PDB: 41522 件ウェブページステータス検索Chemie searchBIRD

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6FUO	F11 T-Cell Receptor Recognising PKYVKQNTLKLAT Peptide Presented by HLA-DR*0101 分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... 著者 Rizkallah, P.J, Cole, D.K. 登録日 2018-02-27 公開日 2018-04-18 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 In Silicoand Structural Analyses Demonstrate That Intrinsic Protein Motions Guide T Cell Receptor Complementarity Determining Region Loop Flexibility. Front Immunol, 9, 2018
3BJP	Urate oxidase cyanide uric acid ternary complex 分子名称: ACETYL GROUP, CYANIDE ION, SODIUM ION, ... 著者 Gabison, L, Prange, T, Colloc'h, N, El Hajji, M, Castro, B, Chiadmi, M. 登録日 2007-12-04 公開日 2008-08-12 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural analysis of urate oxidase in complex with its natural substrate inhibited by cyanide: Mechanistic implications Bmc Struct.Biol., 8, 2008
1OHF	The refined structure of Nudaurelia capensis omega virus 分子名称: MAGNESIUM ION, p70 著者 Helgstrand, C, Munshi, S, Johnson, J.E, Liljas, L. 登録日 2003-05-26 公開日 2004-02-26 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 The Refined Structure of Nudaurelia Capensis Omega Virus Reveals Control Elements for a T = 4 Capsid Maturation Virology, 318, 2004
5CO7	E. coli MazF form III 分子名称: Endoribonuclease MazF 著者 Zorzini, V, Loris, R. 登録日 2015-07-19 公開日 2016-04-06 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.489 Å) 主引用文献 Substrate Recognition and Activity Regulation of the Escherichia coli mRNA Endonuclease MazF. J.Biol.Chem., 291, 2016
6G4R	Corynebacterium glutamicum OxyR C206S mutant, H2O2-bound 分子名称: 1,2-ETHANEDIOL, HYDROGEN PEROXIDE, Hydrogen peroxide-inducible genes activator, ... 著者 Young, D.R, Pedre, B.P, Messens, J.M. 登録日 2018-03-28 公開日 2018-12-05 最終更新日 2018-12-19 実験手法 X-RAY DIFFRACTION (2.62 Å) 主引用文献 Structural snapshots of OxyR reveal the peroxidatic mechanism of H2O2sensing. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
3DIK	Pseudo-atomic model of the HIV-1 CA hexameric lattice 分子名称: Capsid protein p24 著者 Ganser-Pornillos, B.K, Cheng, A, Yeager, M. 登録日 2008-06-20 公開日 2008-09-16 最終更新日 2024-02-21 実験手法 ELECTRON CRYSTALLOGRAPHY (9 Å) 主引用文献 Structure of full-length HIV-1 CA: a model for the mature capsid lattice Cell(Cambridge,Mass.), 131, 2007
3ZJ1	Structure of Nab2p tandem zinc finger 12 分子名称: NUCLEAR POLYADENYLATED RNA-BINDING PROTEIN NAB2, ZINC ION 著者 Martinez-Lumbreras, S, Santiveri, C.M, Mirassou, Y, Zorrilla, S, Perez-Canadillas, J.M. 登録日 2013-01-16 公開日 2013-09-11 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Two Singular Types of Ccch Tandem Zinc Finger in Nab2P Contribute to Polyadenosine RNA Recognition. Structure, 21, 2013
1YTK	Crystal structure of a nicotinate phosphoribosyltransferase from Thermoplasma acidophilum with nicotinate mononucleotide 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, NICOTINATE MONONUCLEOTIDE, nicotinate phosphoribosyltransferase from Thermoplasma acidophilum 著者 Shin, D.H, Berkeley Structural Genomics Center (BSGC) 登録日 2005-02-10 公開日 2005-03-08 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Crystal structure of a nicotinate phosphoribosyltransferase from Thermoplasma acidophilum. J.Biol.Chem., 280, 2005
6FQB	MurT/GatD peptidoglycan amidotransferase complex from Streptococcus pneumoniae R6 分子名称: Cobyric acid synthase, GLUTAMINE, Mur ligase family protein 著者 Morlot, C, Contreras-Martel, C, Leisico, F, Straume, D, Peters, K, Hegnar, O.A, Simon, N, Villard, A.M, Breukink, E, Gravier-Pelletier, C, Le Corre, L, Vollmer, W, Pietrancosta, N, Havarstein, L.S, Zapun, A. 登録日 2018-02-13 公開日 2018-08-22 最終更新日 2018-11-07 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structure of the essential peptidoglycan amidotransferase MurT/GatD complex from Streptococcus pneumoniae. Nat Commun, 9, 2018
3DOF	Complex of ARL2 and BART, Crystal Form 2 分子名称: ADP-ribosylation factor-like protein 2, ADP-ribosylation factor-like protein 2-binding protein, GUANOSINE-5'-TRIPHOSPHATE, ... 著者 Zhang, T, Li, S, Ding, J. 登録日 2008-07-04 公開日 2009-03-03 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Crystal structure of the ARL2-GTP-BART complex reveals a novel recognition and binding mode of small GTPase with effector Structure, 17, 2009
3YGS	APAF-1 CARD IN COMPLEX WITH PRODOMAIN OF PROCASPASE-9 分子名称: APOPTOTIC PROTEASE ACTIVATING FACTOR 1, PROCASPASE 9 著者 Qin, H, Srinivasula, S, Wu, G, Fernandes-Alnemri, T, Alnemri, E, Shi, Y. 登録日 1999-05-08 公開日 2000-04-19 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural basis of procaspase-9 recruitment by the apoptotic protease-activating factor 1. Nature, 399, 1999
3ZKR	X-ray structure of a pentameric ligand gated ion channel from Erwinia chrysanthemi (ELIC) in complex with bromoform 分子名称: CYS-LOOP LIGAND-GATED ION CHANNEL, TRIBROMOMETHANE 著者 Spurny, R, Billen, B, Howard, R.J, Brams, M, Debaveye, S, Price, K.L, Weston, D.A, Strelkov, S.V, Tytgat, J, Bertrand, S, Bertrand, D, Lummis, S.C.R, Ulens, C. 登録日 2013-01-24 公開日 2013-02-06 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.649 Å) 主引用文献 Multisite Binding of a General Anesthetic to the Prokaryotic Pentameric Erwinia Chrysanthemi Ligand-Gated Ion Channel (Elic). J.Biol.Chem., 288, 2013
6G1D	Corynebacterium glutamicum OxyR C206 mutant 分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, FORMIC ACID, ... 著者 Young, D.R, Pedre, B.P, Messens, J.M. 登録日 2018-03-21 公開日 2018-12-05 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.992 Å) 主引用文献 Structural snapshots of OxyR reveal the peroxidatic mechanism of H2O2sensing. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
3JR9	Crystal structure of Fis bound to 27 bp optimal binding sequence F2 分子名称: DNA (27-MER), DNA-binding protein fis 著者 Stella, S, Cascio, D, Johnson, R.C. 登録日 2009-09-08 公開日 2010-04-28 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 The shape of the DNA minor groove directs binding by the DNA-bending protein Fis. Genes Dev., 24, 2010
3JRF	Crystal structure of Fis bound to 27 bp DNA F27 containing a C/G at center 分子名称: DNA (27-MER), DNA-binding protein fis 著者 Stella, S, Cascio, D, Johnson, R.C. 登録日 2009-09-08 公開日 2010-04-28 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (3.05 Å) 主引用文献 The shape of the DNA minor groove directs binding by the DNA-bending protein Fis. Genes Dev., 24, 2010
5FXH	GluN1b-GluN2B NMDA receptor in non-active-1 conformation 分子名称: N-METHYL-D-ASPARTATE RECEPTOR GLUN1, N-METHYL-D-ASPARTATE RECEPTOR GLUN2B 著者 Tajima, N, Karakas, E, Grant, T, Simorowski, N, Diaz-Avalos, R, Grigorieff, N, Furukawa, H. 登録日 2016-03-02 公開日 2016-05-11 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (5 Å) 主引用文献 Activation of Nmda Receptors and the Mechanism of Inhibition by Ifenprodil. Nature, 534, 2016
1Q04	Crystal structure of FGF-1, S50E/V51N 分子名称: FORMIC ACID, Heparin-binding growth factor 1 著者 Kim, J, Blaber, M. 登録日 2003-07-15 公開日 2004-07-27 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Sequence swapping does not result in conformation swapping for the beta4/beta5 and beta8/beta9 beta-hairpin turns in human acidic fibroblast growth factor Protein Sci., 14, 2005
3WZX	S266A mutant 3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1 at 0.1MPa - complex with IPM and Mg 分子名称: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, MAGNESIUM ION 著者 Nagae, T, Watanabe, N. 登録日 2014-10-08 公開日 2015-10-14 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Pressure Adaptation of 3-Isopropylmalate Dehydrogenase from the Extremely Piezophilic Bacterium Shewanella benthica is Attributed to just One Amino Acid Substitution To be Published
5FUG	Crystal structure of a human YL1-H2A.Z-H2B complex 分子名称: HISTONE H2A.Z, HISTONE H2B TYPE 1-J, VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 72 HOMOLOG 著者 Latrick, C.M, Marek, M, Ouararhni, K, Papin, C, Stoll, I, Ignatyeva, M, Obri, A, Ennifar, E, Dimitrov, S, Romier, C, Hamiche, A. 登録日 2016-01-27 公開日 2016-03-09 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Molecular Basis and Specificity of H2A.Z-H2B Recognition and Deposition by the Histone Chaperone Yl1 Nat.Struct.Mol.Biol., 23, 2016
3NFE	The crystal structure of hemoglobin I from trematomus newnesi in deoxygenated state 分子名称: Hemoglobin subunit alpha-1, Hemoglobin subunit beta-1/2, PROTOPORPHYRIN IX CONTAINING FE 著者 Vergara, A, Vitagliano, L, Merlino, A, Sica, F, Marino, K, Mazzarella, L. 登録日 2010-06-10 公開日 2010-07-07 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.01 Å) 主引用文献 An order-disorder transition plays a role in switching off the root effect in fish hemoglobins. J.Biol.Chem., 285, 2010
1YTE	Crystal structure of a nicotinate phosphoribosyltransferase from Thermoplasma acidophilum, phosphoribosylpyrophosphate bound structure 分子名称: 1-ALPHA-PYROPHOSPHORYL-2-ALPHA,3-ALPHA-DIHYDROXY-4-BETA-CYCLOPENTANE-METHANOL-5-PHOSPHATE, nicotinate phosphoribosyltransferase from Thermoplasma acidophilum 著者 Shin, D.H, Berkeley Structural Genomics Center (BSGC) 登録日 2005-02-10 公開日 2005-03-08 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 Crystal structure of a nicotinate phosphoribosyltransferase from Thermoplasma acidophilum. J.Biol.Chem., 280, 2005
3JRD	Crystal structure of Fis bound to 27 bp DNA F25 containing T2A3 sequence at center 分子名称: DNA (27-MER), DNA-binding protein fis 著者 Stella, S, Cascio, D, Johnson, R.C. 登録日 2009-09-08 公開日 2010-04-28 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 The shape of the DNA minor groove directs binding by the DNA-bending protein Fis. Genes Dev., 24, 2010
3ZHW	X-ray Crystallographic Structural Characteristics of Arabidopsis Hemoglobin I and their Functional Implications 分子名称: NON-SYMBIOTIC HEMOGLOBIN 1, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION 著者 Mukhi, N, Dhindwal, S, Uppal, S, Kumar, P, Kaur, J, Kundu, S. 登録日 2012-12-30 公開日 2013-03-06 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.22 Å) 主引用文献 X-Ray Crystallographic Structural Characteristics of Arabidopsis Hemoglobin I and Their Functional Implications Biochim.Biophys.Acta, 1834, 2013
1PQV	RNA polymerase II-TFIIS complex 分子名称: DNA-directed RNA polymerase II 13.6 kDa polypeptide, DNA-directed RNA polymerase II 14.2 kDa polypeptide, DNA-directed RNA polymerase II 140 kDa polypeptide, ... 著者 Kettenberger, H, Armache, K.-J, Cramer, P. 登録日 2003-06-19 公開日 2003-08-19 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (3.8 Å) 主引用文献 Architecture of the RNA Polymerase II-TFIIS Complex and Implications for mRNA Cleavage Cell(Cambridge,Mass.), 114, 2003
5GM8	Methylation at position 32 of tRNA catalyzed by TrmJ alters oxidative stress response in Pseudomonas aeruiginosa 分子名称: SINEFUNGIN, tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ 著者 Jaroensuk, J, Atichartpongkul, S, Chionh, Y.H, Wong, Y.H, Liew, C.W, McBee, M.E, Thongdee, N, Prestwich, E.G, DeMott, M.S, Mongkolsuk, S, Dedon, P.C, Lescar, J, Fuangthong, M. 登録日 2016-07-13 公開日 2016-10-26 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Methylation at position 32 of tRNA catalyzed by TrmJ alters oxidative stress response in Pseudomonas aeruginosa. Nucleic Acids Res., 44, 2016

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