PDB: 41522 件ウェブページステータス検索Chemie searchBIRD

---

7XFC	Structure of nucleosome-DI complex (-30I, Apo state) 分子名称: DNA (152-MER), Histone H2A type 1, Histone H2B 1.1, ... 著者 Zheng, L, Tsai, B, Gao, N. 登録日 2022-04-01 公開日 2023-04-19 最終更新日 2023-11-08 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Structural and mechanistic insights into the DNA glycosylase AAG-mediated base excision in nucleosome. Cell Discov, 9, 2023
4WO5	Crystal structure of a BRAF kinase domain monomer 分子名称: N-{3-[(5-chloro-1H-pyrrolo[2,3-b]pyridin-3-yl)carbonyl]-2,4-difluorophenyl}propane-1-sulfonamide, Serine/threonine-protein kinase B-raf 著者 Critton, D.A. 登録日 2014-10-15 公開日 2014-12-03 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.83 Å) 主引用文献 Crystal structure of a BRAF kinase domain monomer explains basis for allosteric regulation. Nat.Struct.Mol.Biol., 22, 2015
3PC8	X-ray crystal structure of the heterodimeric complex of XRCC1 and DNA ligase III-alpha BRCT domains. 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DNA ligase 3, DNA repair protein XRCC1, ... 著者 Cuneo, M.J, Krahn, J.M, London, R.E. 登録日 2010-10-21 公開日 2011-06-15 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.31 Å) 主引用文献 The structural basis for partitioning of the XRCC1/DNA ligase III-{alpha} BRCT-mediated dimer complexes. Nucleic Acids Res., 39, 2011
7XFI	Structure of nucleosome-DI complex (-50I, Apo state) 分子名称: DNA (152-MER), Histone H2A type 1, Histone H2B 1.1, ... 著者 Zheng, L, Tsai, B, Gao, N. 登録日 2022-04-01 公開日 2023-04-19 最終更新日 2023-11-08 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Structural and mechanistic insights into the DNA glycosylase AAG-mediated base excision in nucleosome. Cell Discov, 9, 2023
7UN6	Complex of UBE2O with NAP1L1 分子名称: (E3-independent) E2 ubiquitin-conjugating enzyme, Nucleosome assembly protein 1-like 1 著者 Yip, M.C.J, Sedor, S.F, Shao, S. 登録日 2022-04-09 公開日 2022-08-03 最終更新日 2024-02-14 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Mechanism of client selection by the protein quality-control factor UBE2O. Nat.Struct.Mol.Biol., 29, 2022
6PU6	CobT from Methanocaldococcus jannaschii in complex with Alpha-Ribozole 5'-Phosphate, Nicotinic Acid, and Nicotinic Acid Mononucleotide 分子名称: ALPHA-RIBAZOLE-5'-PHOSPHATE, NICOTINATE MONONUCLEOTIDE, NICOTINIC ACID, ... 著者 Schwarzwalder, A.H, Jeter, V.L, Vecellio, A.A, Erpenbach, E, Escalante-Semerena, J.C, Rayment, I. 登録日 2019-07-17 公開日 2020-07-22 最終更新日 2024-04-10 実験手法 X-RAY DIFFRACTION (2.293 Å) 主引用文献 Structural studies of the phosphoribosyltransferase involved in cobamide biosynthesis in methanogenic archaea and cyanobacteria. Sci Rep, 12, 2022
2BVL	Crystal structure of the catalytic domain of toxin B from Clostridium difficile in complex with UDP, Glc and manganese ion 分子名称: HEXATANTALUM DODECABROMIDE, MANGANESE (II) ION, SULFATE ION, ... 著者 Reinert, D.J, Jank, T, Aktories, K, Schulz, G.E. 登録日 2005-06-30 公開日 2005-08-03 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural Basis for the Function of Clostridium Difficile Toxin B. J.Mol.Biol., 351, 2005
4YED	TcdA (CsdL) 分子名称: ADENOSINE MONOPHOSPHATE, GLYCEROL, tRNA threonylcarbamoyladenosine dehydratase 著者 Kim, S, Park, S.Y. 登録日 2015-02-24 公開日 2016-01-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 The Structure of Escherichia coli TcdA (Also Known As CsdL) Reveals a Novel Topology and Provides Insight into the tRNA Binding Surface Required for N(6)-Threonylcarbamoyladenosine Dehydratase Activity J.Mol.Biol., 427, 2015
7UN3	Complex of UBE2O with NAP1L1 and ubiquitylated uL2 分子名称: Nucleosome assembly protein 1-like 1, Ubiquitin,60S ribosomal protein L8,(E3-independent) E2 ubiquitin-conjugating enzyme fusion 著者 Yip, M.C.J, Sedor, S.F, Shao, S. 登録日 2022-04-08 公開日 2022-08-03 最終更新日 2024-02-14 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Mechanism of client selection by the protein quality-control factor UBE2O. Nat.Struct.Mol.Biol., 29, 2022
6ZRD	STRUCTURE OF THE HUMAN RBAP48 in complex with a macrocyclic peptide cyclized via a xylene linker attached to two cysteines 分子名称: 1,3,5-trimethylbenzene, Histone-binding protein RBBP4, macrocyclic peptide based on residues 659-672 of the metastasis-associated protein MTA1 著者 Vetter, I.R, Porfetye, A.T. 登録日 2020-07-13 公開日 2020-12-02 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structure Based Design of Bicyclic Peptide Inhibitors of RbAp48. Angew.Chem.Int.Ed.Engl., 60, 2021
7PT7	Structure of MCM2-7 DH complexed with Cdc7-Dbf4 in the presence of ADP:BeF3, state I 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Cell division control protein 7, ... 著者 Saleh, A, Noguchi, Y, Aramayo, R, Ivanova, M.E, Speck, C. 登録日 2021-09-26 公開日 2022-06-08 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 The structural basis of Cdc7-Dbf4 kinase dependent targeting and phosphorylation of the MCM2-7 double hexamer. Nat Commun, 13, 2022
7PT6	Structure of MCM2-7 DH complexed with Cdc7-Dbf4 in the presence of ATPgS, state III 分子名称: ADENOSINE-5'-DIPHOSPHATE, Cell division control protein 7, DDK kinase regulatory subunit DBF4, ... 著者 Saleh, A, Noguchi, Y, Aramayo, R, Ivanova, M.E, Speck, C. 登録日 2021-09-26 公開日 2022-06-08 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 The structural basis of Cdc7-Dbf4 kinase dependent targeting and phosphorylation of the MCM2-7 double hexamer. Nat Commun, 13, 2022
8PEP	H3K36me2 nucleosome-LEDGF/p75 PWWP domain complex - pose 2 分子名称: Histone H2A, Histone H2B 1.1, Histone H3, ... 著者 Koutna, E, Kouba, T, Veverka, V. 登録日 2023-06-14 公開日 2023-08-16 最終更新日 2023-11-15 実験手法 ELECTRON MICROSCOPY (3.33 Å) 主引用文献 Multivalency of nucleosome recognition by LEDGF. Nucleic Acids Res., 51, 2023
6Q16	Focussed refinement of InvGN0N1:PrgHK:SpaPQR:PrgIJ from Salmonella SPI-1 injectisome NC-base 分子名称: Lipoprotein PrgK, Protein InvG, Protein PrgH, ... 著者 Hu, J, Worrall, L.J, Strynadka, N.C.J. 登録日 2019-08-02 公開日 2019-10-23 最終更新日 2020-01-15 実験手法 ELECTRON MICROSCOPY (4.1 Å) 主引用文献 T3S injectisome needle complex structures in four distinct states reveal the basis of membrane coupling and assembly. Nat Microbiol, 4, 2019
6Q76	Complex of rice blast (Magnaporthe oryzae) effector protein AVR-Pia with the HMA domain of Pikp-1 from rice (Oryza sativa) 分子名称: AVR-Pia protein, Resistance protein Pikp-1 著者 Varden, F.A, Banfield, M.J. 登録日 2018-12-12 公開日 2019-07-10 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Cross-reactivity of a rice NLR immune receptor to distinct effectors from the rice blast pathogenMagnaporthe oryzaeprovides partial disease resistance. J.Biol.Chem., 294, 2019
3Q9L	The structure of the dimeric E.coli MinD-ATP complex 分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Septum site-determining protein minD 著者 Wu, W, Park, K.-T, Lutkenhaus, J, Holyoak, T. 登録日 2011-01-08 公開日 2011-01-26 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.343 Å) 主引用文献 Determination of the structure of the MinD-ATP complex reveals the orientation of MinD on the membrane and the relative location of the binding sites for MinE and MinC. Mol.Microbiol., 79, 2011
8PC5	H3K36me3 nucleosome-LEDGF/p75 PWWP domain complex 分子名称: Histone H2A, Histone H2B 1.1, Histone H3, ... 著者 Koutna, E, Kouba, T, Veverka, V. 登録日 2023-06-09 公開日 2023-08-16 最終更新日 2023-11-15 実験手法 ELECTRON MICROSCOPY (3.02 Å) 主引用文献 Multivalency of nucleosome recognition by LEDGF. Nucleic Acids Res., 51, 2023
7QE5	Structure of the membrane domains of the sialic acid TRAP transporter HiSiaQM from Haemophilus influenzae 分子名称: Megabody3, Sialic acid TRAP transporter permease protein SiaT 著者 Peter, M.F, Hagelueken, G. 登録日 2021-12-01 公開日 2022-07-27 最終更新日 2022-08-17 実験手法 ELECTRON MICROSCOPY (4.7 Å) 主引用文献 Structural and mechanistic analysis of a tripartite ATP-independent periplasmic TRAP transporter. Nat Commun, 13, 2022
7QD8	Cryo-EM structure of Tn4430 TnpA transposase from Tn3 family in apo state 分子名称: Transposase for transposon Tn4430 著者 Shkumatov, A.V, Oger, C.A, Aryanpour, N, Hallet, B.F, Efremov, R.G. 登録日 2021-11-26 公開日 2022-10-26 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structural insight into Tn3 family transposition mechanism. Nat Commun, 13, 2022
1GG2	G PROTEIN HETEROTRIMER MUTANT GI_ALPHA_1(G203A) BETA_1 GAMMA_2 WITH GDP BOUND 分子名称: G PROTEIN GI ALPHA 1, G PROTEIN GI BETA 1, G PROTEIN GI GAMMA 2, ... 著者 Wall, M.A, Sprang, S.R. 登録日 1996-11-13 公開日 1997-02-12 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 The structure of the G protein heterotrimer Gi alpha 1 beta 1 gamma 2. Cell(Cambridge,Mass.), 83, 1995
7QD4	Cryo-EM structure of Tn4430 TnpA transposase from Tn3 family in complex with 100 bp long transposon end DNA 分子名称: IR100 DNA substrate, none transferred strand, transferred strand, ... 著者 Shkumatov, A.V, Oger, C.A, Aryanpour, N, Hallet, B.F, Efremov, R.G. 登録日 2021-11-26 公開日 2022-10-26 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Structural insight into Tn3 family transposition mechanism. Nat Commun, 13, 2022
3QQO	Crystal structure of HA2 R106H mutant of H2 hemagglutinin, acidic pH form 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin 著者 Xu, R, Wilson, I.A. 登録日 2011-02-15 公開日 2011-03-09 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Structural Characterization of an Early Fusion Intermediate of Influenza Virus Hemagglutinin. J.Virol., 85, 2011
8PEO	H3K36me2 nucleosome-LEDGF/p75 PWWP domain complex 分子名称: (2R)-2-amino-3-(2-dimethylaminoethylsulfanyl)propanoic acid, Histone H2A, Histone H2B 1.1, ... 著者 Koutna, E, Kouba, T, Veverka, V. 登録日 2023-06-14 公開日 2023-08-16 最終更新日 2023-11-15 実験手法 ELECTRON MICROSCOPY (2.69 Å) 主引用文献 Multivalency of nucleosome recognition by LEDGF. Nucleic Acids Res., 51, 2023
6ZDT	Crystal structure of eukaryotic Fibrillarin with Nop56 N-terminal domain 分子名称: Nucleolar protein 56, rRNA 2'-O-methyltransferase fibrillarin 著者 Hoefler, S, Lukat, P, Carlomagno, T, Blankenfeldt, W. 登録日 2020-06-15 公開日 2021-02-03 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.71 Å) 主引用文献 High-resolution structure of eukaryotic Fibrillarin interacting with Nop56 amino-terminal domain. Rna, 27, 2021
7QDO	Cryo-EM structure of human monomeric IgM-Fc 分子名称: Isoform 2 of Immunoglobulin heavy constant mu 著者 Chen, Q, Rosenthal, P, Tolar, P. 登録日 2021-11-27 公開日 2022-10-26 最終更新日 2022-11-09 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Cryomicroscopy reveals the structural basis for a flexible hinge motion in the immunoglobulin M pentamer. Nat Commun, 13, 2022

<752753754755756757758759760761762763764765766767>