1JIS
 
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1JIY
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1JKC
 | | HUMAN LYSOZYME MUTANT WITH TRP 109 REPLACED BY PHE | | 分子名称: | LYSOZYME, NITRATE ION | | 著者 | Muraki, M, Harata, K, Goda, S, Nagahora, H. | | 登録日 | 1996-11-13 | | 公開日 | 1997-05-15 | | 最終更新日 | 2023-08-09 | | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | | 主引用文献 | Importance of van der Waals contact between Glu 35 and Trp 109 to the catalytic action of human lysozyme.
Protein Sci., 6, 1997
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1JOX
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7BIM
 | | A de novo designed nonameric coiled coil, CC-Type2-(GgLaId)4 | | 分子名称: | GLYCEROL, ISOPROPYL ALCOHOL, Nonameric de novo coiled coil CC-Type2-(GgLaId)4 | | 著者 | Shelley, K.L, Rhys, G.G, Dawson, W.M, Brady, R.L, Woolfson, D.N. | | 登録日 | 2021-01-12 | | 公開日 | 2021-04-21 | | 最終更新日 | 2021-11-17 | | 実験手法 | X-RAY DIFFRACTION (1.64 Å) | | 主引用文献 | Coiled coils 9-to-5: rational de novo design of alpha-helical barrels with tunable oligomeric states.
Chem Sci, 12, 2021
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1JKR
 | | Testing the Water-Mediated HIN Recombinase DNA Recognition by Systematic Mutations | | 分子名称: | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5'-D(*AP*TP*CP*TP*TP*GP*TP*CP*AP*AP*AP*AP*AP*C)-3', 5'-D(*TP*GP*TP*TP*TP*TP*TP*GP*AP*CP*AP*AP*GP*A)-3', ... | | 著者 | Chiu, T.K, Sohn, C, Johnson, R.C, Dickerson, R.E. | | 登録日 | 2001-07-13 | | 公開日 | 2002-02-22 | | 最終更新日 | 2023-08-16 | | 実験手法 | X-RAY DIFFRACTION (2.28 Å) | | 主引用文献 | Testing water-mediated DNA recognition by the Hin recombinase.
EMBO J., 21, 2002
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6E5I
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6HPJ
 | | Structure of human SRSF1 RRM1 bound to AACAAA RNA | | 分子名称: | Immunoglobulin G-binding protein G,Serine/arginine-rich splicing factor 1, RNA (5'-R(*AP*AP*CP*AP*AP*A)-3') | | 著者 | Allain, F.T.H, Clery, A. | | 登録日 | 2018-09-21 | | 公開日 | 2020-11-18 | | 最終更新日 | 2024-05-15 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Structure of SRSF1 RRM1 bound to RNA reveals an unexpected bimodal mode of interaction and explains its involvement in SMN1 exon7 splicing.
Nat Commun, 12, 2021
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6HSV
 | | Engineered higher-order assembly of Cholera Toxin B subunits via the addition of C-terminal parallel coiled-coiled domains | | 分子名称: | (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, PHOSPHATE ION, ... | | 著者 | Pearson, A.R, Turnbull, W.B, Ross, J.F, Trinh, C.H, Webb, M.E. | | 登録日 | 2018-10-01 | | 公開日 | 2019-03-20 | | 最終更新日 | 2024-01-24 | | 実験手法 | X-RAY DIFFRACTION (2.45 Å) | | 主引用文献 | Directed Assembly of Homopentameric Cholera Toxin B-Subunit Proteins into Higher-Order Structures Using Coiled-Coil Appendages.
J.Am.Chem.Soc., 141, 2019
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6ERL
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1KD4
 | | The Crystal Structure of r(GGUCACAGCCC)2, Barium form | | 分子名称: | 5'-R(*GP*GP*UP*CP*AP*CP*AP*GP*CP*CP*C)-3', BARIUM ION | | 著者 | Kacer, V, Scaringe, S.A, Scarsdale, J.N, Rife, J.P. | | 登録日 | 2001-11-12 | | 公開日 | 2003-03-04 | | 最終更新日 | 2024-02-07 | | 実験手法 | X-RAY DIFFRACTION (1.85 Å) | | 主引用文献 | Crystal structures of r(GGUCACAGCCC)2.
Acta Crystallogr.,Sect.D, 59, 2003
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6GXU
 | | Crystal structure of Schistosoma mansoni HDAC8 complexed with an hydroxamate 3 | | 分子名称: | (~{E})-3-[2-(4-chlorophenyl)sulfanylphenyl]-~{N}-oxidanyl-prop-2-enamide, DIMETHYLFORMAMIDE, GLYCEROL, ... | | 著者 | Shaik, T.B, Marek, M, Romier, C. | | 登録日 | 2018-06-27 | | 公開日 | 2018-08-15 | | 最終更新日 | 2024-01-17 | | 実験手法 | X-RAY DIFFRACTION (1.917 Å) | | 主引用文献 | Synthesis, Crystallization Studies, and in vitro Characterization of Cinnamic Acid Derivatives as SmHDAC8 Inhibitors for the Treatment of Schistosomiasis.
ChemMedChem, 13, 2018
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1KLQ
 | | The Mad2 Spindle Checkpoint Protein Undergoes Similar Major Conformational Changes upon Binding to Either Mad1 or Cdc20 | | 分子名称: | MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2A, Mad2-binding peptide | | 著者 | Luo, X, Tang, Z, Rizo, J, Yu, H. | | 登録日 | 2001-12-12 | | 公開日 | 2002-01-25 | | 最終更新日 | 2024-05-22 | | 実験手法 | SOLUTION NMR | | 主引用文献 | The Mad2 spindle checkpoint protein undergoes similar major conformational changes upon binding to either Mad1 or Cdc20.
Mol.Cell, 9, 2002
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7CNF
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3SYS
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6H1K
 | | The major G-quadruplex form of HIV-1 LTR | | 分子名称: | DNA (28-MER) | | 著者 | Phan, A.T, Heddi, B, Butovskaya, E, Bakalar, B, Richter, S.N. | | 登録日 | 2018-07-11 | | 公開日 | 2018-10-17 | | 最終更新日 | 2024-06-19 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Major G-Quadruplex Form of HIV-1 LTR Reveals a (3 + 1) Folding Topology Containing a Stem-Loop.
J. Am. Chem. Soc., 140, 2018
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1JMC
 | | SINGLE STRANDED DNA-BINDING DOMAIN OF HUMAN REPLICATION PROTEIN A BOUND TO SINGLE STRANDED DNA, RPA70 SUBUNIT, RESIDUES 183-420 | | 分子名称: | DNA (5'-D(*CP*CP*CP*CP*CP*CP*CP*C)-3'), PROTEIN (REPLICATION PROTEIN A (RPA)) | | 著者 | Bochkarev, A, Pfuetzner, R, Edwards, A, Frappier, L. | | 登録日 | 1996-11-11 | | 公開日 | 1997-10-16 | | 最終更新日 | 2011-07-13 | | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | | 主引用文献 | Structure of the single-stranded-DNA-binding domain of replication protein A bound to DNA.
Nature, 385, 1997
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6KGX
 | | Structure of the phycobilisome from the red alga Porphyridium purpureum | | 分子名称: | Allophycocyanin alpha subunit, Allophycocyanin beta 18 subunit, Allophycocyanin beta subunit, ... | | 著者 | Sui, S.F, Ma, J.F, You, X, Sun, S. | | 登録日 | 2019-07-12 | | 公開日 | 2019-12-11 | | 最終更新日 | 2020-03-18 | | 実験手法 | ELECTRON MICROSCOPY (2.8 Å) | | 主引用文献 | Structural basis of energy transfer in Porphyridium purpureum phycobilisome.
Nature, 579, 2020
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1JJ6
 | | Testing the Water-Mediated Hin Recombinase DNA Recognition by Systematic Mutations. | | 分子名称: | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5'-D(*AP*TP*CP*TP*TP*AP*TP*CP*AP*AP*AP*AP*AP*C)-3', 5'-D(*TP*GP*TP*(5IT)P*TP*TP*TP*GP*AP*TP*AP*AP*GP*A)-3', ... | | 著者 | Chiu, T.K, Sohn, C, Johnson, R.C, Dickerson, R.E. | | 登録日 | 2001-07-03 | | 公開日 | 2002-02-22 | | 最終更新日 | 2024-04-03 | | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | | 主引用文献 | Testing water-mediated DNA recognition by the Hin recombinase.
EMBO J., 21, 2002
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1IJ1
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1TNU
 | | Rat Protein Geranylgeranyltransferase Type-I Complexed with a GGPP analog and a GCINCCKVL Peptide Derived from RhoB | | 分子名称: | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-[METHYL-(5-GERANYL-4-METHYL-PENT-3-ENYL)-AMINO]-ETHYL-DIPHOSPHATE, CHLORIDE ION, ... | | 著者 | Reid, T.S, Terry, K.L, Casey, P.J, Beese, L.S. | | 登録日 | 2004-06-11 | | 公開日 | 2004-11-02 | | 最終更新日 | 2023-08-23 | | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | | 主引用文献 | Crystallographic analysis of CaaX prenyltransferases complexed with substrates defines rules of protein substrate selectivity.
J.Mol.Biol., 343, 2004
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2FK6
 | | Crystal Structure of RNAse Z/tRNA(Thr) complex | | 分子名称: | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, RIBONUCLEASE Z, ... | | 著者 | Li de la Sierra-Gallay, I, Mathy, N, Pellegrini, O, Condon, C. | | 登録日 | 2006-01-04 | | 公開日 | 2006-03-21 | | 最終更新日 | 2023-08-30 | | 実験手法 | X-RAY DIFFRACTION (2.9 Å) | | 主引用文献 | Structure of the ubiquitous 3' processing enzyme RNase Z bound to transfer RNA.
Nat.Struct.Mol.Biol., 13, 2006
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1TNO
 | | Rat Protein Geranylgeranyltransferase Type-I Complexed with a GGPP analog and a KKKSKTKCVIM Peptide Derived from K-Ras4B | | 分子名称: | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-[METHYL-(5-GERANYL-4-METHYL-PENT-3-ENYL)-AMINO]-ETHYL-DIPHOSPHATE, CHLORIDE ION, ... | | 著者 | Reid, T.S, Terry, K.L, Casey, P.J, Beese, L.S. | | 登録日 | 2004-06-11 | | 公開日 | 2004-11-02 | | 最終更新日 | 2023-08-23 | | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | | 主引用文献 | Crystallographic analysis of CaaX prenyltransferases complexed with substrates defines rules of protein substrate selectivity.
J.Mol.Biol., 343, 2004
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2F9U
 | | HCV NS3 protease domain with NS4a peptide and a ketoamide inhibitor with a P2 norborane | | 分子名称: | 1,1-DIMETHYLETHYL [1-CYCLOHEXYL-2-[3-[[[1-[2-[[2-[[2-(DIMETHYLAMINO)-2-OXO-1-PHENYLETHYL]AMINO]-2-OXOETHYL]AMINO]-1,2-DIOXOETHYL]PENTYL]AMINO]CARBONYL]-2-AZABICYCLO[2.2.1]HEPTAN-2-YL]-2-OXOETHYL]CARBAMATE, NS3 protease/helicase', ZINC ION, ... | | 著者 | Venkatraman, S, Njoroge, F.G, Wu, W, Girijavallabhan, V, Prongay, A.J, Butkiewicz, N, Pichardo, J. | | 登録日 | 2005-12-06 | | 公開日 | 2006-06-06 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | | 主引用文献 | Novel Inhibitors of Hepatitis C NS3-NS4A Serine Protease Derived from 2-Aza-bicyclo[2.2.1]heptane-3-carboxylic acid.
Bioorg.Med.Chem.Lett., 16, 2006
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6IBI
 | | Copper binding protein from Laetisaria arvalis (LaX325) | | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, Auxiliary activity CAZyme, COPPER (II) ION, ... | | 著者 | Frandsen, K.E.H, Tandrup, T, Labourel, A, Haon, M, Berrin, J.-G, Lo Leggio, L. | | 登録日 | 2018-11-30 | | 公開日 | 2019-11-13 | | 最終更新日 | 2020-07-29 | | 実験手法 | X-RAY DIFFRACTION (2.08 Å) | | 主引用文献 | A fungal family of lytic polysaccharide monooxygenase-like copper proteins.
Nat.Chem.Biol., 16, 2020
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