PDB: 98041 件ウェブページステータス検索Chemie searchBIRD

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6K1I	Human nucleosome core particle with gammaH2A.X variant 分子名称: CHLORIDE ION, DNA (147-MER), Histone H2AX, ... 著者 Sharma, D, De Falco, L, Davey, C.A. 登録日 2019-05-10 公開日 2020-01-15 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 PARP1 exhibits enhanced association and catalytic efficiency with gamma H2A.X-nucleosome. Nat Commun, 10, 2019
3H7C	Crystal Structure of Arabidopsis thaliana Agmatine Deiminase from Cell Free Expression 分子名称: 2,2',2''-NITRILOTRIETHANOL, Agmatine deiminase, CHLORIDE ION, ... 著者 Burgie, E.S, Bingman, C.A, Phillips Jr, G.N, Center for Eukaryotic Structural Genomics (CESG) 登録日 2009-04-24 公開日 2009-05-26 最終更新日 2017-11-01 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Structural Insights into the Catalytic Mechanism of Arabidopsis thaliana Agmatine Deiminase To be Published
7NKE	Crystal structure of human RXRalpha ligand binding domain in complex with 2,4-di-tert-butylphenol and a coactivator fragment 分子名称: 2,4-di~{tert}-butylphenol, FORMIC ACID, Nuclear receptor coactivator 2, ... 著者 Carivenc, C, Bourguet, W. 登録日 2021-02-17 公開日 2022-03-02 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 2,4-Di-tert-butylphenol Induces Adipogenesis in Human Mesenchymal Stem Cells by Activating Retinoid X Receptors. Endocrinology, 164, 2023
5AX8	Recombinant expression, purification and preliminary crystallographic studies of the mature form of human mitochondrial aspartate aminotransferase 分子名称: Aspartate aminotransferase, mitochondrial 著者 Jiang, X, Wang, J, Chang, H, Zhou, Y. 登録日 2015-07-20 公開日 2016-03-16 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.989 Å) 主引用文献 Recombinant expression, purification and crystallographic studies of the mature form of human mitochondrial aspartate aminotransferase Biosci Trends, 10, 2016
7N3R	The ternary complex of human Bisphosphoglycerate mutase with 3-phosphoglycerate and 2-phosphoglycolate 分子名称: 2-PHOSPHOGLYCOLIC ACID, 3-PHOSPHOGLYCERIC ACID, Bisphosphoglycerate mutase 著者 Aljahdali, A.S, Musayev, F.N, Safo, M.K. 登録日 2021-06-01 公開日 2022-04-13 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Molecular insight into 2-phosphoglycolate activation of the phosphatase activity of bisphosphoglycerate mutase. Acta Crystallogr D Struct Biol, 78, 2022
2F4M	The Mouse PNGase-HR23 Complex Reveals a Complete Remodulation of the Protein-Protein Interface Compared to its Yeast Orthologs 分子名称: CHLORIDE ION, UV excision repair protein RAD23 homolog B, ZINC ION, ... 著者 Zhao, G, Zhou, X, Wang, L, Kisker, C, Lennarz, W.J, Schindelin, H. 登録日 2005-11-23 公開日 2006-03-07 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Structure of the mouse peptide N-glycanase-HR23 complex suggests co-evolution of the endoplasmic reticulum-associated degradation and DNA repair pathways. J.Biol.Chem., 281, 2006
1HUF	CRYSTAL STRUCTURE OF THE N-TERMINAL DOMAIN OF THE TYROSINE PHOSPHATASE YOPH FROM YERSINIA PESTIS. 分子名称: TYROSINE PHOSPHATASE YOPH 著者 Evdokimov, A.G, Waugh, D.S. 登録日 2001-01-04 公開日 2001-05-23 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structure of the N-terminal domain of Yersinia pestis YopH at 2.0 A resolution. Acta Crystallogr.,Sect.D, 57, 2001
5T94	Crystal structure of Kap60 bound to yeast RCC1 (Prp20) 分子名称: Guanine nucleotide exchange factor SRM1, Importin subunit alpha 著者 Sankhala, R.S, Lokareddy, R.K, Pumroy, R.A, Cingolani, G. 登録日 2016-09-09 公開日 2017-09-13 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.631 Å) 主引用文献 Three-dimensional context rather than NLS amino acid sequence determines importin alpha subtype specificity for RCC1. Nat Commun, 8, 2017
2F6U	Crystal Structure of (S)-3-O-Geranylgeranylglyceryl Phosphate Synthase complexed with citrate 分子名称: (S)-3-O-Geranylgeranylglyceryl Phosphate Synthase, CITRIC ACID 著者 Payandeh, J. 登録日 2005-11-29 公開日 2006-01-24 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 The crystal structure of (S)-3-O-geranylgeranylglyceryl phosphate synthase reveals an ancient fold for an ancient enzyme J.Biol.Chem., 281, 2006
4OQ8	Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using icosahedral constraints 分子名称: Coat protein, MAGNESIUM ION, PHOSPHATE ION, ... 著者 Larson, S.B, Day, J.S, McPherson, A. 登録日 2014-02-07 公開日 2014-09-10 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Satellite tobacco mosaic virus refined to 1.4 angstrom resolution. Acta Crystallogr.,Sect.D, 70, 2014
1B06	SUPEROXIDE DISMUTASE FROM SULFOLOBUS ACIDOCALDARIUS 分子名称: FE (III) ION, PROTEIN (SUPEROXIDE DISMUTASE) 著者 Knapp, S, Kardinahl, S, Niklas, H, Tibbelin, G, Schafer, G, Ladenstein, R. 登録日 1998-11-16 公開日 1999-11-18 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Refined crystal structure of a superoxide dismutase from the hyperthermophilic archaeon Sulfolobus acidocaldarius at 2.2 A resolution. J.Mol.Biol., 285, 1999
5DWZ	Structural and functional characterization of PqsBC, a condensing enzyme in the biosynthesis of the Pseudomonas aeruginosa quinolone signal 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3-oxoacyl-(Acyl carrier protein) synthase III, 3-oxoacyl-[acyl-carrier-protein] synthase 3, ... 著者 Drees, S.L, Li, C, Prasetya, F, Saleem, M, Dreveny, I, Hennecke, U, Williams, P, Emsley, J, Fetzner, S. 登録日 2015-09-23 公開日 2016-02-03 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.04 Å) 主引用文献 PqsBC, a Condensing Enzyme in the Biosynthesis of the Pseudomonas aeruginosa Quinolone Signal: CRYSTAL STRUCTURE, INHIBITION, AND REACTION MECHANISM. J.Biol.Chem., 291, 2016
4TUP	Structure of human DNA polymerase beta complexed with GG as the template (GG0b) in a 1-nucleotide gapped DNA 分子名称: DNA (5'-D(*CP*CP*CP*AP*CP*GP*GP*CP*CP*CP*AP*TP*CP*AP*CP*C)-3'), DNA (5'-D(*GP*GP*TP*GP*AP*TP*GP*GP*GP*C)-3'), DNA (5'-D(P*GP*TP*GP*GP*G)-3'), ... 著者 Koag, M.C, Lee, S. 登録日 2014-06-24 公開日 2014-10-01 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural Basis for the Inefficient Nucleotide Incorporation Opposite Cisplatin-DNA Lesion by Human DNA Polymerase beta. J.Biol.Chem., 289, 2014
5E3A	Structure of human DPP3 in complex with opioid peptide leu-enkephalin 分子名称: Dipeptidyl peptidase 3, Leu-enkephalin, MAGNESIUM ION, ... 著者 Kumar, P, Reithofer, V, Reisinger, M, Pavkov-Keller, T, Wallner, S, Macheroux, P, Gruber, K. 登録日 2015-10-02 公開日 2016-04-13 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Substrate complexes of human dipeptidyl peptidase III reveal the mechanism of enzyme inhibition. Sci Rep, 6, 2016
5UBE	Crystal structure of the N-terminal domain (domain 1) of RctB 分子名称: RctB replication initiator protein 著者 Orlova, N, Ivashkiv, O, Waldor, M.K, Jeruzalmi, D. 登録日 2016-12-20 公開日 2017-01-11 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 The replication initiator of the cholera pathogen's second chromosome shows structural similarity to plasmid initiators. Nucleic Acids Res., 45, 2017
1HIL	STRUCTURAL EVIDENCE FOR INDUCED FIT AS A MECHANISM FOR ANTIGEN-ANTIBODY RECOGNITION 分子名称: IGG2A-KAPPA 17/9 FAB (HEAVY CHAIN), IGG2A-KAPPA 17/9 FAB (LIGHT CHAIN) 著者 Rini, J.M, Wilson, I.A. 登録日 1992-07-08 公開日 1994-01-31 最終更新日 2024-06-05 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural evidence for induced fit as a mechanism for antibody-antigen recognition. Science, 255, 1992
5DYX	Crystal Structure of BAZ2B bromodomain in complex with fragment F59 分子名称: ADENINE, Bromodomain adjacent to zinc finger domain protein 2B 著者 Lolli, G, Caflisch, A. 登録日 2015-09-25 公開日 2016-03-16 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 High-Throughput Fragment Docking into the BAZ2B Bromodomain: Efficient in Silico Screening for X-Ray Crystallography. Acs Chem.Biol., 11, 2016
5E3C	Structure of human DPP3 in complex with hemorphin like opioid peptide IVYPW 分子名称: Dipeptidyl peptidase 3, IVYPW, MAGNESIUM ION, ... 著者 Kumar, P, Reithofer, V, Reisinger, M, Pavkov-Keller, T, Wallner, S, Macheroux, P, Gruber, K. 登録日 2015-10-02 公開日 2016-04-13 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.765 Å) 主引用文献 Substrate complexes of human dipeptidyl peptidase III reveal the mechanism of enzyme inhibition. Sci Rep, 6, 2016
5E9K	Crystal Structure of BAZ2B bromodomain in complex with fragment F275 分子名称: 2-chloro-1H-imidazole, Bromodomain adjacent to zinc finger domain protein 2B 著者 Lolli, G, Caflisch, A. 登録日 2015-10-15 公開日 2016-03-16 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.067 Å) 主引用文献 High-Throughput Fragment Docking into the BAZ2B Bromodomain: Efficient in Silico Screening for X-Ray Crystallography. Acs Chem.Biol., 11, 2016
7NRV	Paired helical filament from Alzheimer's disease with PET ligand APN-1607 分子名称: Microtubule-associated protein tau 著者 Shi, Y, Murzin, A.G, Falcon, B, Epstein, A, Machin, J, Tempest, P, Newell, K.L, Vidal, R, Garringer, H.J, Sahara, N, Higuchi, M, Ghetti, B, Jang, M, Scheres, S.H.W, Goedert, M. 登録日 2021-03-04 公開日 2021-03-24 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Cryo-EM structures of tau filaments from Alzheimer's disease with PET ligand APN-1607. Acta Neuropathol, 141, 2021
5DQY	A fully oxidized human thioredoxin 分子名称: BENZOIC ACID, CHLORIDE ION, GLYCEROL, ... 著者 Hwang, J. 登録日 2015-09-15 公開日 2015-12-23 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Crystal structure of fully oxidized human thioredoxin. Biochem.Biophys.Res.Commun., 467, 2015
4COB	Crystal structure kynurenine formamidase from Pseudomonas aeruginosa 分子名称: KYNURENINE FORMAMIDASE, ZINC ION 著者 Diaz-Saez, L, Srikannathasan, V, Zoltner, M, Hunter, W.N. 登録日 2014-01-28 公開日 2014-04-02 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.37 Å) 主引用文献 Structure of Bacterial Kynurenine Formamidase Reveals a Crowded Binuclear-Zinc Catalytic Site Primed to Generate a Potent Nucleophile. Biochem.J., 462, 2014
5DTK	Fragments bound to the OXA-48 beta-lactamase: Compound 17 分子名称: 1,2-ETHANEDIOL, 3,5-di(pyridin-4-yl)benzoic acid, Beta-lactamase, ... 著者 Lund, B.A, Christopeit, T, Leiros, H.-K.S. 登録日 2015-09-18 公開日 2016-05-25 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.60000241 Å) 主引用文献 Screening and Design of Inhibitor Scaffolds for the Antibiotic Resistance Oxacillinase-48 (OXA-48) through Surface Plasmon Resonance Screening. J.Med.Chem., 59, 2016
3H7K	Crystal Structure of Arabidopsis thaliana Agmatine Deiminase Complexed with a Covalently Bound Reaction Intermediate 分子名称: Agmatine deiminase, CHLORIDE ION, MAGNESIUM ION, ... 著者 Burgie, E.S, Bingman, C.A, Phillips Jr, G.N, Center for Eukaryotic Structural Genomics (CESG) 登録日 2009-04-27 公開日 2009-05-26 最終更新日 2017-11-01 実験手法 X-RAY DIFFRACTION (1.84 Å) 主引用文献 Structural Insights into the Catalytic Mechanism of Arabidopsis thaliana Agmatine Deiminase to be published
3RH5	DNA Polymerase Beta Mutant (Y271) with a dideoxy-terminated primer with an incoming deoxynucleotide (dCTP) 分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 5'-D(*CP*CP*GP*AP*CP*GP*CP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(DDG))-3', ... 著者 Cavanaugh, N.A, Beard, W.A, Batra, V.K, Perera, L, Pedersen, L.G, Wilson, S.H. 登録日 2011-04-11 公開日 2011-07-06 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.096 Å) 主引用文献 Molecular insights into DNA polymerase deterrents for ribonucleotide insertion. J.Biol.Chem., 286, 2011

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