PDB: 41522 件ウェブページステータス検索Chemie searchBIRD

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1UXN	Structural basis for allosteric regulation and substrate specificity of the non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (GAPN) from Thermoproteus tenax 分子名称: ADENOSINE MONOPHOSPHATE, GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE (NADP+), NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ... 著者 Lorentzen, E, Hensel, R, Pohl, E. 登録日 2004-02-27 公開日 2004-08-05 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural Basis of Allosteric Regulation and Substrate Specificity of the Non-Phosphorylating Glyceraldehyde 3-Phosphate Dehydrogenase from Thermoproteus Tenax J.Mol.Biol., 341, 2004
1ZPD	PYRUVATE DECARBOXYLASE FROM ZYMOMONAS MOBILIS 分子名称: CITRIC ACID, MAGNESIUM ION, MONO-{4-[(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-AMINO]-2-HYDROXY-3-MERCAPTO-PENT-3-ENYL-PHOSPHONO} ESTER, ... 著者 Lu, G, Dobritzsch, D, Schneider, G. 登録日 1998-04-17 公開日 1999-02-02 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 High resolution crystal structure of pyruvate decarboxylase from Zymomonas mobilis. Implications for substrate activation in pyruvate decarboxylases. J.Biol.Chem., 273, 1998
3Q9I	LVFFA segment from Alzheimer's Amyloid-Beta displayed on 42-membered macrocycle scaffold, bromide derivative 分子名称: CHLORIDE ION, Cyclic pseudo-peptide LV(4BF)FA(ORN)(HAO)LK(ORN), GLYCEROL, ... 著者 Liu, C, Sawaya, M.R, Eisenberg, D, Nowick, J.S, Cheng, P, Zheng, J. 登録日 2011-01-07 公開日 2011-06-08 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.99 Å) 主引用文献 Characteristics of Amyloid-Related Oligomers Revealed by Crystal Structures of Macrocyclic beta-Sheet Mimics. J.Am.Chem.Soc., 133, 2011
3P4P	Crystal structure of Menaquinol:fumarate oxidoreductase in complex with fumarate 分子名称: FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, ... 著者 Tomasiak, T.M, Archuleta, T.L, Andr ll, J, Luna-Ch vez, C, Davis, T.A, Sarwar, M, Ham, A.J, McDonald, W.H, Yankowskaya, V, Stern, H.A, Johnston, J.N, Maklashina, E, Cecchini, G, Iverson, T.M. 登録日 2010-10-06 公開日 2010-12-01 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Geometric restraint drives on- and off-pathway catalysis by the Escherichia coli menaquinol:fumarate reductase. J.Biol.Chem., 286, 2011
3PG0	Crystal structure of designed 3-fold symmetric protein, ThreeFoil 分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, SODIUM ION, ... 著者 Lobsanov, Y.D, Broom, A, Howell, P.L, Rose, D.R, Meiering, E.M. 登録日 2010-10-29 公開日 2011-12-21 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.62 Å) 主引用文献 Modular evolution and the origins of symmetry: reconstruction of a three-fold symmetric globular protein. Structure, 20, 2012
3H7R	Crystal structure of the plant stress-response enzyme AKR4C8 分子名称: 1,2-ETHANEDIOL, ACETATE ION, Aldo-keto reductase, ... 著者 White, S.A, Simpson, P.J, Ride, J.P. 登録日 2009-04-28 公開日 2009-08-04 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Characterization of two novel aldo-keto reductases from Arabidopsis: expression patterns, broad substrate specificity, and an open active-site structure suggest a role in toxicant metabolism following stress. J.Mol.Biol., 392, 2009
1JK4	DES 1-6 BOVINE NEUROPHYSIN II COMPLEX WITH VASOPRESSIN 分子名称: CADMIUM ION, Lys Vasopressin, NEUROPHYSIN 2 著者 Rose, J.P, Wang, B.-C. 登録日 2001-07-11 公開日 2003-02-04 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structures of an Unliganded Neurophysin and its Vasopressin Complex: Implications for Binding and Allosteric Mechanisms Protein Sci., 10, 2001
3Q9H	LVFFA segment from Alzheimer's Amyloid-Beta displayed on 42-membered macrocycle scaffold 分子名称: 1,4-BUTANEDIOL, Cyclic pseudo-peptide LVFFA(ORN)(HAO)LK(ORN), GLYCEROL, ... 著者 Liu, C, Sawaya, M.R, Eisenberg, D, Nowick, J.S, Cheng, P, Zheng, J. 登録日 2011-01-07 公開日 2011-06-08 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Characteristics of Amyloid-Related Oligomers Revealed by Crystal Structures of Macrocyclic beta-Sheet Mimics. J.Am.Chem.Soc., 133, 2011
2JSC	NMR structure of the cadmium metal-sensor CMTR from Mycobacterium tuberculosis 分子名称: CADMIUM ION, Transcriptional regulator Rv1994c/MT2050 著者 Banci, L, Bertini, I, Cantini, F, Ciofi-Baffoni, S, Cavet, J.S, Dennison, C, Graham, A.I, Harvie, D.R, Robinson, N.J, Structural Proteomics in Europe (SPINE) 登録日 2007-07-02 公開日 2007-07-31 最終更新日 2023-12-20 実験手法 SOLUTION NMR 主引用文献 NMR Structural Analysis of Cadmium Sensing by Winged Helix Repressor CmtR. J.Biol.Chem., 282, 2007
1EHX	NMR SOLUTION STRUCTURE OF THE LAST UNKNOWN MODULE OF THE CELLULOSOMAL SCAFFOLDIN PROTEIN CIPC OF CLOSTRIDUM CELLULOLYTICUM 分子名称: SCAFFOLDIN PROTEIN 著者 Mosbah, A, Belaich, A, Bornet, O, Belaich, J.P, Henrissat, B, Darbon, H. 登録日 2000-02-23 公開日 2000-11-17 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution structure of the module X2 1 of unknown function of the cellulosomal scaffolding protein CipC of Clostridium cellulolyticum. J.Mol.Biol., 304, 2000
2FUK	Crystal structure of XC6422 from Xanthomonas campestris: a member of a/b serine hydrolase without lid at 1.6 resolution 分子名称: XC6422 protein 著者 Yang, C.Y, Chin, K.H, Chou, C.C, Wang, A.H.J, Chou, S.H. 登録日 2006-01-27 公開日 2006-07-04 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structure of XC6422 from Xanthomonas campestris at 1.6 A resolution: a small serine alpha/beta-hydrolase Acta Crystallogr.,Sect.F, 62, 2006
1S74	SOLUTION STRUCTURE OF A DNA DUPLEX CONTAINING AN ALPHA-ANOMERIC ADENOSINE: INSIGHTS INTO SUBSTRATE RECOGNITION BY ENDONUCLEASE IV 分子名称: 5'-D(*CP*GP*TP*CP*GP*TP*GP*GP*AP*C)-3', 5'-D(*GP*TP*CP*CP*(A3A)P*CP*GP*AP*CP*G)-3' 著者 Aramini, J.M, Cleaver, S.H, Pon, R.T, Cunningham, R.P, Germann, M.W. 登録日 2004-01-28 公開日 2004-04-20 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution Structure of a DNA Duplex Containing an alpha-Anomeric Adenosine: Insights into Substrate Recognition by Endonuclease IV. J.Mol.Biol., 338, 2004
3E6V	X-ray structure of human arginase I-D183N mutant: the complex with ABH 分子名称: 2(S)-AMINO-6-BORONOHEXANOIC ACID, Arginase-1, MANGANESE (II) ION 著者 Di Costanzo, L, Christianson, D.W. 登録日 2008-08-16 公開日 2008-12-02 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.72 Å) 主引用文献 Probing the specificity determinants of amino acid recognition by arginase. Biochemistry, 48, 2009
2YGG	Complex of CaMBR and CaM 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, ... 著者 Koester, S, Yildiz, O. 登録日 2011-04-15 公開日 2011-09-28 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.227 Å) 主引用文献 Structure of Human Na+/H+ Exchanger Nhe1 Regulatory Region in Complex with Cam and Ca2+ J.Biol.Chem., 286, 2011
3REA	HIV-1 Nef protein in complex with engineered Hck-SH3 domain 分子名称: Protein Nef, Tyrosine-protein kinase HCK 著者 Schulte, A, Blankenfeldt, W, Geyer, M. 登録日 2011-04-04 公開日 2011-06-01 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Molecular design, functional characterization and structural basis of a protein inhibitor against the HIV-1 pathogenicity factor Nef. PLoS ONE, 6, 2011
5AWN	Crystal structure of Human anti-HIV-1 broadly neutralizing antibody 3BC176 Fab 分子名称: Heavy chain of 3BC176 Fab, Light chain of 3BC176 Fab 著者 Lee, J.H, Wilson, I.A, Ward, A.B. 登録日 2015-07-06 公開日 2015-11-11 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.887 Å) 主引用文献 Antibodies to a conformational epitope on gp41 neutralize HIV-1 by destabilizing the Env spike. Nat Commun, 6, 2015
3EOU	tRNA-guanine transglycosylase in complex with 6-amino-4-(2-hydroxyethyl)-2-(methylamino)-3,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one 分子名称: 6-amino-4-(2-hydroxyethyl)-2-(methylamino)-3,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one, GLYCEROL, Queuine tRNA-ribosyltransferase, ... 著者 Ritschel, T, Heine, A, Klebe, G. 登録日 2008-09-29 公開日 2009-09-15 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.93 Å) 主引用文献 How to Replace the Residual Solvation Shell of Polar Active Site Residues to Achieve Nanomolar Inhibition of tRNA-Guanine Transglycosylase Chemmedchem, 4, 2009
4E53	Calmodulin and Nm peptide complex 分子名称: Calmodulin, Linker, IQ motif of Neuromodulin 著者 Kumar, V, Sivaraman, J. 登録日 2012-03-13 公開日 2013-03-20 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.69 Å) 主引用文献 Structural basis for the interaction of unstructured neuron specific substrates neuromodulin and neurogranin with calmodulin Sci Rep, 3, 2013
2DBG	Solution structure of the Pyrin (PAAD-DAPIN) domain in human Myeloid cell nuclear differentiation antigen 分子名称: Myeloid cell nuclear differentiation antigen 著者 Saito, K, Inoue, M, Koshiba, S, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2005-12-15 公開日 2006-06-15 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Solution structure of the Pyrin (PAAD-DAPIN) domain in human Myeloid cell nuclear differentiation antigen To be Published
3SZT	Quorum Sensing Control Repressor, QscR, Bound to N-3-oxo-dodecanoyl-L-Homoserine Lactone 分子名称: N-3-OXO-DODECANOYL-L-HOMOSERINE LACTONE, Quorum-sensing control repressor, SODIUM ION 著者 Churchill, M.E.A, Lintz, M.J. 登録日 2011-07-19 公開日 2011-09-28 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 Crystal structure of QscR, a Pseudomonas aeruginosa quorum sensing signal receptor. Proc.Natl.Acad.Sci.USA, 108, 2011
1S0T	Solution structure of a DNA duplex containing an alpha-anomeric adenosine: insights into substrate recognition by endonuclease IV 分子名称: 5'-D(*Cp*Gp*Tp*Cp*Gp*Tp*Gp*Gp*Ap*C)-3', 5'-D(*Gp*Tp*Cp*Cp*(A3A)p*Cp*Gp*Ap*Cp*G)-3' 著者 Aramini, J.M, Cleaver, S.H, Pon, R.T, Cunningham, R.P, Germann, M.W. 登録日 2004-01-04 公開日 2004-04-20 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution Structure of a DNA Duplex Containing an alpha-Anomeric Adenosine: Insights into Substrate Recognition by Endonuclease IV. J.Mol.Biol., 338, 2004
3EOS	tRNA-guanine transglycosylase in complex with 6-amino-4-{2-[(cyclohexylmethyl)amino]ethyl}-2-(methylamino)-1,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one 分子名称: 6-amino-4-{2-[(cyclohexylmethyl)amino]ethyl}-2-(methylamino)-1,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one, GLYCEROL, Queuine tRNA-ribosyltransferase, ... 著者 Ritschel, T, Heine, A, Klebe, G. 登録日 2008-09-29 公開日 2009-09-15 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.78 Å) 主引用文献 How to Replace the Residual Solvation Shell of Polar Active Site Residues to Achieve Nanomolar Inhibition of tRNA-Guanine Transglycosylase Chemmedchem, 4, 2009
4E8O	Crystal structure of aminoglycoside antibiotic 6'-N-acetyltransferase AAC(6')-Ih from Acinetobacter baumannii 分子名称: Aac(6')-Ih protein, CHLORIDE ION 著者 Stogios, P.J, Minasov, G, Dong, A, Evdokimova, E, Yim, V, Courvalin, P, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2012-03-20 公開日 2012-04-04 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.138 Å) 主引用文献 Structural and Biochemical Characterization of Acinetobacter spp. Aminoglycoside Acetyltransferases Highlights Functional and Evolutionary Variation among Antibiotic Resistance Enzymes. ACS Infect Dis., 3, 2017
1WTM	X-ray structure of HEW Lysozyme Orthorhombic Crystal formed in the Earth's magnetic field 分子名称: CHLORIDE ION, Lysozyme C 著者 Saijo, S, Yamada, Y, Sato, T, Tanaka, N, Matsui, T, Sazaki, G, Nakajima, K, Matsuura, Y. 登録日 2004-11-25 公開日 2004-12-14 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.33 Å) 主引用文献 Structural consequences of hen egg-white lysozyme orthorhombic crystal growth in a high magnetic field: validation of X-ray diffraction intensity, conformational energy searching and quantitative analysis of B factors and mosaicity. Acta Crystallogr.,Sect.D, 61, 2005
1WKM	THE PRODUCT BOUND FORM OF THE MN(II)LOADED METHIONINE AMINOPEPTIDASE FROM HYPERTHERMOPHILE PYROCOCCUS FURIOSUS 分子名称: MANGANESE (II) ION, METHIONINE, Methionine aminopeptidase 著者 Copik, A.J, Nocek, B.P, Jang, S.B, Swierczek, S.I, Ruebush, S, Meng, L, D'souza, V.M, Peters, J.W, Bennett, B, Holz, R.C. 登録日 2004-06-01 公開日 2005-02-22 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 EPR and X-ray crystallographic characterization of the product-bound form of the MnII-loaded methionyl aminopeptidase from Pyrococcus furiosus Biochemistry, 44, 2005

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