PDB: 7404 件ウェブページステータス検索Chemie searchBIRD

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8PFR	Mouse RPL39L integrated into the yeast 60S ribosomal subunit 分子名称: 25S rRNA, 5.8S rRNA, 5S rRNA, ... 著者 Rabl, J, Banerjee, A, Boehringer, D, Zavolan, M. 登録日 2023-06-16 公開日 2024-06-26 実験手法 ELECTRON MICROSCOPY (2.15 Å) 主引用文献 Mouse RPL39L integrated into the yeast 60S ribosomal subunit To Be Published
8P8N	Mouse RPL39 integrated into the yeast 60S ribosomal subunit 分子名称: 25S rRNA, 5.8S rRNA, 5S rRNA, ... 著者 Rabl, J, Banerjee, A, Boehringer, D, Zavolan, M. 登録日 2023-06-02 公開日 2024-06-12 実験手法 ELECTRON MICROSCOPY (2.15 Å) 主引用文献 Yeast 60S ribosomal subunit, RPL39 deletion To Be Published
8P8U	Yeast 60S ribosomal subunit 分子名称: 25S rRNA, 5.8S rRNA, 5S rRNA, ... 著者 Rabl, J, Banerjee, A, Boehringer, D, Zavolan, M. 登録日 2023-06-02 公開日 2024-06-12 実験手法 ELECTRON MICROSCOPY (2.23 Å) 主引用文献 Yeast 60S ribosomal subunit To Be Published
3R3T	Crystal Structure of 30S Ribosomal Protein S from Bacillus anthracis 分子名称: 30S ribosomal protein S6, CALCIUM ION, GLYCEROL, ... 著者 Kim, Y, Zhou, M, Kwon, K, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2011-03-16 公開日 2011-03-30 最終更新日 2018-01-24 実験手法 X-RAY DIFFRACTION (2.302 Å) 主引用文献 Crystal Structure of 30S Ribosomal Protein S from Bacillus anthracis To be Published
6ZOJ	SARS-CoV-2-Nsp1-40S complex, composite map 分子名称: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ... 著者 Schubert, K, Karousis, E.D, Jomaa, A, Scaiola, A, Echeverria, B, Gurzeler, L.-A, Leibundgut, M.L, Thiel, V, Muehlemann, O, Ban, N. 登録日 2020-07-07 公開日 2020-07-22 最終更新日 2021-02-10 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 SARS-CoV-2 Nsp1 binds the ribosomal mRNA channel to inhibit translation. Nat.Struct.Mol.Biol., 27, 2020
6ZOL	SARS-CoV-2-Nsp1-40S complex, focused on head 分子名称: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S12, ... 著者 Schubert, K, Karousis, E.D, Jomaa, A, Scaiola, A, Echeverria, B, Gurzeler, L.-A, Leibundgut, M.L, Thiel, V, Muehlemann, O, Ban, N. 登録日 2020-07-07 公開日 2020-07-22 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 SARS-CoV-2 Nsp1 binds the ribosomal mRNA channel to inhibit translation. Nat.Struct.Mol.Biol., 27, 2020
2JX5	Solution structure of the ubiquitin domain N-terminal to the S27a ribosomal subunit of Giardia lamblia 分子名称: GlUb(S27a) 著者 Catic, A, Sun, Z.J, Ratner, D.M, Misaghi, S, Spooner, E, Samuelson, J, Wagner, G, Ploegh, H.L. 登録日 2007-11-07 公開日 2007-12-04 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Sequence and structure evolved separately in a ribosomal ubiquitin variant EMBO J., 26, 2007
6ZOK	SARS-CoV-2-Nsp1-40S complex, focused on body 分子名称: 18S ribosomal RNA, 40S ribosomal protein S11, 40S ribosomal protein S13, ... 著者 Schubert, K, Karousis, E.D, Jomaa, A, Scaiola, A, Echeverria, B, Gurzeler, L.-A, Leibundgut, M, Thiel, V, Muehlemann, O, Ban, N. 登録日 2020-07-07 公開日 2020-07-29 最終更新日 2021-02-10 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 SARS-CoV-2 Nsp1 binds the ribosomal mRNA channel to inhibit translation. Nat.Struct.Mol.Biol., 27, 2020
2CQL	Solution structure of the N-terminal domain of human ribosomal protein L9 分子名称: 60S ribosomal protein L9 著者 Suzuki, S, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2005-05-20 公開日 2005-11-20 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Solution structure of the N-terminal domain of human ribosomal protein L9 To be Published
6PRV	58nt RNA L11-binding domain from E. coli 23S rRNA 分子名称: 23S rRNA, MAGNESIUM ION, POTASSIUM ION 著者 Conn, G.L, Dunstan, M.S. 登録日 2019-07-11 公開日 2020-01-08 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.71 Å) 主引用文献 Ribosomal Protein L11 Selectively Stabilizes a Tertiary Structure of the GTPase Center rRNA Domain. J.Mol.Biol., 432, 2020
1U2R	Crystal Structure of ADP-ribosylated Ribosomal Translocase from Saccharomyces cerevisiae 分子名称: ADENOSINE-5-DIPHOSPHORIBOSE, Elongation factor 2, GUANOSINE-5'-DIPHOSPHATE, ... 著者 Jorgensen, R, Yates, S.P, Nilsson, J, Prentice, G.A, Teal, D.J, Merrill, A.R, Andersen, G.R. 登録日 2004-07-20 公開日 2004-09-14 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Crystal Structure of ADP-ribosylated Ribosomal Translocase from Saccharomyces cerevisiae J.Biol.Chem., 279, 2004
8PHB	Crystal structure of apo Cami1 分子名称: CRISPR-associated protein, APE2256 family 著者 Tamulaitiene, G, Tamulaitis, G, Mogila, I, Keda, K. 登録日 2023-06-19 公開日 2023-12-13 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Ribosomal stalk-captured CARF-RelE ribonuclease inhibits translation following CRISPR signaling. Science, 382, 2023
8K4E	Cryo-EM structure of 30S ribosome with cleaved AP-mRNA bound complex-II 分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Ramachandran, R, Afsar, M, Shukla, A. 登録日 2023-07-18 公開日 2024-07-24 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Cryo-EM structure of 30S ribosome with cleaved AP-mRNA bound complex-II To Be Published
8K3O	Cryo-EM structure of 30S ribosome with cleaved AP-mRNA bound complex I 分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Afsar, M, Shukla, A, Ramachandran, R. 登録日 2023-07-16 公開日 2024-07-24 実験手法 ELECTRON MICROSCOPY (3.88 Å) 主引用文献 Cryo-EM structure of 30S ribosome with cleaved AP-mRNA bound complex I To Be Published
2RCN	Crystal Structure of the Ribosomal interacting GTPase YjeQ from the Enterobacterial species Salmonella Typhimurium. 分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Probable GTPase engC, ... 著者 Nichols, C.E, Stammers, D.K. 登録日 2007-09-20 公開日 2008-01-29 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Structure of the ribosomal interacting GTPase YjeQ from the enterobacterial species Salmonella typhimurium. Acta Crystallogr.,Sect.F, 63, 2007
1FYP	EUKARYOTIC DECODING REGION A-SITE RNA-PAROMOMYCIN COMPLEX 分子名称: FRAGMENT OF 18S RIBOSOMAL RNA, PAROMOMYCIN 著者 Lynch, S.R, Puglisi, J.D. 登録日 2000-10-02 公開日 2001-03-14 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Structural origins of aminoglycoside specificity for prokaryotic ribosomes. J.Mol.Biol., 306, 2001
8J60	Structural and mechanistic insight into ribosomal ITS2 RNA processing by nuclease-kinase machinery 分子名称: LAS1 protein, Polynucleotide 5'-hydroxyl-kinase GRC3 著者 Chen, J, Chen, H, Li, S, Lin, X, Hu, R, Zhang, K, Liu, L. 登録日 2023-04-24 公開日 2024-01-17 最終更新日 2024-10-16 実験手法 ELECTRON MICROSCOPY (3.39 Å) 主引用文献 Structural and mechanistic insights into ribosomal ITS2 RNA processing by nuclease-kinase machinery. Elife, 12, 2024
8J5Y	Structural and mechanistic insight into ribosomal ITS2 RNA processing by nuclease-kinase machinery 分子名称: LAS1 isoform 1, Polynucleotide 5'-hydroxyl-kinase GRC3 著者 Chen, J, Chen, H, Li, S, Lin, X, Hu, R, Zhang, K, Liu, L. 登録日 2023-04-24 公開日 2024-01-17 実験手法 ELECTRON MICROSCOPY (3.07 Å) 主引用文献 Structural and mechanistic insights into ribosomal ITS2 RNA processing by nuclease-kinase machinery. Elife, 12, 2024
8OEQ	Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (250uM) 分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 3-O-acetyl-2-O-(3-O-acetyl-6-deoxy-beta-D-glucopyranosyl)-6-deoxy-1-O-{[(2R,2'S,3a'R,4''S,5''R,6'S,7a'S)-5''-methyl-4''-{[(2E)-3-phenylprop-2-enoyl]oxy}decahydrodispiro[oxirane-2,3'-[1]benzofuran-2',2''-pyran]-6'-yl]carbonyl}-beta-D-glucopyranose, ... 著者 Kolosova, O, Zgadzay, Y, Yusupov, M. 登録日 2023-03-12 公開日 2024-09-25 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Drug-induced rotational movement of the ribosome is a key factor for read-through enhancement To Be Published
7JVS	Crystal Structure of an Essential Ribosomal Processing Protease Prp from S. aureus in complex with a Substrate Peptide 分子名称: CALCIUM ION, L27 ribosomal peptide, NICKEL (II) ION, ... 著者 Wright, H.T, Peterson, D. 登録日 2020-08-22 公開日 2021-09-01 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal Structure of an Essential Ribosomal Processing Protease Prp from S. aureus in complex with a Substrate Peptide To be published
8E5T	Yeast co-transcriptional Noc1-Noc2 RNP assembly checkpoint intermediate 分子名称: 25S ribosomal RNA, 5.8S ribosomal RNA, 60S ribosomal protein L13-A, ... 著者 Sanghai, Z.A, Piwowarczyk, R, Vanden Broeck, A, Klinge, S. 登録日 2022-08-22 公開日 2023-04-12 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 A co-transcriptional ribosome assembly checkpoint controls nascent large ribosomal subunit maturation. Nat.Struct.Mol.Biol., 30, 2023
3A1P	Structure of Ribosome maturation protein RimM and Ribosomal protein S19 分子名称: 30S ribosomal protein S19, Ribosome maturation factor rimM, UNKNOWN ATOM OR ION 著者 Kaminishi, T, Takemoto, C, Tatsuguchi, A, Kawazoe, M, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2009-04-21 公開日 2010-04-21 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure of Ribosome maturation protein RimM and Ribosomal protein S19 To be Published
1FQZ	NMR VALIDATED MODEL OF DOMAIN IIID OF HEPATITIS C VIRUS INTERNAL RIBOSOME ENTRY SITE 分子名称: HEPATITIS C VIRUS IRES DOMAIN IIID 著者 Klinck, R, Westhof, E, Walker, S, Afshar, M, Collier, A, Aboul-ela, F. 登録日 2000-09-07 公開日 2001-01-17 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 A potential RNA drug target in the hepatitis C virus internal ribosomal entry site. RNA, 6, 2000
5XYU	Small subunit of Mycobacterium smegmatis ribosome 分子名称: 16S RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Li, Z, Zhang, Y, Zheng, L, Ge, X, Sanyal, S, Gao, N. 登録日 2017-07-10 公開日 2017-09-27 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.45 Å) 主引用文献 Cryo-EM structure of Mycobacterium smegmatis ribosome reveals two unidentified ribosomal proteins close to the functional centers. Protein Cell, 9, 2018
4XY7	Crystal structure of the complex of ribosome inactivating protein from Momordica balsamina with N-acetylglucosamine at 2.5 A resolution 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Ribosome inactivating protein 著者 Yamini, S, Pandey, S, Kaur, P, Sharma, S, Singh, T.P. 登録日 2015-02-02 公開日 2015-09-23 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal structure of the complex of ribosome inactivating protein from Momordica balsamina with N- acetylglucosamine at 2.5 A resolution To Be Published

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