Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5GJO
DownloadVisualize
BU of 5gjo by Molmil
Crystal structure of SrLDC mutant (A225C/T302C) in complex with PLP
分子名称: GLYCEROL, Lysine/ornithine decarboxylase, PYRIDOXAL-5'-PHOSPHATE, ...
著者Sagong, H.-Y, Kim, K.-J.
登録日2016-07-01
公開日2017-05-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Lysine Decarboxylase with an Enhanced Affinity for Pyridoxal 5-Phosphate by Disulfide Bond-Mediated Spatial Reconstitution
PLoS ONE, 12, 2017
6FXQ
DownloadVisualize
BU of 6fxq by Molmil
Structure of coproheme decarboxylase from Listeria monocytogenes during turnover
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,3,5,8-TETRAMETHYL-PORPHINE-2,4,6,7-TETRAPROPIONIC ACID FERROUS COMPLEX, Putative heme-dependent peroxidase lmo2113, ...
著者Hofbauer, S, Pfanzagl, V, Mlynek, G, Puehringer, D.
登録日2018-03-09
公開日2019-07-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Redox Cofactor Rotates during Its Stepwise Decarboxylation: Molecular Mechanism of Conversion of Coproheme to Hemeb.
Acs Catalysis, 9, 2019
3ZNB
DownloadVisualize
BU of 3znb by Molmil
METALLO-BETA-LACTAMASE (ZN, HG-BOUND FORM)
分子名称: MERCURY (II) ION, METALLO-BETA-LACTAMASE, SODIUM ION, ...
著者Concha, N.O, Herzberg, O.
登録日1997-10-15
公開日1998-01-28
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structures of the cadmium- and mercury-substituted metallo-beta-lactamase from Bacteroides fragilis.
Protein Sci., 6, 1997
6TOP
DownloadVisualize
BU of 6top by Molmil
Structure of the PorE C-terminal domain, a protein of T9SS from Porphyromonas gingivalis
分子名称: GLCNAC(BETA1-4)-MURNAC(1,6-ANHYDRO)-L-ALA-GAMMA-D-GLU-MESO-A2PM-D-ALA, OmpA family protein, SODIUM ION
著者Trinh, T.N, Cambillau, C, Roussel, A, Leone, P.
登録日2019-12-11
公開日2020-06-17
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal structure of Type IX secretion system PorE C-terminal domain from Porphyromonas gingivalis in complex with a peptidoglycan fragment.
Sci Rep, 10, 2020
3N81
DownloadVisualize
BU of 3n81 by Molmil
T244A mutant of Human mitochondrial aldehyde dehydrogenase, apo form
分子名称: 1,2-ETHANEDIOL, Aldehyde dehydrogenase, mitochondrial, ...
著者Gonzalez-Segura, L, Hurley, T.D.
登録日2010-05-27
公開日2011-04-13
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Conformational Selection During Catalysis: The role of Threonine 244 in ALDH2
To be published
6RJB
DownloadVisualize
BU of 6rjb by Molmil
Human transketolase variant T382E
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Rabe von Pappenheim, F, Tittmann, K.
登録日2019-04-26
公開日2019-09-11
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Low-barrier hydrogen bonds in enzyme cooperativity.
Nature, 573, 2019
6FUE
DownloadVisualize
BU of 6fue by Molmil
Periplasmic coiled coil domain of the FapF amyloid transporter
分子名称: FapF, ISOPROPYL ALCOHOL, SODIUM ION, ...
著者Rouse, S.L, Stylianou, F, Morgan, R.M.L, Matthews, S.J.
登録日2018-02-26
公開日2018-06-20
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献The FapF Amyloid Secretion Transporter Possesses an Atypical Asymmetric Coiled Coil.
J. Mol. Biol., 430, 2018
6RU8
DownloadVisualize
BU of 6ru8 by Molmil
Crystal structure of Casein Kinase I delta (CK1d) in complex with triple phosphorylated p63 PAD3P peptide
分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, Casein kinase I isoform delta, ...
著者Chaikuad, A, Tuppi, M, Gebel, J, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Dotsch, V, Knapp, S, Structural Genomics Consortium (SGC)
登録日2019-05-27
公開日2020-05-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献p63 uses a switch-like mechanism to set the threshold for induction of apoptosis.
Nat.Chem.Biol., 16, 2020
1KC8
DownloadVisualize
BU of 1kc8 by Molmil
Co-crystal Structure of Blasticidin S Bound to the 50S Ribosomal Subunit
分子名称: 23S RRNA, 5S RRNA, BLASTICIDIN S, ...
著者Hansen, J.L, Ban, N, Nissen, P, Moore, P.B, Steitz, T.A.
登録日2001-11-07
公開日2003-07-22
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (3.01 Å)
主引用文献Structures of Five Antibiotics Bound at the Peptidyl Transferase Center of the Large Ribosomal Subunit
J.Mol.Biol., 330, 2003
6DWH
DownloadVisualize
BU of 6dwh by Molmil
Crystal structure of complex of BBKI and Bovine Trypsin
分子名称: CHLORIDE ION, Cationic trypsin, Kunitz-type inihibitor, ...
著者Li, M, Wlodawer, A.
登録日2018-06-26
公開日2019-01-30
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of the complex of a kallikrein inhibitor from Bauhinia bauhinioides with trypsin and modeling of kallikrein complexes.
Acta Crystallogr D Struct Biol, 75, 2019
4BR6
DownloadVisualize
BU of 4br6 by Molmil
Crystal structure of Chaetomium thermophilum MnSOD
分子名称: GLYCEROL, MANGANESE (III) ION, SODIUM ION, ...
著者Haikarainen, T, Frioux, C, Zhnag, L.-Q, Li, D.-C, Papageorgiou, A.C.
登録日2013-06-04
公開日2013-12-18
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure and Biochemical Characterization of a Manganese Superoxide Dismutase from Chaetomium Thermophilum.
Biochim.Biophys.Acta, 1844, 2014
5CH7
DownloadVisualize
BU of 5ch7 by Molmil
Crystal structure of the perchlorate reductase PcrAB - Phe164 gate switch intermediate - from Azospira suillum PS
分子名称: 1,2-ETHANEDIOL, 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, ACETATE ION, ...
著者Tsai, C.-L, Tainer, J.A.
登録日2015-07-10
公開日2016-03-09
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Perchlorate Reductase Is Distinguished by Active Site Aromatic Gate Residues.
J.Biol.Chem., 291, 2016
3SZ9
DownloadVisualize
BU of 3sz9 by Molmil
Crystal structure of human ALDH2 modified with the beta-elimination product of Aldi-3; 1-(4-ethylbenzene)prop-2-en-1-one
分子名称: 1,2-ETHANEDIOL, 1-(4-ethylphenyl)propan-1-one, Aldehyde dehydrogenase, ...
著者Perez-Miller, S, Hurley, T.D.
登録日2011-07-18
公開日2011-11-02
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Discovery of a novel class of covalent inhibitor for aldehyde dehydrogenases.
J.Biol.Chem., 286, 2011
4KAF
DownloadVisualize
BU of 4kaf by Molmil
Crystal Structure of Haloalkane dehalogenase HaloTag7 at the resolution 1.5A, Northeast Structural Genomics Consortium (NESG) Target OR151
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Haloalkane dehalogenase, ...
著者Kuzin, A.P, Lew, S, Neklesa, T.K, Noblin, D, Seetharaman, J, Maglaqui, M, Xiao, R, Kohan, E, Wang, H, Everett, J.K, Acton, T.B, Kornhaber, G, Montelione, G.T, Crews, C, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2013-04-22
公開日2013-06-05
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.496 Å)
主引用文献Northeast Structural Genomics Consortium Target OR151
To be Published
5B8D
DownloadVisualize
BU of 5b8d by Molmil
Crystal structure of a low occupancy fragment candidate (N-(4-Methyl-1,3-thiazol-2-yl)propanamide) bound adjacent to the ubiquitin binding pocket of the HDAC6 zinc-finger domain
分子名称: FORMIC ACID, Histone deacetylase 6, SODIUM ION, ...
著者Harding, R.J, Tempel, W, Collins, P, Pearce, N, Brandao-Neto, J, Douangamath, A, Ravichandran, M, Schapira, M, Bountra, C, Edwards, A.M, von Delft, F, Santhakumar, V, Arrowsmith, C.M, Structural Genomics Consortium (SGC)
登録日2016-06-14
公開日2016-07-27
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Small Molecule Antagonists of the Interaction between the Histone Deacetylase 6 Zinc-Finger Domain and Ubiquitin.
J. Med. Chem., 60, 2017
5GT6
DownloadVisualize
BU of 5gt6 by Molmil
Apo structure of Aldehyde Dehydrogenase from Bacillus cereus
分子名称: Betaine-aldehyde dehydrogenase, SODIUM ION
著者Ngo, H.P.T, Hong, S.H, Ho, T.H, Oh, D.K, Kang, L.W.
登録日2016-08-18
公開日2017-09-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献crystal structures of aldehyde dehydrogenase from Bacillus cereus having atypical bidirectional oxidizing and reducing activities for all-trans-retinal
To Be Published
4K6O
DownloadVisualize
BU of 4k6o by Molmil
X-ray structure uridine phosphorylase from Vibrio cholerae in complex with 6-methyluracil at 1.17 A resolution
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 6-methylpyrimidine-2,4-diol, ...
著者Prokofev, I.I, Lashkov, A.A, Gabdoulkhakov, A.G, Betzel, C, Mikhailov, A.M.
登録日2013-04-16
公開日2014-05-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.17 Å)
主引用文献Crystallization and preliminary X-ray study of Vibrio cholerae uridine phosphorylase in complex with 6-methyluracil.
Acta Crystallogr.,Sect.F, 70, 2014
6G5C
DownloadVisualize
BU of 6g5c by Molmil
Interaction of TiO2 nanoparticles (NM-101) with Lysozyme
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ...
著者Sbirkova-Dimitrova, H.I, Radoslavov, G, Hristov, P, Ganev, V, Dimowa, L, Rusev, R, Shivachev, B.L.
登録日2018-03-29
公開日2018-10-24
最終更新日2019-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystallization and crystal structure of lysozyme in the presence of nanosized Titanium dioxide
Bul.Chem.Commn., 50, 2018
5FDJ
DownloadVisualize
BU of 5fdj by Molmil
Hen egg lysozyme at room temperature solved from datasets acquired by ultrasonic acoustic levitation method and processed by CrystFEL
分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION
著者Tsujino, S, Tomizaki, T.
登録日2015-12-16
公開日2016-05-25
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Ultrasonic acoustic levitation for fast frame rate X-ray protein crystallography at room temperature.
Sci Rep, 6, 2016
5DW0
DownloadVisualize
BU of 5dw0 by Molmil
TrpB from Pyrococcus furiosus with L-serine bound as the external aldimine
分子名称: SODIUM ION, Tryptophan synthase beta chain 1, [3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-SERINE
著者Buller, A.R, Arnold, F.H.
登録日2015-09-22
公開日2015-11-11
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Directed evolution of the tryptophan synthase beta-subunit for stand-alone function recapitulates allosteric activation.
Proc.Natl.Acad.Sci.USA, 112, 2015
5DY9
DownloadVisualize
BU of 5dy9 by Molmil
Y68T Hfq from Methanococcus jannaschii in complex with AMP
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ADENOSINE MONOPHOSPHATE, CHLORIDE ION, ...
著者Nikulin, A.D, Mikhailina, A.O, Lekontseva, N.V, Balobanov, V.A, Nikonova, E.Y, Tishchenko, S.V.
登録日2015-09-24
公開日2016-09-28
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Characterization of RNA-binding properties of the archaeal Hfq-like protein from Methanococcus jannaschii.
J. Biomol. Struct. Dyn., 35, 2017
4PHI
DownloadVisualize
BU of 4phi by Molmil
Crystal structure of HEWL with hexatungstotellurate(VI)
分子名称: 6-tungstotellurate(VI), ACETATE ION, GLYCEROL, ...
著者Bijelic, A, Molitor, C, Mauracher, S.G, Al-Oweini, R, Kortz, U, Rompel, A.
登録日2014-05-06
公開日2015-01-14
最終更新日2015-01-21
実験手法X-RAY DIFFRACTION (1.811 Å)
主引用文献Hen Egg-White Lysozyme Crystallisation: Protein Stacking and Structure Stability Enhanced by a Tellurium(VI)-Centred Polyoxotungstate.
Chembiochem, 16, 2015
6TRW
DownloadVisualize
BU of 6trw by Molmil
Crystal structure of DPP8 in complex with the EIL peptide (SLRFLFEGQRIADNH)
分子名称: Dipeptidyl peptidase 8, SER-LEU-ARG-PHE-LEU-PHE-GLU-GLY-GLN-ARG, SODIUM ION
著者Ross, B, Huber, R.
登録日2019-12-19
公開日2021-01-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Aerosol-based ligand soaking of reservoir-free protein crystals.
J.Appl.Crystallogr., 54, 2021
1K8A
DownloadVisualize
BU of 1k8a by Molmil
Co-crystal structure of Carbomycin A bound to the 50S ribosomal subunit of Haloarcula marismortui
分子名称: 23S RRNA, 5S RRNA, CADMIUM ION, ...
著者Hansen, J.L, Ippolito, J.A, Ban, N, Nissen, P, Moore, P.B, Steitz, T.
登録日2001-10-23
公開日2002-07-19
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The structures of four macrolide antibiotics bound to the large ribosomal subunit.
Mol.Cell, 10, 2002
4RJY
DownloadVisualize
BU of 4rjy by Molmil
Crystal structure of E. coli L-Threonine Aldolase in complex with a non-covalently uncleaved bound L-serine substrate
分子名称: Low specificity L-threonine aldolase, SERINE, SODIUM ION
著者Safo, M.K, Chowdhury, N, Gandhi, A.K.
登録日2014-10-11
公開日2014-10-29
最終更新日2015-02-04
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Molecular basis of E. colil-threonine aldolase catalytic inactivation at low pH.
Biochim.Biophys.Acta, 1854, 2015

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon