用文献 Plasticity in binding confers selectivity in ligand-induced protein degradation. Nat. Chem. Biol., 14, 2018
5O9S	HsNMT1 in complex with CoA and Myristoylated-GKSNSKLK octapeptide 分子名称: CHLORIDE ION, GLYCEROL, Glycylpeptide N-tetradecanoyltransferase 1, ... 著者 Dian, C, Meinnel, T, Giglione, C. 登録日 2017-06-20 公開日 2018-06-27 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural and genomic decoding of human and plant myristoylomes reveals a definitive recognition pattern. Nat. Chem. Biol., 14, 2018
6BPS	Crystal structure of cysteine-bound ferrous form of the uncrosslinked F2-Tyr157 human cysteine dioxygenase 分子名称: CYSTEINE, Cysteine dioxygenase type 1, FE (II) ION, ... 著者 Liu, A, Li, J, Shin, I. 登録日 2017-11-26 公開日 2018-07-04 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Cleavage of a carbon-fluorine bond by an engineered cysteine dioxygenase. Nat. Chem. Biol., 14, 2018
6BPV	Crystal structure of cysteine-bound ferrous form of the matured F2-Tyr157 human cysteine dioxygenase 分子名称: CYSTEINE, Cysteine dioxygenase type 1, FE (II) ION, ... 著者 Liu, A, Li, J, Shin, I. 登録日 2017-11-26 公開日 2018-07-04 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Cleavage of a carbon-fluorine bond by an engineered cysteine dioxygenase. Nat. Chem. Biol., 14, 2018
5NVG	Thr12 Phosphorylated Ubiquitin 分子名称: DI(HYDROXYETHYL)ETHER, PHOSPHATE ION, Polyubiquitin-B 著者 Huguenin-Dezot, N. 登録日 2017-05-04 公開日 2017-05-31 最終更新日 2017-09-13 実験手法 X-RAY DIFFRACTION (1.07 Å) 主引用文献 Biosynthesis and genetic encoding of phosphothreonine through parallel selection and deep sequencing. Nat. Methods, 14, 2017
2QRT	Crystal Structure of a disulfide trapped single chain trimer composed of the MHC I heavy chain H-2Kb Y84C, beta-2microglobulin, and ovalbumin-derived peptide. 分子名称: H-2 class I histocompatibility antigen K-B alpha chain, Beta-2 microglobulin, ovalbumin-derived peptide 著者 Mitaksov, V.E, Fremont, D.H. 登録日 2007-07-29 公開日 2007-11-06 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural engineering of pMHC reagents for T cell vaccines and diagnostics. Chem.Biol., 14, 2007
3IBF	Crystal structure of unliganded caspase-7 分子名称: Caspase-7 著者 Agniswamy, J. 登録日 2009-07-15 公開日 2009-09-01 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Conformational similarity in the activation of caspase-3 and -7 revealed by the unliganded and inhibited structures of caspase-7. Apoptosis, 14, 2009

<90919293949596979899100101102103104105>