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PDB: 8 results

1ANR
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CIS-ACTING RNA REGULATORY ELEMENT (HIV-1 TAR), NMR, 20 STRUCTURES
Descriptor: RNA REGULATORY ELEMENT TAR
Authors:Aboul-Ela, F, Varani, G, Karn, J.
Deposit date:1996-07-06
Release date:1997-01-11
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Structure of HIV-1 TAR RNA in the absence of ligands reveals a novel conformation of the trinucleotide bulge.
Nucleic Acids Res., 24, 1996
1ARJ
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ARG-BOUND TAR RNA, NMR
Descriptor: ARGININE, TAR RNA
Authors:Aboul-Ela, F, Varani, G, Karn, J.
Deposit date:1995-08-30
Release date:1996-11-08
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:The structure of the human immunodeficiency virus type-1 TAR RNA reveals principles of RNA recognition by Tat protein.
J.Mol.Biol., 253, 1995
1FQZ
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BU of 1fqz by Molmil
NMR VALIDATED MODEL OF DOMAIN IIID OF HEPATITIS C VIRUS INTERNAL RIBOSOME ENTRY SITE
Descriptor: HEPATITIS C VIRUS IRES DOMAIN IIID
Authors:Klinck, R, Westhof, E, Walker, S, Afshar, M, Collier, A, Aboul-ela, F.
Deposit date:2000-09-07
Release date:2001-01-17
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:A potential RNA drug target in the hepatitis C virus internal ribosomal entry site.
RNA, 6, 2000
1KP7
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Conserved RNA Structure within the HCV IRES eIF3 Binding Site
Descriptor: Hepatitis C Virus Internal Ribosome Entry Site Fragment
Authors:Gallego, J, Klinck, R, Collier, A.J, Cole, P.T, Harris, S.J, Harrison, G.P, Aboul-ela, F, Walker, S, Varani, G.
Deposit date:2001-12-29
Release date:2002-04-10
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:A conserved RNA structure within the HCV IRES eIF3-binding site.
Nat.Struct.Biol., 9, 2002
1OLN
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Model for thiostrepton antibiotic binding to L11 substrate from 50S ribosomal RNA
Descriptor: 50S RIBOSOMAL PROTEIN L11, RNA, THIOSTREPTON
Authors:Lentzen, G, Klinck, R, Matassova, N, Aboul-Ela, F, Murchie, A.I.H.
Deposit date:2003-08-08
Release date:2003-09-11
Last modified:2019-08-21
Method:SOLUTION NMR, THEORETICAL MODEL
Cite:Structural Basis for Contrasting Activities of Ribosome Binding Thiazole Antibiotics
Chem.Biol., 10, 2003
1UUD
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NMR structure of a synthetic small molecule, rbt203, bound to HIV-1 TAR RNA
Descriptor: N-[2-(2-{[(4-{[AMINO(IMINO)METHYL]AMINO}BUTYL)AMINO]METHYL}-4-METHOXYPHENOXY)ETHYL]GUANIDINE, RNA (5'-(*GP*GP*CP*AP*GP*AP*UP*CP*UP*GP*AP*GP *CP*CP*UP*GP*GP*GP*AP*GP*CP*UP*CP*UP*CP*UP*GP*CP*C) -3')
Authors:Davis, B, Afshar, M, Varani, G, Karn, J, Murchie, A.I.H, Lentzen, G, Drysdale, M.J, Potter, A.J, Bower, J, Aboul-Ela, F.
Deposit date:2003-12-18
Release date:2004-03-15
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Rational Design of Inhibitors of HIV-1 Tar RNA Through the Stabilisation of Electrostatic "Hot Spots"
J.Mol.Biol., 336, 2004
1UUI
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NMR structure of a synthetic small molecule, rbt158, bound to HIV-1 TAR RNA
Descriptor: 4-[AMINO(IMINO)METHYL]-1-[2-(3-AMMONIOPROPOXY)-5-METHOXYBENZYL]PIPERAZIN-1-IUM, 5'-R(*GP*GP*CP*AP*GP*AP*UP*CP*UP*GP*AP*GP*CP* CP*UP*GP*GP*GP*AP*GP*CP*UP*CP*UP*CP*UP*GP*CP*C)-3'
Authors:Davis, B, Afshar, M, Varani, G, Karn, J, Murchie, A.I.H, Lentzen, G, Drysdale, M.J, Potter, A.J, Bower, J, Aboul-Ela, F.
Deposit date:2003-12-19
Release date:2004-02-12
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Rational Design of Inhibitors of HIV-1 Tar RNA Through the Stabilisation of Electrostatic "Hot Spots"
J.Mol.Biol., 336, 2004
1UTS
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Designed HIV-1 TAR Binding Ligand
Descriptor: N-[2-(3-AMINOPROPOXY)-5-(1H-INDOL-5-YL)BENZYL]-N-(2-PIPERAZIN-1-YLETHYL)AMINE, RNA (5'-(*GP*GP*CP*AP*GP*AP*UP*CP*UP*GP*AP*GP *CP*CP*UP*GP*GP*GP*AP*GP*CP*UP*CP*UP*CP*UP*GP*CP*C) -3')
Authors:Davis, B, Murchie, A.I.H, Aboul-Ela, F, Karn, J.
Deposit date:2003-12-10
Release date:2004-02-12
Last modified:2021-05-05
Method:SOLUTION NMR
Cite:Structure-based drug design targeting an inactive RNA conformation: exploiting the flexibility of HIV-1 TAR RNA.
J.Mol.Biol., 336, 2004

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