Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8CUI
DownloadVisualize
BU of 8cui by Molmil
Human excitatory amino acid transporter 3 (EAAT3) in an intermediate outward facing apo state
分子名称: Excitatory amino acid transporter 3
著者Qiu, B, Boudker, O.
登録日2022-05-17
公開日2023-05-10
最終更新日2023-05-17
実験手法ELECTRON MICROSCOPY (2.55 Å)
主引用文献Symport and antiport mechanisms of human glutamate transporters.
Nat Commun, 14, 2023
8D2W
DownloadVisualize
BU of 8d2w by Molmil
Zebrafish MFSD2A isoform B in inward open ligand 2B conformation
分子名称: DODECYL-BETA-D-MALTOSIDE, FAB heavy chain, FAB light chain, ...
著者Nguyen, C, Lei, H.T, Lai, L.T.F, Gallentino, M.J, Mu, X, Matthies, D, Gonen, T.
登録日2022-05-30
公開日2023-05-10
最終更新日2023-05-24
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Lipid flipping in the omega-3 fatty-acid transporter.
Nat Commun, 14, 2023
8CTC
DownloadVisualize
BU of 8ctc by Molmil
Human excitatory amino acid transporter 3 (EAAT3) with bound glutamate in an intermediate outward facing state
分子名称: Excitatory amino acid transporter 3, GLUTAMIC ACID, MERCURY (II) ION, ...
著者Qiu, B, Boudker, O.
登録日2022-05-13
公開日2023-05-10
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Symport and antiport mechanisms of human glutamate transporters.
Nat Commun, 14, 2023
8D2T
DownloadVisualize
BU of 8d2t by Molmil
Zebrafish MFSD2A isoform B in inward open ligand-free conformation
分子名称: DODECYL-BETA-D-MALTOSIDE, FAB heavy chain, FAB light chain, ...
著者Nguyen, C, Lei, H.T, Lai, L.T.F, Gallentino, M.J, Mu, X, Matthies, D, Gonen, T.
登録日2022-05-30
公開日2023-05-10
最終更新日2023-05-24
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Lipid flipping in the omega-3 fatty-acid transporter.
Nat Commun, 14, 2023
8DIR
DownloadVisualize
BU of 8dir by Molmil
The complex structure between human IgG1 Fc and its high affinity receptor FcgRI H174R variant
分子名称: High affinity immunoglobulin gamma Fc receptor I, Ig gamma-1 Fc chain, SODIUM ION, ...
著者Lu, J, Sun, P.D.
登録日2022-06-29
公開日2023-05-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Fc gamma RI FG-loop functions as a pH sensitive switch for IgG binding and release.
Front Immunol, 14, 2023
8CUA
DownloadVisualize
BU of 8cua by Molmil
Human excitatory amino acid transporter 3 (EAAT3) with bound potassium in an intermediate outward facing state
分子名称: Excitatory amino acid transporter 3, MERCURY (II) ION, POTASSIUM ION
著者Qiu, B, Boudker, O.
登録日2022-05-17
公開日2023-05-10
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (2.44 Å)
主引用文献Symport and antiport mechanisms of human glutamate transporters.
Nat Commun, 14, 2023
8D2X
DownloadVisualize
BU of 8d2x by Molmil
Zebrafish MFSD2A isoform B in inward open ligand 3C conformation
分子名称: DODECYL-BETA-D-MALTOSIDE, FAB heavy chain, FAB light chain, ...
著者Nguyen, C, Lei, H.T, Lai, L.T.F, Gallentino, M.J, Mu, X, Matthies, D, Gonen, T.
登録日2022-05-30
公開日2023-05-10
最終更新日2023-05-24
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Lipid flipping in the omega-3 fatty-acid transporter.
Nat Commun, 14, 2023
8DD6
DownloadVisualize
BU of 8dd6 by Molmil
SARS-CoV-2 Main Protease (Mpro) H163A Mutant in Complex with GC376
分子名称: (1S,2S)-2-({N-[(benzyloxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, DIMETHYL SULFOXIDE, ORF1a polyprotein
著者Tran, N, McLeod, M.J, Kalyaanamoorthy, S, Ganesan, A, Holyoak, T.
登録日2022-06-17
公開日2023-09-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The H163A mutation unravels an oxidized conformation of the SARS-CoV-2 main protease.
Nat Commun, 14, 2023
8CQM
DownloadVisualize
BU of 8cqm by Molmil
Broad-range phospholipase C from Listeria monocytogenes
分子名称: FE (III) ION, GLYCEROL, Phospholipase C, ...
著者Petrisic, N, Podobnik, M.
登録日2023-03-06
公開日2023-10-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis for the unique molecular properties of broad-range phospholipase C from Listeria monocytogenes.
Nat Commun, 14, 2023
8CR2
DownloadVisualize
BU of 8cr2 by Molmil
Homo sapiens Get1/Get2 heterotetramer (a3' deletion variant) in complex with a Get3 dimer
分子名称: ATPase ASNA1, Guided entry of tail-anchored proteins factor CAMLG,Guided entry of tail-anchored proteins factor 1, ZINC ION
著者McDowell, M.A, Heimes, M, Wild, K, Sinning, I.
登録日2023-03-07
公開日2023-11-29
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献The GET insertase exhibits conformational plasticity and induces membrane thinning.
Nat Commun, 14, 2023
8CQZ
DownloadVisualize
BU of 8cqz by Molmil
Homo sapiens Get3 in complex with the Get1 cytoplasmic domain
分子名称: ATPase ASNA1, Guided entry of tail-anchored proteins factor 1
著者McDowell, M.A, Heimes, M, Wild, K, Saar, D, Sinning, I.
登録日2023-03-07
公開日2023-11-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The GET insertase exhibits conformational plasticity and induces membrane thinning.
Nat Commun, 14, 2023
8DPR
DownloadVisualize
BU of 8dpr by Molmil
Crystal structure of SARS-CoV-2 main protease in complex with inhibitor TKB-248
分子名称: 2,2,2-trifluoro-N-{(2S)-1-[(1R,2S,5S)-2-({(2S)-1-(4-fluoro-1,3-benzothiazol-2-yl)-1-oxo-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}carbamothioyl)-6,6-dimethyl-3-azabicyclo[3.1.0]hexan-3-yl]-3,3-dimethyl-1-oxobutan-2-yl}acetamide, 3C-like proteinase nsp5, DIMETHYL SULFOXIDE, ...
著者Bulut, H, Hayashi, H, Tsuji, K, Kuwata, N, Das, D, Tamamura, H, Mitsuya, H.
登録日2022-07-16
公開日2022-08-24
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Identification of SARS-CoV-2 M pro inhibitors containing P1' 4-fluorobenzothiazole moiety highly active against SARS-CoV-2.
Nat Commun, 14, 2023
8DYZ
DownloadVisualize
BU of 8dyz by Molmil
Hen lysozyme in tetragonal space group at ambient temperature - diffuse scattering dataset
分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION
著者Meisburger, S.P, Ando, N.
登録日2022-08-05
公開日2022-09-07
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.272 Å)
主引用文献Robust total X-ray scattering workflow to study correlated motion of proteins in crystals.
Nat Commun, 14, 2023
6YE9
DownloadVisualize
BU of 6ye9 by Molmil
Small-molecule inhibitor of 14-3-3 protein-protein interactions
分子名称: 14-3-3 protein sigma, MAGNESIUM ION, [2-[2-oxidanylidene-2-[(phenylmethyl)amino]ethoxy]phenyl]phosphonic acid
著者Ottmann, C, Visser, E.J.
登録日2020-03-24
公開日2021-03-31
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure-based conversion of a promiscuous inhibitor to a selective stabilizer of protein-protein interactions
To Be Published
7OPJ
DownloadVisualize
BU of 7opj by Molmil
Trypanosoma brucei PTR1 (TbPTR1) in complex with pyrimethamine
分子名称: 5-(4-CHLORO-PHENYL)-6-ETHYL-PYRIMIDINE-2,4-DIAMINE, ACETATE ION, GLYCEROL, ...
著者Tassone, G, Landi, G, Pozzi, C, Mangani, S.
登録日2021-05-31
公開日2021-07-14
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献Evidence of Pyrimethamine and Cycloguanil Analogues as Dual Inhibitors of Trypanosoma brucei Pteridine Reductase and Dihydrofolate Reductase.
Pharmaceuticals, 14, 2021
7OSK
DownloadVisualize
BU of 7osk by Molmil
Ignisphaera aggregans GH53 catalytic domain
分子名称: Arabinogalactan endo-1,4-beta-galactosidase, CALCIUM ION, CHLORIDE ION, ...
著者Fredslund, F, Lo Leggio, L, Poulsen, J.C, Rasmussen, K.K, Muderspach, S, Krogh, K.B.R.M, Jensen, K.
登録日2021-06-08
公開日2021-09-29
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Engineering the substrate binding site of the hyperthermostable archaeal endo-beta-1,4-galactanase from Ignisphaera aggregans.
Biotechnol Biofuels, 14, 2021
7P0R
DownloadVisualize
BU of 7p0r by Molmil
Crystal structure of L-Trp/Indoleamine 2,3-dioxygenase (hIDO1) complex with the JK-loop refined in the intermediate conformation
分子名称: GLYCEROL, Indoleamine 2,3-dioxygenase 1, N'-Formylkynurenine, ...
著者Mirgaux, M, Wouters, J.
登録日2021-06-30
公開日2021-12-29
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Temporary Intermediates of L-Trp Along the Reaction Pathway of Human Indoleamine 2,3-Dioxygenase 1 and Identification of an Exo Site.
Int J Tryptophan Res, 14, 2021
7X73
DownloadVisualize
BU of 7x73 by Molmil
Structure of G9a in complex with RK-701
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Histone-lysine N-methyltransferase EHMT2, ...
著者Niwa, H, Shirai, F, Sato, S, Nishigaya, Y, Shirouzu, M, Umehara, T.
登録日2022-03-09
公開日2022-12-21
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献A specific G9a inhibitor unveils BGLT3 lncRNA as a universal mediator of chemically induced fetal globin gene expression.
Nat Commun, 14, 2023
7XGZ
DownloadVisualize
BU of 7xgz by Molmil
Cryo-EM structure of the T=4 lake sinai virus 2 virus-like capsid at pH 7.5
分子名称: Capsid protein alpha
著者Chen, N.C, Wang, C.H, Chen, C.J, Yoshimura, M, Guan, H.H, Chuankhayan, P, Lin, C.C.
登録日2022-04-07
公開日2023-02-08
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3.24 Å)
主引用文献Structures of honeybee-infecting Lake Sinai virus reveal domain functions and capsid assembly with dynamic motions
Nat Commun, 14, 2023
7XPB
DownloadVisualize
BU of 7xpb by Molmil
Cryo-EM structure of the T=4 lake sinai virus 2 virus-like capsid at pH 6.5
分子名称: Capsid protein alpha
著者Chen, N.C, Wang, C.H, Chen, C.J, Yoshimura, M, Guan, H.H, Chuankhayan, P, Lin, C.C.
登録日2022-05-04
公開日2023-02-08
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.91 Å)
主引用文献Structures of honeybee-infecting Lake Sinai virus reveal domain functions and capsid assembly with dynamic motions.
Nat Commun, 14, 2023
7XPA
DownloadVisualize
BU of 7xpa by Molmil
Cryo-EM structure of the T=3 lake sinai virus 2 virus-like capsid at pH 7.5
分子名称: Capsid protein alpha
著者Chen, N.C, Wang, C.H, Chen, C.J, Yoshimura, M, Guan, H.H, Chuankhayan, P, Lin, C.C.
登録日2022-05-04
公開日2023-02-08
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.33 Å)
主引用文献Structures of honeybee-infecting Lake Sinai virus reveal domain functions and capsid assembly with dynamic motions.
Nat Commun, 14, 2023
7XLQ
DownloadVisualize
BU of 7xlq by Molmil
Structure of human R-type voltage-gated CaV2.3-alpha2/delta1-beta1 channel complex in the ligand-free (apo) state
分子名称: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Gao, Y, Qiu, Y, Wei, Y, Dong, Y, Zhang, X.C, Zhao, Y.
登録日2022-04-22
公開日2023-02-08
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Molecular insights into the gating mechanisms of voltage-gated calcium channel Ca V 2.3.
Nat Commun, 14, 2023
7XK2
DownloadVisualize
BU of 7xk2 by Molmil
Cryo-EM Structure of Human Niacin Receptor HCA2-Gi protein complex
分子名称: 2-[[2,2-dimethyl-3-[3-(5-oxidanylpyridin-2-yl)-1,2,4-oxadiazol-5-yl]propanoyl]amino]cyclohexene-1-carboxylic acid, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Yang, Y, Kang, H.J, Gao, R.G, Wang, J.J, Han, G.W, DiBerto, J.F, Wu, L.J, Tong, J.H, Qu, L, Wu, Y.R, Pileski, R, Li, X.M, Zhang, X.C, Zhao, S.W, Kenakin, T, Wang, Q, Stevens, R.C, Peng, W, Roth, B.L, Rao, Z.H, Liu, Z.J.
登録日2022-04-19
公開日2023-02-22
最終更新日2023-12-06
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural insights into the human niacin receptor HCA2-G i signalling complex.
Nat Commun, 14, 2023
7X9G
DownloadVisualize
BU of 7x9g by Molmil
Crystal structure of human EDA and EDAR
分子名称: Ectodysplasin-A, secreted form, Tumor necrosis factor receptor superfamily member EDAR
著者Yu, K, Wan, F, Huang, C, Wu, J, Lei, M.
登録日2022-03-15
公開日2023-02-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural insights into pathogenic mechanism of hypohidrotic ectodermal dysplasia caused by ectodysplasin A variants.
Nat Commun, 14, 2023
7X2H
DownloadVisualize
BU of 7x2h by Molmil
Crystal structure of SARS-CoV-2 spike receptor-binding domain bound with 6-2C Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 6-2C H chain, 6-2C L chain, ...
著者Wang, X, Wang, Z.
登録日2022-02-25
公開日2023-03-01
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Inactivated vaccine-elicited potent antibodies can broadly neutralize SARS-CoV-2 circulating variants.
Nat Commun, 14, 2023

225946

件を2024-10-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon