Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3C9C
DownloadVisualize
BU of 3c9c by Molmil
Structural Basis of Histone H4 Recognition by p55
分子名称: CADMIUM ION, Chromatin assembly factor 1 p55 subunit, Histone H4, ...
著者Song, J.J, Garlick, J.D, Kingston, R.E.
登録日2008-02-15
公開日2008-05-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis of histone H4 recognition by p55.
Genes Dev., 22, 2008
7OW7
DownloadVisualize
BU of 7ow7 by Molmil
EIF6-bound large subunit of the human ribosome
分子名称: 28S rRNA, 5.8S ribosomal RNA, 5S rRNA, ...
著者Faille, A, Warren, A.J.
登録日2021-06-16
公開日2022-10-05
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Structure of human EIF6-bound large ribosomal subunit
To Be Published
6IP6
DownloadVisualize
BU of 6ip6 by Molmil
Cryo-EM structure of the CMV-stalled human 80S ribosome with HCV IRES (Structure iii)
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ...
著者Yokoyama, T, Shigematsu, H, Shirouzu, M, Imataka, H, Ito, T.
登録日2018-11-02
公開日2019-05-29
最終更新日2019-11-06
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献HCV IRES Captures an Actively Translating 80S Ribosome.
Mol.Cell, 74, 2019
6IP8
DownloadVisualize
BU of 6ip8 by Molmil
Cryo-EM structure of the HCV IRES dependently initiated CMV-stalled 80S ribosome (Structure iv)
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ...
著者Yokoyama, T, Shigematsu, H, Shirouzu, M, Imataka, H, Ito, T.
登録日2018-11-02
公開日2019-05-29
最終更新日2019-11-06
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献HCV IRES Captures an Actively Translating 80S Ribosome.
Mol.Cell, 74, 2019
6ZYM
DownloadVisualize
BU of 6zym by Molmil
Human C Complex Spliceosome - High-resolution CORE
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, Cell division cycle 5-like protein, Corepressor interacting with RBPJ 1, ...
著者Bertram, K, Kastner, B.
登録日2020-08-02
公開日2020-10-14
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural Insights into the Roles of Metazoan-Specific Splicing Factors in the Human Step 1 Spliceosome.
Mol.Cell, 80, 2020
8FKU
DownloadVisualize
BU of 8fku by Molmil
Human nucleolar pre-60S ribosomal subunit (State C2)
分子名称: 28S rRNA, 5.8S rRNA, 60S ribosomal protein L10a, ...
著者Vanden Broeck, A, Klinge, S.
登録日2022-12-21
公開日2023-07-12
最終更新日2023-07-19
実験手法ELECTRON MICROSCOPY (2.82 Å)
主引用文献Principles of human pre-60 S biogenesis.
Science, 381, 2023
8FKT
DownloadVisualize
BU of 8fkt by Molmil
Human nucleolar pre-60S ribosomal subunit (State C1)
分子名称: 28S rRNA, 5.8S rRNA, 60S ribosomal protein L10a, ...
著者Vanden Broeck, A, Klinge, S.
登録日2022-12-21
公開日2023-07-12
最終更新日2023-07-19
実験手法ELECTRON MICROSCOPY (2.81 Å)
主引用文献Principles of human pre-60 S biogenesis.
Science, 381, 2023
6IP5
DownloadVisualize
BU of 6ip5 by Molmil
Cryo-EM structure of the CMV-stalled human 80S ribosome (Structure ii)
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ...
著者Yokoyama, T, Shigematsu, H, Shirouzu, M, Imataka, H, Ito, T.
登録日2018-11-02
公開日2019-05-29
最終更新日2019-11-06
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献HCV IRES Captures an Actively Translating 80S Ribosome.
Mol.Cell, 74, 2019
8EQV
DownloadVisualize
BU of 8eqv by Molmil
Cryo-EM structure of PRC2 in complex with the long isoform of AEBP2
分子名称: Histone-binding protein RBBP4, Histone-lysine N-methyltransferase EZH2, Polycomb protein EED, ...
著者Boudes, M, Zhang, Q, Flanigan, S.F, Davidovich, C.
登録日2022-10-09
公開日2024-07-31
実験手法ELECTRON MICROSCOPY (3.64 Å)
主引用文献To be updated
To Be Published
6CIX
DownloadVisualize
BU of 6cix by Molmil
Lactam cyclised mimetic of a fragment of p21
分子名称: p21
著者Wegener, K.L.
登録日2018-02-25
公開日2018-07-04
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Rational Design of a 310-Helical PIP-Box Mimetic Targeting PCNA, the Human Sliding Clamp.
Chemistry, 24, 2018
6CEJ
DownloadVisualize
BU of 6cej by Molmil
Solution structure of a 14mer fragment of the p21 protein
分子名称: Cyclin-dependent kinase inhibitor 1
著者Wegener, K.L.
登録日2018-02-12
公開日2018-07-04
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Rational Design of a 310-Helical PIP-Box Mimetic Targeting PCNA, the Human Sliding Clamp.
Chemistry, 24, 2018
4R7A
DownloadVisualize
BU of 4r7a by Molmil
Crystal Structure of RBBP4 bound to PHF6 peptide
分子名称: GLYCEROL, Histone-binding protein RBBP4, PHD finger protein 6
著者Liu, Z, Li, F, Zhang, B, Li, S, Wu, J, Shi, Y.
登録日2014-08-27
公開日2015-01-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural Basis of Plant Homeodomain Finger 6 (PHF6) Recognition by the Retinoblastoma Binding Protein 4 (RBBP4) Component of the Nucleosome Remodeling and Deacetylase (NuRD) Complex
J.Biol.Chem., 290, 2015
4WKM
DownloadVisualize
BU of 4wkm by Molmil
AmpR effector binding domain from Citrobacter freundii bound to UDP-MurNAc-pentapeptide
分子名称: ALA-FGA-API-DAL-DAL, GLYCEROL, LysR family transcriptional regulator, ...
著者Vadlamani, G, Reeve, T.M, Mark, B.L.
登録日2014-10-02
公開日2014-12-17
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献The beta-Lactamase Gene Regulator AmpR Is a Tetramer That Recognizes and Binds the d-Ala-d-Ala Motif of Its Repressor UDP-N-acetylmuramic Acid (MurNAc)-pentapeptide.
J.Biol.Chem., 290, 2015
2XAS
DownloadVisualize
BU of 2xas by Molmil
Crystal structure of LSD1-CoREST in complex with a tranylcypromine derivative (MC2580, 14e)
分子名称: 3-[4-({N-[(BENZYLOXY)CARBONYL]-L-PHENYLALANYL}AMINO)PHENYL]PROPANOIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, LYSINE-SPECIFIC HISTONE DEMETHYLASE 1, ...
著者Binda, C, Valente, S, Romanenghi, M, Pilotto, S, Cirilli, R, Karytinos, A, Ciossani, G, Botrugno, O.A, Forneris, F, Tardugno, M, Edmondson, D.E, Minucci, S, Mattevi, A, Mai, A.
登録日2010-03-31
公開日2010-05-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Biochemical, Structural, and Biological Evaluation of Tranylcypromine Derivatives as Inhibitors of Histone Demethylases Lsd1 and Lsd2.
J.Am.Chem.Soc., 132, 2010
4WVY
DownloadVisualize
BU of 4wvy by Molmil
Double-heterohexameric rings of full-length Rvb1(ATP)/Rvb2(apo)
分子名称: ADENOSINE-5'-TRIPHOSPHATE, RuvB-like 1, RuvB-like 2
著者Hopfner, K.-P, Lakomek, K.
登録日2014-11-08
公開日2015-02-18
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.64 Å)
主引用文献Structural Basis for Dodecameric Assembly States and Conformational Plasticity of the Full-Length AAA+ ATPases Rvb1Rvb2.
Structure, 23, 2015
2XAF
DownloadVisualize
BU of 2xaf by Molmil
Crystal structure of LSD1-CoREST in complex with para-bromo-(+)-cis-2- phenylcyclopropyl-1-amine
分子名称: 3-(4-BROMOPHENYL)PROPANAMIDE, FLAVIN-ADENINE DINUCLEOTIDE, LYSINE-SPECIFIC HISTONE DEMETHYLASE 1, ...
著者Binda, C, Valente, S, Romanenghi, M, Pilotto, S, Cirilli, R, Karytinos, A, Ciossani, G, Botrugno, O.A, Forneris, F, Tardugno, M, Edmondson, D.E, Minucci, S, Mattevi, A, Mai, A.
登録日2010-03-31
公開日2010-05-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Biochemical, Structural, and Biological Evaluation of Tranylcypromine Derivatives as Inhibitors of Histone Demethylases Lsd1 and Lsd2.
J.Am.Chem.Soc., 132, 2010
2XAH
DownloadVisualize
BU of 2xah by Molmil
Crystal structure of LSD1-CoREST in complex with (+)-trans-2- phenylcyclopropyl-1-amine
分子名称: 3-PHENYLPROPANAL, FLAVIN-ADENINE DINUCLEOTIDE, LYSINE-SPECIFIC HISTONE DEMETHYLASE 1, ...
著者Binda, C, Valente, S, Romanenghi, M, Pilotto, S, Cirilli, R, Karytinos, A, Ciossani, G, Botrugno, O.A, Forneris, F, Tardugno, M, Edmondson, D.E, Minucci, S, Mattevi, A, Mai, A.
登録日2010-03-31
公開日2010-05-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Biochemical, Structural, and Biological Evaluation of Tranylcypromine Derivatives as Inhibitors of Histone Demethylases Lsd1 and Lsd2.
J.Am.Chem.Soc., 132, 2010
2XAQ
DownloadVisualize
BU of 2xaq by Molmil
Crystal structure of LSD1-CoREST in complex with a tranylcypromine derivative (MC2584, 13b)
分子名称: 3-{4-[(PHENYLCARBONYL)AMINO]PHENYL}PROPANOIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, LYSINE-SPECIFIC HISTONE DEMETHYLASE 1, ...
著者Binda, C, Valente, S, Romanenghi, M, Pilotto, S, Cirilli, R, Karytinos, A, Ciossani, G, Botrugno, O.A, Forneris, F, Tardugno, M, Edmondson, D.E, Minucci, S, Mattevi, A, Mai, A.
登録日2010-03-31
公開日2010-05-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Biochemical, Structural, and Biological Evaluation of Tranylcypromine Derivatives as Inhibitors of Histone Demethylases Lsd1 and Lsd2.
J.Am.Chem.Soc., 132, 2010
2XAG
DownloadVisualize
BU of 2xag by Molmil
Crystal structure of LSD1-CoREST in complex with para-bromo-(-)-trans- 2-phenylcyclopropyl-1-amine
分子名称: 3-(4-BROMOPHENYL)PROPANAMIDE, FLAVIN-ADENINE DINUCLEOTIDE, LYSINE-SPECIFIC HISTONE DEMETHYLASE 1, ...
著者Binda, C, Valente, S, Romanenghi, M, Pilotto, S, Cirilli, R, Karytinos, A, Ciossani, G, Botrugno, O.A, Forneris, F, Tardugno, M, Edmondson, D.E, Minucci, S, Mattevi, A, Mai, A.
登録日2010-03-31
公開日2010-05-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Biochemical, Structural, and Biological Evaluation of Tranylcypromine Derivatives as Inhibitors of Histone Demethylases Lsd1 and Lsd2.
J.Am.Chem.Soc., 132, 2010
2XAJ
DownloadVisualize
BU of 2xaj by Molmil
Crystal structure of LSD1-CoREST in complex with (-)-trans-2- phenylcyclopropyl-1-amine
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, LYSINE-SPECIFIC HISTONE DEMETHYLASE 1, PHENYLETHYLENECARBOXYLIC ACID, ...
著者Binda, C, Valente, S, Romanenghi, M, Pilotto, S, Cirilli, R, Karytinos, A, Ciossani, G, Botrugno, O.A, Forneris, F, Tardugno, M, Edmondson, D.E, Minucci, S, Mattevi, A, Mai, A.
登録日2010-03-31
公開日2010-05-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Biochemical, Structural, and Biological Evaluation of Tranylcypromine Derivatives as Inhibitors of Histone Demethylases Lsd1 and Lsd2.
J.Am.Chem.Soc., 132, 2010
1HOM
DownloadVisualize
BU of 1hom by Molmil
DETERMINATION OF THE THREE-DIMENSIONAL STRUCTURE OF THE ANTENNAPEDIA HOMEODOMAIN FROM DROSOPHILA IN SOLUTION BY 1H NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY
分子名称: ANTENNAPEDIA PROTEIN
著者Qian, Y.-Q, Billeter, M, Otting, G, Muller, M, Gehring, W.J, Wuthrich, K.
登録日1991-10-08
公開日1993-10-31
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Determination of the three-dimensional structure of the Antennapedia homeodomain from Drosophila in solution by 1H nuclear magnetic resonance spectroscopy.
J.Mol.Biol., 214, 1990
3R6S
DownloadVisualize
BU of 3r6s by Molmil
Crystal structure of GlxR transcription factor from Corynebacterium glutamicum with cAMP
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, HEXANE-1,6-DIOL, transcription regulator
著者Jungwirth, B, Pojer, F.
登録日2011-03-22
公開日2012-03-28
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Crystal structure of GlxR transcription factor from Corynebacterium glutamicum with cAMP
To be Published
4EV0
DownloadVisualize
BU of 4ev0 by Molmil
Crystal Structure of Thermus thermophilus Catabolite Activator Protein
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, MAGNESIUM ION, SULFATE ION, ...
著者Hudson, B.P, Turo, K, Birktoft, J.J, Lawson, C.L.
登録日2012-04-25
公開日2012-06-20
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.402 Å)
主引用文献Crystal Structure of T. thermophilius Catabolite Activator Protein
To be Published
5OSM
DownloadVisualize
BU of 5osm by Molmil
Cdk2(F80C, C177A) with covalent adduct at C80
分子名称: Cyclin-dependent kinase 2, methyl 1-propanoyl-3,4-dihydro-2~{H}-quinoline-6-carboxylate
著者Craven, G, Morgan, R.M.L, Mann, D.J.
登録日2017-08-17
公開日2018-03-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献High-Throughput Kinetic Analysis for Target-Directed Covalent Ligand Discovery.
Angew. Chem. Int. Ed. Engl., 57, 2018
4XK4
DownloadVisualize
BU of 4xk4 by Molmil
E. coli transcriptional regulator RUTR with dihydrouracil
分子名称: DIHYDROPYRIMIDINE-2,4(1H,3H)-DIONE, HTH-type transcriptional regulator RutR
著者Shumilin, I.A, Cooper, D.R, Shabalin, I.G, Grabowski, M, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
登録日2015-01-09
公開日2015-05-13
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献E. COLI TRANSCRIPTIONAL REGULATOR RUTR WITH DIHYDROURACIL
to be published

224931

件を2024-09-11に公開中

PDB statisticsPDBj update infoContact PDBjnumon