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7TVK
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Structural, Kinetic, and Mechanistic Analysis of the Wild-Type and Inactivated Malonate Semialdehyde Decarboxylase: A Structural Basis for the Decarboxylase and Hydratase Activities
分子名称: Malonate Semialdehyde Decarboxylase
著者Yang, W.J, Zhang, Y.J.
登録日2022-02-05
公開日2022-12-21
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Kinetic, Inhibition, and Structural Characterization of a Malonate Semialdehyde Decarboxylase-like Protein from Calothrix sp. PCC 6303: A Gateway to the non-Pro1 Tautomerase Superfamily Members.
Biochemistry, 2022
6UIH
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Crystal structure of the core domain from the GST-like protein GDAP1
分子名称: Ganglioside-induced differentiation-associated protein 1
著者Googins, M.R, VanDemark, A.P.
登録日2019-09-30
公開日2020-04-29
最終更新日2020-05-13
実験手法X-RAY DIFFRACTION (2.826 Å)
主引用文献Structural and functional divergence of GDAP1 from the glutathione S-transferase superfamily.
Faseb J., 34, 2020
6NRX
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Crystal structure of DIP-eta IG1 homodimer
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Dpr-interacting protein eta, isoform B, ...
著者Cheng, S, Park, Y.J, Kurleto, J.D, Ozkan, E.
登録日2019-01-24
公開日2019-02-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Molecular basis of synaptic specificity by immunoglobulin superfamily receptors in Drosophila.
Elife, 8, 2019
6NRW
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Crystal structure of Dpr1 IG1 bound to DIP-eta IG1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Cheng, S, Park, Y.J, Kurleto, J.D, Ozkan, E.
登録日2019-01-24
公開日2019-02-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Molecular basis of synaptic specificity by immunoglobulin superfamily receptors in Drosophila.
Elife, 8, 2019
6NRQ
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Crystal structure of Dpr10 IG1 bound to DIP-alpha IG1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Defective proboscis extension response 10, isoform A, ...
著者Cheng, S, Park, Y.J, Kurleto, J.D, Ozkan, E.
登録日2019-01-24
公開日2019-02-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Molecular basis of synaptic specificity by immunoglobulin superfamily receptors in Drosophila.
Elife, 8, 2019
6NS1
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BU of 6ns1 by Molmil
Crystal structure of DIP-gamma IG1+IG2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Dpr-interacting protein gamma
著者Cheng, S, Park, Y.J, Kurleto, J.D, Ozkan, E.
登録日2019-01-24
公開日2019-02-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Molecular basis of synaptic specificity by immunoglobulin superfamily receptors in Drosophila.
Elife, 8, 2019
6SNQ
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Crystal structures of human PGM1 isoform 2
分子名称: 6-O-phosphono-alpha-D-glucopyranose, Phosphoglucomutase-1, ZINC ION
著者Backe, P.H, Laerdahl, J.K, Kittelsen, L.S, Dalhus, B, Morkrid, L, Bjoras, M.
登録日2019-08-27
公開日2020-04-08
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis for substrate and product recognition in human phosphoglucomutase-1 (PGM1) isoform 2, a member of the alpha-D-phosphohexomutase superfamily.
Sci Rep, 10, 2020
1JPM
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L-Ala-D/L-Glu Epimerase
分子名称: GLYCEROL, L-Ala-D/L-Glu Epimerase, MAGNESIUM ION
著者Gulick, A.M, Schmidt, D.M.Z, Gerlt, J.A, Rayment, I.
登録日2001-08-02
公開日2001-12-21
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Evolution of enzymatic activities in the enolase superfamily: crystal structures of the L-Ala-D/L-Glu epimerases from Escherichia coli and Bacillus subtilis.
Biochemistry, 40, 2001
6SNO
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BU of 6sno by Molmil
Crystal structures of human PGM1 isoform 2
分子名称: 1-O-phosphono-alpha-D-glucopyranose, Phosphoglucomutase-1, ZINC ION
著者Backe, P.H, Laerdahl, J.K, Kittelsen, L.S, Dalhus, B, Morkrid, L, Bjoras, M.
登録日2019-08-27
公開日2020-04-08
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis for substrate and product recognition in human phosphoglucomutase-1 (PGM1) isoform 2, a member of the alpha-D-phosphohexomutase superfamily.
Sci Rep, 10, 2020
2ODA
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BU of 2oda by Molmil
Crystal Structure of PSPTO_2114
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Hypothetical protein PSPTO_2114, MAGNESIUM ION
著者Peisach, E, Allen, K.N, Dunaway-Mariano, D, Wang, L, Burroughs, A.M, Aravind, L.
登録日2006-12-22
公開日2007-09-04
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The X-ray crystallographic structure and activity analysis of a Pseudomonas-specific subfamily of the HAD enzyme superfamily evidences a novel biochemical function.
Proteins, 70, 2007
1JPD
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L-Ala-D/L-Glu Epimerase
分子名称: L-Ala-D/L-Glu Epimerase
著者Gulick, A.M, Schmidt, D.M.Z, Gerlt, J.A, Rayment, I.
登録日2001-08-01
公開日2001-12-21
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Evolution of enzymatic activities in the enolase superfamily: crystal structures of the L-Ala-D/L-Glu epimerases from Escherichia coli and Bacillus subtilis.
Biochemistry, 40, 2001
8BN8
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BU of 8bn8 by Molmil
METTL3-METTL14 heterodimer bound to the SAM competitive small molecule inhibitor STM3006
分子名称: 2-[[4-(6-bromanyl-2~{H}-indazol-4-yl)-1,2,3-triazol-1-yl]methyl]-6-[(4,4-dimethylpiperidin-1-yl)methyl]imidazo[1,2-a]pyridine, N6-adenosine-methyltransferase catalytic subunit, N6-adenosine-methyltransferase non-catalytic subunit
著者Pilka, E.S, Thomas, B, Blackaby, W, Hardick, D, Feeney, K, Ridgill, M, Rotty, B, Rausch, O.
登録日2022-11-13
公開日2023-09-20
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.213 Å)
主引用文献Inhibition of METTL3 Results in a Cell-Intrinsic Interferon Response That Enhances Antitumor Immunity.
Cancer Discov, 13, 2023
5XD8
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BU of 5xd8 by Molmil
Crystal structure analysis of 3,6-anhydro-L-galactonate cycloisomerase
分子名称: 3,6-anhydro-alpha-L-galactonate cycloisomerase, MAGNESIUM ION
著者Lee, S, Choi, I.-G, Kim, H.-Y.
登録日2017-03-27
公開日2017-09-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.505 Å)
主引用文献Crystal structure analysis of 3,6-anhydro-l-galactonate cycloisomerase suggests emergence of novel substrate specificity in the enolase superfamily
Biochem. Biophys. Res. Commun., 491, 2017
2VU5
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BU of 2vu5 by Molmil
Crystal structure of Pndk from Bacillus anthracis
分子名称: NUCLEOSIDE DIPHOSPHATE KINASE
著者Misra, G, Aggarwal, A, Dube, D, Zaman, M.S, Singh, Y, Ramachandran, R.
登録日2008-05-21
公開日2009-03-10
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of the Bacillus Anthracis Nucleoside Diphosphate Kinase and its Characterization Reveals an Enzyme Adapted to Perform Under Stress Conditions.
Proteins, 76, 2009
4R90
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Anti CD70 Llama glama Fab 27B3
分子名称: Anti CD70 Llama glama Fab 27B3 Heavy chain, Anti CD70 Llama glama Fab 27B3 Light chain, CALCIUM ION, ...
著者Klarenbeek, A, El Mazouari, K, Desmyter, A, Blanchetot, C, Hultberg, A, Roovers, R.C, Cambillau, C, Spinelli, S, Del-Favero, J, Verrips, T, de Haard, H, Achour, I.
登録日2014-09-03
公開日2015-06-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.746 Å)
主引用文献Camelid Ig V genes reveal significant human homology not seen in therapeutic target genes, providing for a powerful therapeutic antibody platform.
MAbs, 7, 2015
4R96
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Structure of a Llama Glama Fab 48A2 against human cMet
分子名称: Llama glama Fab 48A2 against human cMet H chain, Llama glama Fab 48A2 against human cMet L chain
著者Klarenbeek, A, El Mazouari, K, Desmyter, A, Blanchetot, C, Hultberg, A, Roovers, R.C, Cambillau, C, Spinelli, S, Del-Favero, J, Verrips, T, de Haard, H, Achour, I.
登録日2014-09-03
公開日2015-06-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.31 Å)
主引用文献Camelid Ig V genes reveal significant human homology not seen in therapeutic target genes, providing for a powerful therapeutic antibody platform.
MAbs, 7, 2015
8TBF
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BU of 8tbf by Molmil
Tricomplex of RMC-7977, KRAS WT, and CypA
分子名称: (1R,5S,6r)-N-[(1P,7S,9S,13S,20M)-20-{5-(4-cyclopropylpiperazin-1-yl)-2-[(1S)-1-methoxyethyl]pyridin-3-yl}-21-ethyl-17,17-dimethyl-8,14-dioxo-15-oxa-4-thia-9,21,27,28-tetraazapentacyclo[17.5.2.1~2,5~.1~9,13~.0~22,26~]octacosa-1(24),2,5(28),19,22,25-hexaen-7-yl]-3-oxabicyclo[3.1.0]hexane-6-carboxamide, 1,2-ETHANEDIOL, GTPase KRas, ...
著者Tomlinson, A.C.A, Chen, A, Knox, J.E, Yano, J.K.
登録日2023-06-28
公開日2024-02-07
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Concurrent inhibition of oncogenic and wild-type RAS-GTP for cancer therapy.
Nature, 629, 2024
6PPC
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Solution structure of conotoxin MiXXVIIA
分子名称: Conopeptide phi-MiXXVIIA
著者Daly, N.L, Dekan, Z, Jin, A.H, Alewood, P.F.
登録日2019-07-06
公開日2019-08-14
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Conotoxin phi-MiXXVIIA from the Superfamily G2 Employs a Novel Cysteine Framework that Mimics Granulin and Displays Anti-Apoptotic Activity.
Angew. Chem. Int. Ed. Engl., 56, 2017
8TZZ
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BU of 8tzz by Molmil
SpG Cas9 with NGC PAM DNA target
分子名称: CRISPR-associated endonuclease Cas9/Csn1, DNA (5'-D(P*CP*GP*TP*TP*TP*GP*TP*AP*CP*TP*GP*CP*AP*GP*CP*G)-3'), DNA (5'-D(P*TP*CP*TP*CP*AP*TP*CP*TP*TP*TP*AP*TP*GP*CP*GP*TP*C)-3'), ...
著者Bravo, J.P.K, Hibshman, G.N, Taylor, D.W.
登録日2023-08-28
公開日2024-05-01
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.56 Å)
主引用文献Unraveling the mechanisms of PAMless DNA interrogation by SpRY-Cas9.
Nat Commun, 15, 2024
8T7S
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BU of 8t7s by Molmil
SpRYmer bound to NAC PAM DNA
分子名称: CRISPR-associated endonuclease Cas9/Csn1, MAGNESIUM ION, NTS, ...
著者Hibshman, G.N, Bravo, J.P.K, Taylor, D.W.
登録日2023-06-21
公開日2024-05-01
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.01 Å)
主引用文献Unraveling the mechanisms of PAMless DNA interrogation by SpRY-Cas9.
Nat Commun, 15, 2024
8U3Y
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BU of 8u3y by Molmil
SpG Cas9 with NGG PAM DNA target
分子名称: CRISPR-associated endonuclease Cas9/Csn1, DNA (5'-D(P*CP*GP*TP*TP*TP*GP*TP*AP*CP*TP*CP*CP*AP*GP*CP*G)-3'), DNA (5'-D(P*TP*CP*TP*CP*AP*TP*CP*TP*TP*TP*AP*TP*GP*CP*GP*TP*C)-3'), ...
著者Bravo, J.P.K, Hibshman, G.N, Taylor, D.W.
登録日2023-09-08
公開日2024-05-01
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Unraveling the mechanisms of PAMless DNA interrogation by SpRY-Cas9.
Nat Commun, 15, 2024
8T78
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SpRY-Cas9:gRNA complex bound to non-target DNA with 8 bp R-loop
分子名称: CRISPR-associated endonuclease Cas9/Csn1, NTS, TS, ...
著者Hibshman, G.N, Bravo, J.P.K, Taylor, D.W.
登録日2023-06-19
公開日2024-05-01
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.02 Å)
主引用文献Unraveling the mechanisms of PAMless DNA interrogation by SpRY-Cas9.
Nat Commun, 15, 2024
8T79
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SpRY-Cas9:gRNA complex bound to non-target DNA with 10 bp R-loop
分子名称: CRISPR-associated endonuclease Cas9/Csn1, NTS, TS, ...
著者Hibshman, G.N, Bravo, J.P.K, Taylor, D.W.
登録日2023-06-20
公開日2024-05-08
実験手法ELECTRON MICROSCOPY (3.04 Å)
主引用文献Unraveling the mechanisms of PAMless DNA interrogation by SpRY-Cas9.
Nat Commun, 15, 2024
1A7C
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HUMAN PLASMINOGEN ACTIVATOR INHIBITOR TYPE-1 IN COMPLEX WITH A PENTAPEPTIDE
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-D-ribopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, PENTAPEPTIDE, ...
著者Xue, Y, Inghardt, T, Sjolin, L, Deinum, J.
登録日1998-03-12
公開日1999-03-23
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Interfering with the inhibitory mechanism of serpins: crystal structure of a complex formed between cleaved plasminogen activator inhibitor type 1 and a reactive-centre loop peptide
Structure, 6, 1998
6QAJ
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Structure of the tripartite motif of KAP1/TRIM28
分子名称: Endolysin,Transcription intermediary factor 1-beta, ZINC ION
著者Stoll, G.A, Oda, S, Yu, M, Modis, Y.
登録日2018-12-19
公開日2019-07-24
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.901 Å)
主引用文献Structure of KAP1 tripartite motif identifies molecular interfaces required for retroelement silencing.
Proc.Natl.Acad.Sci.USA, 116, 2019

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