PDB: 222415 件ウェブページステータス検索Chemie searchBIRD

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4V4W	Structure of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1143 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal subunit protein S10, ... 著者 Mitra, K, Frank, J. 登録日 2006-05-09 公開日 2014-07-09 最終更新日 2024-02-28 実験手法 ELECTRON MICROSCOPY (15 Å) 主引用文献 Elongation arrest by SecM via a cascade of ribosomal RNA rearrangements Mol.Cell, 22, 2006
3GVK	Crystal structure of endo-neuraminidase NF mutant 分子名称: Endo-N-acetylneuraminidase, N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-beta-neuraminic acid, N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-beta-neuraminic acid, ... 著者 Schulz, E.C, Dickmanns, A, Ficner, R. 登録日 2009-03-31 公開日 2010-03-02 最終更新日 2021-10-13 実験手法 X-RAY DIFFRACTION (1.84 Å) 主引用文献 Structural basis for the recognition and cleavage of polysialic acid by the bacteriophage K1F tailspike protein EndoNF. J.Mol.Biol., 397, 2010
4O3B	Crystal structure of an open/closed glua2 ligand-binding domain dimer at 1.91 A resolution 分子名称: ACETATE ION, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ... 著者 Krintel, C, de Rabassa, A.C, Frydenvang, K, Gajhede, M, Kastrup, J.S. 登録日 2013-12-18 公開日 2014-04-16 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.906 Å) 主引用文献 L-Asp is a useful tool in the purification of the ionotropic glutamate receptor A2 ligand-binding domain. Febs J., 281, 2014
5VHD	DHX36 with an N-terminal truncation bound to ADP-AlF4 分子名称: ADENOSINE-5'-DIPHOSPHATE, DEAH (Asp-Glu-Ala-His) box polypeptide 36, TETRAFLUOROALUMINATE ION 著者 Chen, M, Ferre-D'Amare, A. 登録日 2017-04-13 公開日 2018-06-13 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 Structural basis of G-quadruplex unfolding by the DEAH/RHA helicase DHX36. Nature, 558, 2018
1VRO	Selenium-Assisted Nucleic Acid Crystallography: Use of Phosphoroselenoates for MAD Phasing of a DNA Structure 分子名称: 5'-D(*CP*(GMS)P*CP*GP*CP*G)-3', MAGNESIUM ION, SPERMINE 著者 Wilds, C.J, Pattanayek, R, Pan, C, Wawrzak, Z, Egli, M. 登録日 2005-04-14 公開日 2005-04-19 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 Selenium-Assisted Nucleic Acid Crystallography: Use of Phosphoroselenoates for MAD Phasing of a DNA Structure J.Am.Chem.Soc., 124, 2002
1VRP	The 2.1 Structure of T. californica Creatine Kinase Complexed with the Transition-State Analogue Complex, ADP-Mg 2+ /NO3-/Creatine 分子名称: (DIAMINOMETHYL-METHYL-AMINO)-ACETIC ACID, ADENOSINE-5'-DIPHOSPHATE, Creatine Kinase, ... 著者 Lahiri, S.D, Wang, P.F, Babbitt, P.C, McLeish, M.J, Kenyon, G.L, Allen, K.N. 登録日 2005-04-25 公開日 2005-05-03 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 The 2.1 A Structure of Torpedo californica Creatine Kinase Complexed with the ADP-Mg(2+)-NO3(-)-Creatine Transition-State Analogue Complex Biochemistry, 41, 2002
4O3A	Crystal structure of the glua2 ligand-binding domain in complex with L-aspartate at 1.80 a resolution 分子名称: ACETATE ION, ASPARTIC ACID, CHLORIDE ION, ... 著者 Krintel, C, Frydenvang, F, Gajhede, M, Kastrup, J.S. 登録日 2013-12-18 公開日 2014-04-16 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 L-Asp is a useful tool in the purification of the ionotropic glutamate receptor A2 ligand-binding domain. Febs J., 281, 2014
1VRZ	Helix turn helix motif 分子名称: ACETATE ION, DE NOVO DESIGNED 21 RESIDUE PEPTIDE 著者 Rudresh, Ramakumar, S, Ramagopal, U.A, Inai, Y, Sahal, D. 登録日 2005-10-14 公開日 2005-11-01 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.05 Å) 主引用文献 De Novo Design and Characterization of a Helical Hairpin Eicosapeptide; Emergence of an Anion Receptor in the Linker Region. Structure, 12, 2004
4O35	Crystal structure of carbomonoxy murine neuroglobin mutant F106W 分子名称: 1,4-DIETHYLENE DIOXIDE, CARBON MONOXIDE, Neuroglobin, ... 著者 Avella, G, Savino, C, Vallone, B. 登録日 2013-12-18 公開日 2014-06-18 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Engineering the internal cavity of neuroglobin demonstrates the role of the haem-sliding mechanism. Acta Crystallogr.,Sect.D, 70, 2014
2XCX	Crystal structure of the apoform of the D52N variant of cytosolic 5'- nucleotidase II 分子名称: CYTOSOLIC PURINE 5'-NUCLEOTIDASE, GLYCEROL 著者 Wallden, K, Nordlund, P. 登録日 2010-04-26 公開日 2011-03-16 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural Basis for the Allosteric Regulation and Substrate Recognition of Human Cytosolic 5'-Nucleotidase II J.Mol.Biol., 408, 2011
6Q92	Crystal structure of human Arginase-1 at pH 7.0 in complex with ABH 分子名称: 2(S)-AMINO-6-BORONOHEXANOIC ACID, Arginase-1, MANGANESE (II) ION, ... 著者 Grobben, Y, Uitdehaag, J.C.M, Zaman, G.J.R. 登録日 2018-12-17 公開日 2019-12-11 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Structural insights into human Arginase-1 pH dependence and its inhibition by the small molecule inhibitor CB-1158. J Struct Biol X, 4, 2020
1WBF	WINGED BEAN LECTIN, SACCHARIDE FREE FORM 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, MANGANESE (II) ION, ... 著者 Manoj, N, Srinivas, V.R, Suguna, K. 登録日 1998-12-16 公開日 1999-12-22 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure of basic winged-bean lectin and a comparison with its saccharide-bound form. Acta Crystallogr.,Sect.D, 55, 1999
1W8N	Contribution of the Active Site Aspartic Acid to Catalysis in the Bacterial Neuraminidase from Micromonospora viridifaciens. 分子名称: 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID, BACTERIAL SIALIDASE, SODIUM ION, ... 著者 Newstead, S, Watson, J.N, Dookhun, V, Bennet, A.J, Taylor, G. 登録日 2004-09-24 公開日 2004-09-30 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Contribution of the Active Site Aspartic Acid to Catalysis in the Bacterial Neuraminidase from Micromonospora Viridifaciens FEBS Lett., 577, 2004
2XXB	Penta-mutant of Thermus thermophilus lactate dehydrogenase, complex with AMP 分子名称: ADENOSINE MONOPHOSPHATE, L-LACTATE DEHYDROGENASE 著者 Diop, F, Coquelle, N, Vellieux, F.M.D. 登録日 2010-11-09 公開日 2010-11-17 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Lactate Dehydrogenase from T. Thermophilus, Penta-Mutant (Complex with AMP) To be Published
3H6Z	Crystal Structure of the Four MBT Repeats of Drosophila melanogaster Sfmbt in Complex with Peptide RHR (me)K VLR 分子名称: 'HR(MLZ)VLR, Polycomb protein Sfmbt, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose 著者 Grimm, C, Mueller, C.W. 登録日 2009-04-24 公開日 2009-06-16 最終更新日 2021-11-10 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Molecular recognition of histone lysine methylation by the Polycomb group repressor dSfmbt Embo J., 28, 2009
6ZJT	Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB mutant E441Q in complex with lactulose 分子名称: ACETATE ION, Beta-galactosidase, SODIUM ION, ... 著者 Rutkiewicz, M, Bujacz, A, Bujacz, G. 登録日 2020-06-29 公開日 2020-08-05 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.97 Å) 主引用文献 Mapping the Transglycosylation Relevant Sites of Cold-Adapted beta-d-Galactosidase fromArthrobactersp. 32cB. Int J Mol Sci, 21, 2020
4V4V	Structure of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal subunit protein S10, ... 著者 Mitra, K, Frank, J. 登録日 2006-05-09 公開日 2014-07-09 最終更新日 2024-02-28 実験手法 ELECTRON MICROSCOPY (15 Å) 主引用文献 Elongation arrest by SecM via a cascade of ribosomal RNA rearrangements Mol.Cell, 22, 2006
7M1H	Crystal structure of LC/A-JPU-C10-JPU-D12-JPU-B8-JPU-G3-ciA-F12-ciA-D12 分子名称: Botulinum neurotoxin A light chain, JPU-B8, JPU-C10, ... 著者 Lam, K, Jin, R. 登録日 2021-03-13 公開日 2021-12-22 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.78 Å) 主引用文献 Probing the structure and function of the protease domain of botulinum neurotoxins using single-domain antibodies. Plos Pathog., 18, 2022
5VHC	DHX36 with an N-terminal truncation bound to ADP-BeF3 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DEAH (Asp-Glu-Ala-His) box polypeptide 36, ... 著者 Chen, M, Ferre-D'Amare, A. 登録日 2017-04-12 公開日 2018-06-13 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.49 Å) 主引用文献 Structural basis of G-quadruplex unfolding by the DEAH/RHA helicase DHX36. Nature, 558, 2018
7LZP	LC/A-JPU-B9-JPU-A11-JPU-G11 分子名称: Botulinum neurotoxin A light chain, JPU-A11, JPU-B9, ... 著者 Lam, K, Jin, R. 登録日 2021-03-10 公開日 2021-12-22 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.86 Å) 主引用文献 Probing the structure and function of the protease domain of botulinum neurotoxins using single-domain antibodies. Plos Pathog., 18, 2022
2XJD	Crystal structure of the D52N variant of cytosolic 5'-nucleotidase II in complex with inorganic phosphate and deoxyadenosine triphosphate 分子名称: ADENOSINE-5'-TRIPHOSPHATE, CYTOSOLIC PURINE 5'-NUCLEOTIDASE, GLYCEROL, ... 著者 Wallden, K, Nordlund, P. 登録日 2010-07-04 公開日 2011-04-27 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural Basis for the Allosteric Regulation and Substrate Recognition of Human Cytosolic 5'-Nucleotidase II. J.Mol.Biol., 408, 2011
5VK2	Structural basis for antibody-mediated neutralization of Lassa virus 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Hastie, K.M, Zandonatti, M.A, Kleinfelter, L.M, Rowland, M.L, Rowland, M.M, Chandra, K, Branco, L.M, Robinson, J.E, Garry, R.F, Saphire, E.O. 登録日 2017-04-20 公開日 2017-05-31 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (3.201 Å) 主引用文献 Structural basis for antibody-mediated neutralization of Lassa virus. Science, 356, 2017
3GXD	Crystal structure of Apo acid-beta-glucosidase pH 4.5 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Glucosylceramidase, PHOSPHATE ION 著者 Lieberman, R.L. 登録日 2009-04-02 公開日 2009-05-05 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Effects of pH and iminosugar pharmacological chaperones on lysosomal glycosidase structure and stability. Biochemistry, 48, 2009
2FQF	Crystal Structures of E. coli Laccase CueO under different copper binding situations 分子名称: Blue copper oxidase cueO, CITRIC ACID, COPPER (II) ION, ... 著者 Li, X, Wei, Z, Zhang, M, Teng, M, Gong, W. 登録日 2006-01-18 公開日 2007-01-30 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal structures of E. coli laccase CueO at different copper concentrations. Biochem.Biophys.Res.Commun., 354, 2007
1M6N	Crystal structure of the SecA translocation ATPase from Bacillus subtilis 分子名称: Preprotein translocase secA, SULFATE ION 著者 Hunt, J.F, Weinkauf, S, Henry, L, Fak, J.J, McNicholas, P, Oliver, D.B, Deisenhofer, J. 登録日 2002-07-16 公開日 2002-09-20 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Nucleotide Control of Interdomain Interactions in the Conformational Reaction Cycle of SecA Science, 297, 2002

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