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8G6Y
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BU of 8g6y by Molmil
Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site 3-aminopyridine-4-carboxylic acid charged NH-tRNAPhe
分子名称: 23S rRNA, 3'-amino-3'-deoxyadenosine 5'-(dihydrogen phosphate), 3-aminopyridine-4-carboxamide, ...
著者Majumdar, C, Cate, J.H.D.
登録日2023-02-16
公開日2023-04-05
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (2.09 Å)
主引用文献Aminobenzoic Acid Derivatives Obstruct Induced Fit in the Catalytic Center of the Ribosome.
Acs Cent.Sci., 9, 2023
2ZAC
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BU of 2zac by Molmil
Crystal Structure of Family 7 Alginate Lyase A1-II' Y284F in Complex with Product (MMG)
分子名称: Alginate lyase, GLYCEROL, beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid
著者Ogura, K, Yamasaki, M, Mikami, B, Hashimoto, W, Murata, K.
登録日2007-10-02
公開日2008-05-27
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Substrate Recognition in Tunnel of Family 7 Alginate Lyase from Sphingomonas sp. A1
To be Published
5MBU
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BU of 5mbu by Molmil
CeuE (H227A, Y288F variant) a periplasmic protein from Campylobacter jejuni
分子名称: Enterochelin uptake periplasmic binding protein
著者Wilde, E.J, Blagova, E.V, Hughes, A, Raines, D.J, Moroz, O.V, Turkenburg, J.P, Duhme-Klair, A.-K, Wilson, K.S.
登録日2016-11-08
公開日2017-04-12
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Interactions of the periplasmic binding protein CeuE with Fe(III) n-LICAM(4-) siderophore analogues of varied linker length.
Sci Rep, 7, 2017
2ZNO
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BU of 2zno by Molmil
Human PPAR gamma ligand binding domain in complex with a synthetic agonist TIPP703
分子名称: (2S)-2-(4-propoxy-3-{[({4-[(3S,5S,7S)-tricyclo[3.3.1.1~3,7~]dec-1-yl]phenyl}carbonyl)amino]methyl}benzyl)butanoic acid, Peroxisome proliferator-activated receptor gamma
著者Oyama, T, Waku, T, Kasuga, J, Miyachi, H, Morikawa, K.
登録日2008-04-30
公開日2009-05-05
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Adaptability and selectivity of human peroxisome proliferator-activated receptor (PPAR) pan agonists revealed from crystal structures
Acta Crystallogr.,Sect.D, 65, 2009
3NUG
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BU of 3nug by Molmil
Crystal structure of wild type tetrameric pyridoxal 4-dehydrogenase from Mesorhizobium loti
分子名称: 3-oxoacyl-(Acyl-carrier protein) reductase, ACETIC ACID, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Chu, H.N.
登録日2010-07-06
公開日2011-04-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.788 Å)
主引用文献The crystal structure of SDR-type pyridoxal 4-dehydrogenase of Mesorhizobium loti
Biosci.Biotechnol.Biochem., 75, 2011
2WL5
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BU of 2wl5 by Molmil
BIOSYNTHETIC THIOLASE FROM Z. RAMIGERA. COMPLEX OF THE H348N MUTANT WITH COENZYME A.
分子名称: ACETYL-COA ACETYLTRANSFERASE, CHLORIDE ION, COENZYME A, ...
著者Merilainen, G, Poikela, V, Kursula, P, Wierenga, R.K.
登録日2009-06-22
公開日2009-11-03
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The Thiolase Reaction Mechanism: The Importance of Asn316 and His348 for Stabilizing the Enolate Intermediate of the Claisen Condensation.
Biochemistry, 48, 2009
2WKV
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BU of 2wkv by Molmil
BIOSYNTHETIC THIOLASE FROM Z. RAMIGERA. COMPLEX OF THE N316D MUTANT WITH COENZYME A.
分子名称: ACETYL-COA ACETYLTRANSFERASE, COENZYME A, SODIUM ION, ...
著者Merilainen, G, Poikela, V, Kursula, P, Wierenga, R.K.
登録日2009-06-18
公開日2009-11-03
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The Thiolase Reaction Mechanism: The Importance of Asn316 and His348 for Stabilizing the Enolate Intermediate of the Claisen Condensation.
Biochemistry, 48, 2009
2WL4
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BU of 2wl4 by Molmil
BIOSYNTHETIC THIOLASE FROM Z. RAMIGERA. COMPLEX OF THE H348A MUTANT WITH COENZYME A.
分子名称: ACETYL-COA ACETYLTRANSFERASE, CHLORIDE ION, COENZYME A, ...
著者Merilainen, G, Poikela, V, Kursula, P, Wierenga, R.K.
登録日2009-06-22
公開日2009-11-03
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The Thiolase Reaction Mechanism: The Importance of Asn316 and His348 for Stabilizing the Enolate Intermediate of the Claisen Condensation.
Biochemistry, 48, 2009
2WKU
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BU of 2wku by Molmil
BIOSYNTHETIC THIOLASE FROM Z. RAMIGERA. THE N316H MUTANT.
分子名称: ACETYL-COA ACETYLTRANSFERASE, D-mannose, SULFATE ION
著者Merilainen, G, Poikela, V, Kursula, P, Wierenga, R.K.
登録日2009-06-18
公開日2009-11-03
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The Thiolase Reaction Mechanism: The Importance of Asn316 and His348 for Stabilizing the Enolate Intermediate of the Claisen Condensation.
Biochemistry, 48, 2009
3OCH
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BU of 3och by Molmil
Chemically Self-assembled Antibody Nanorings (CSANs): Design and Characterization of an Anti-CD3 IgM Biomimetic
分子名称: (2S,2'S)-5,5'-(nonane-1,9-diyldiimino)bis(2-{[(4-{[(2,4-diaminopteridin-6-yl)methyl](methyl)amino}phenyl)carbonyl]amino}-5-oxopentanoic acid) (non-preferred name), CHLORIDE ION, Dihydrofolate reductase, ...
著者Cody, V.
登録日2010-08-10
公開日2010-12-08
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Chemically Self-Assembled Antibody Nanorings (CSANs): Design and Characterization of an Anti-CD3 IgM Biomimetic.
J.Am.Chem.Soc., 132, 2010
2LY0
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BU of 2ly0 by Molmil
Solution NMR structure of the influenza A virus S31N mutant (19-49) in presence of drug M2WJ332
分子名称: (3S,5S,7S)-N-{[5-(thiophen-2-yl)-1,2-oxazol-3-yl]methyl}tricyclo[3.3.1.1~3,7~]decan-1-aminium, Membrane ion channel M2
著者Wu, Y, Wang, J, DeGrado, W.
登録日2012-09-10
公開日2013-01-09
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure and inhibition of the drug-resistant S31N mutant of the M2 ion channel of influenza A virus.
Proc.Natl.Acad.Sci.USA, 110, 2013
3A09
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BU of 3a09 by Molmil
Crystal structure of Sphingomonas sp. A1 alginate-binding protein AlgQ1 in complex with unsaturated trimannuronate
分子名称: 4-deoxy-alpha-L-erythro-hex-4-enopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-alpha-D-mannopyranuronic acid, AlgQ1, CALCIUM ION
著者Itoh, T, Mikami, B, Hashimoto, W, Murata, K.
登録日2009-03-12
公開日2010-03-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal structure of Sphingomonas sp. A1 alginate-binding protein AlgQ1 in complex with unsaturated trimannuronate
To be Published
8DLA
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BU of 8dla by Molmil
ClpP2 from Chlamydia trachomatis bound by MAS1-12
分子名称: 1-{4-[(4-chlorophenyl)methyl]piperazin-1-yl}-2-methyl-2-[5-(trifluoromethyl)pyridine-2-sulfonyl]propan-1-one, ATP-dependent Clp protease proteolytic subunit 2, GLYCEROL, ...
著者Azadmanesh, J, Struble, L.R, Seleem, M.A, Ouellette, S, Conda-Sheridan, M, Borgstahl, G.E.O.
登録日2022-07-07
公開日2023-08-09
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.66 Å)
主引用文献The structure of caseinolytic protease subunit ClpP2 reveals a functional model of the caseinolytic protease system from Chlamydia trachomatis.
J.Biol.Chem., 299, 2023
3ONZ
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BU of 3onz by Molmil
Human tetrameric hemoglobin: proximal nitrite ligand at beta
分子名称: Hemoglobin subunit alpha, Hemoglobin subunit beta, NITRITE ION, ...
著者Yi, J, Thormas, L.M, Safo, M.K, Musayev, F.N, Richter-Addo, G.B.
登録日2010-08-30
公開日2011-09-07
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.087 Å)
主引用文献Crystallographic Trapping of Heme Loss Intermediates during the Nitrite-Induced Degradation of Human Hemoglobin.
Biochemistry, 50, 2011
5N2U
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BU of 5n2u by Molmil
Influenza D virus nucleoprotein
分子名称: Nucleoprotein
著者Labaronne, A, Ruigrok, R.W.H, Crepin, T.
登録日2017-02-08
公開日2018-02-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The structure of the nucleoprotein of Influenza D shows that all Orthomyxoviridae nucleoproteins have a similar NPCORE, with or without a NPTAILfor nuclear transport.
Sci Rep, 9, 2019
1Q0Z
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BU of 1q0z by Molmil
Crystal structure of aclacinomycin methylesterase (RdmC) with bound product analogue, 10-decarboxymethylaclacinomycin A (DcmA)
分子名称: 10-DECARBOXYMETHYLACLACINOMYCIN A (DCMAA), PENTAETHYLENE GLYCOL, SULFATE ION, ...
著者Jansson, A, Niemi, J, Mantsala, P, Schneider, G, Structural Proteomics in Europe (SPINE)
登録日2003-07-18
公開日2003-11-25
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of aclacinomycin methylesterase with bound product analogues: implications for anthracycline recognition and mechanism.
J.Biol.Chem., 278, 2003
5MZ8
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BU of 5mz8 by Molmil
Crystal structure of aldehyde dehydrogenase 21 (ALDH21) from Physcomitrella patens in complex with the reaction product succinate
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Kopecny, D, Vigouroux, A, Briozzo, P, Morera, S.
登録日2017-01-31
公開日2017-08-09
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The ALDH21 gene found in lower plants and some vascular plants codes for a NADP(+) -dependent succinic semialdehyde dehydrogenase.
Plant J., 92, 2017
5MZ5
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BU of 5mz5 by Molmil
Crystal structure of aldehyde dehydrogenase 21 (ALDH21) from Physcomitrella patens in its apoform
分子名称: 1,2-ETHANEDIOL, ALDH21), DI(HYDROXYETHYL)ETHER, ...
著者Kopecny, D, Koncitikova, R, Briozzo, P, Morera, S.
登録日2017-01-30
公開日2017-08-09
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献The ALDH21 gene found in lower plants and some vascular plants codes for a NADP(+) -dependent succinic semialdehyde dehydrogenase.
Plant J., 92, 2017
8SSG
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BU of 8ssg by Molmil
Minimal protein-only/RNA-free Ribonuclease P from Hydrogenobacter thermophilus
分子名称: RNA-free ribonuclease P
著者Mendoza, J, Wilhelm, C.A, Mallik, L, Koutmos, M.
登録日2023-05-08
公開日2023-10-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Bacterial RNA-free RNase P: Structural and functional characterization of multiple oligomeric forms of a minimal protein-only ribonuclease P.
J.Biol.Chem., 299, 2023
1NKP
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BU of 1nkp by Molmil
Crystal structure of Myc-Max recognizing DNA
分子名称: 5'-D(*CP*GP*AP*GP*TP*AP*GP*CP*AP*CP*GP*TP*GP*CP*TP*AP*CP*TP*C)-3', Max protein, Myc proto-oncogene protein
著者Nair, S.K, Burley, S.K.
登録日2003-01-03
公開日2003-02-04
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献X-ray structures of Myc-Max and Mad-Max recognizing DNA: Molecular bases of regulation by proto-oncogenic transcription factors
Cell(Cambridge,Mass.), 112, 2003
3AZZ
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BU of 3azz by Molmil
Crystal structure of the laminarinase catalytic domain from Thermotoga maritima MSB8 in complex with gluconolactone
分子名称: CALCIUM ION, D-glucono-1,5-lactone, Laminarinase, ...
著者Jeng, W.Y, Wang, N.C, Wang, A.H.J.
登録日2011-06-03
公開日2011-11-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Crystal structures of the laminarinase catalytic domain from Thermotoga maritima MSB8 in complex with inhibitors: essential residues for beta-1,3 and beta-1,4 glucan selection.
J.Biol.Chem., 286, 2011
8H6S
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BU of 8h6s by Molmil
Structure of acyltransferase VinK in complex with the loading acyl carrier protein of vicenistatin PKS
分子名称: MAGNESIUM ION, Malonyl-CoA-[acyl-carrier-protein] transacylase, N-[2-(acetylamino)ethyl]-N~3~-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alaninamide, ...
著者Kawada, K, Miyanaga, A, Chisuga, T, Kudo, F, Eguchi, T.
登録日2022-10-18
公開日2022-12-21
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural Basis of Transient Interactions of Acyltransferase VinK with the Loading Acyl Carrier Protein of the Vicenistatin Modular Polyketide Synthase.
Biochemistry, 62, 2023
3B7L
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BU of 3b7l by Molmil
Human farnesyl diphosphate synthase complexed with MG and minodronate
分子名称: (1-HYDROXY-2-IMIDAZO[1,2-A]PYRIDIN-3-YLETHANE-1,1-DIYL)BIS(PHOSPHONIC ACID), Farnesyl pyrophosphate synthetase, MAGNESIUM ION
著者Pilka, E.S, Dunford, J.E, Guo, K, Pike, A.C.W, Kavanagh, K.L, von Delft, F, Ebetino, F.H, Arrowsmith, C.H, Edwards, A.M, Russell, R.G.G, Oppermann, U, Structural Genomics Consortium (SGC)
登録日2007-10-31
公開日2007-11-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Human farnesyl diphosphate synthase complexed with MG and minodronate.
TO BE PUBLISHED
5NE6
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BU of 5ne6 by Molmil
Crystal structure of dimeric TmPep1050 aminopeptidase
分子名称: AMINOPEPTIDASE, CITRIC ACID
著者Dutoit, R, Brandt, N, Bauvois, C.
登録日2017-03-10
公開日2018-05-16
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献How metal cofactors drive dimer-dodecamer transition of the M42 aminopeptidase TmPep1050 ofThermotoga maritima.
J.Biol.Chem., 294, 2019
3DO4
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BU of 3do4 by Molmil
Crystal structure of transthyretin variant T60A at acidic pH
分子名称: ACETATE ION, Transthyretin
著者Cendron, L, Zanotti, G, Folli, C, Berni, R.
登録日2008-07-03
公開日2009-07-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Amyloidogenic potential of transthyretin variants: Insights from structural and computational analyses
To be Published

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