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4MW5
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Trypanosoma brucei methionyl-tRNA synthetase in complex with inhibitor 1-{3-[(3-chloro-5-methoxybenzyl)amino]propyl}-3-phenylurea (Chem 1415)
分子名称: 1-{3-[(3-chloro-5-methoxybenzyl)amino]propyl}-3-phenylurea, DIMETHYL SULFOXIDE, GLYCEROL, ...
著者Koh, C.Y, Kim, J.E, Wetzel, A.B, de van der Schueren, W.J, Shibata, S, Liu, J, Zhang, Z, Fan, E, Verlinde, C.L.M.J, Hol, W.G.J.
登録日2013-09-24
公開日2014-04-30
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.347 Å)
主引用文献Structures of Trypanosoma brucei Methionyl-tRNA Synthetase with Urea-Based Inhibitors Provide Guidance for Drug Design against Sleeping Sickness.
Plos Negl Trop Dis, 8, 2014
3T3Q
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Human Cytochrome P450 2A6 I208S/I300F/G301A/S369G in complex with Pilocarpine
分子名称: (3S,4R)-3-ethyl-4-[(1-methyl-1H-imidazol-5-yl)methyl]dihydrofuran-2(3H)-one, Cytochrome P450 2A6, PROTOPORPHYRIN IX CONTAINING FE
著者DeVore, N.M, Scott, E.E.
登録日2011-07-25
公開日2011-12-07
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural comparison of cytochromes P450 2A6, 2A13, and 2E1 with pilocarpine.
Febs J., 279, 2012
3SQ7
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Crystal Structure Analysis of the Yeast Tyrosyl-DNA Phosphodiesterase H432N_Glu Mutant
分子名称: SULFATE ION, Tyrosyl-DNA phosphodiesterase 1
著者Gajewski, S, White, S.W.
登録日2011-07-05
公開日2011-12-28
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Analysis of the active-site mechanism of tyrosyl-DNA phosphodiesterase I: a member of the phospholipase D superfamily.
J.Mol.Biol., 415, 2012
5WXZ
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BU of 5wxz by Molmil
Crystal structure of Microcystis aeruginosa PCC 7806 aspartate racemase in complex with D-aspartate
分子名称: D-ASPARTIC ACID, McyF
著者Cao, D.D, Zhou, K, Jiang, Y.L, Zhou, C.Z.
登録日2017-01-09
公開日2018-01-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural insights into the catalysis and substrate specificity of cyanobacterial aspartate racemase McyF.
Biochem.Biophys.Res.Commun., 514, 2019
4OUR
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BU of 4our by Molmil
Crystal structure of Arabidopsis thaliana phytochrome B photosensory module
分子名称: 3-[5-[[(3~{R},4~{R})-3-ethyl-4-methyl-5-oxidanylidene-3,4-dihydropyrrol-2-yl]methyl]-2-[[5-[(4-ethyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{H}-pyrrol-2-yl]methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid, GLYCEROL, Phytochrome B, ...
著者Sethe Burgie, E, Bussell, A.N, Walker, J.M, Dubiel, K, Vierstra, R.D.
登録日2014-02-18
公開日2014-07-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Crystal structure of the photosensing module from a red/far-red light-absorbing plant phytochrome.
Proc.Natl.Acad.Sci.USA, 111, 2014
4OFY
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Crystal Structure of the Complex of SYG-1 D1-D2 and SYG-2 D1-D4
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ETHYL MERCURY ION, ...
著者Ozkan, E, Garcia, K.C.
登録日2014-01-15
公開日2014-02-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Extracellular Architecture of the SYG-1/SYG-2 Adhesion Complex Instructs Synaptogenesis.
Cell(Cambridge,Mass.), 156, 2014
6JXS
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Crystal Structure of Indigo reductase (Y151F) from Bacillus smithii type strain DSM 4216
分子名称: 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, FLAVIN MONONUCLEOTIDE, FMN-dependent NADH-azoreductase
著者Yoneda, K, Sakuraba, H, Ohshima, T.
登録日2019-04-24
公開日2020-04-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural and biochemical characterization of an extremely thermostable FMN-dependent NADH-indigo reductase from Bacillus smithii.
Int.J.Biol.Macromol., 164, 2020
3U7I
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BU of 3u7i by Molmil
The crystal structure of FMN-dependent NADH-azoreductase 1 (GBAA0966) from Bacillus anthracis str. Ames Ancestor
分子名称: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, FMN-dependent NADH-azoreductase 1, ...
著者Zhang, R, Gu, M, Tan, K, Kwon, K, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2011-10-13
公開日2011-11-09
最終更新日2015-12-16
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The crystal structure of FMN-dependent NADH-azoreductase 1 (GBAA0966) from Bacillus anthracis str. Ames Ancestor
To be Published
4OF0
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BU of 4of0 by Molmil
Crystal Structure of SYG-1 D1-D2, refolded
分子名称: Protein SYG-1, isoform b
著者Ozkan, E, Garcia, K.C.
登録日2014-01-14
公開日2014-02-19
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Extracellular Architecture of the SYG-1/SYG-2 Adhesion Complex Instructs Synaptogenesis.
Cell(Cambridge,Mass.), 156, 2014
4OFK
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Crystal Structure of SYG-2 D4
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
著者Ozkan, E, Borek, D, Otwinowski, Z, Garcia, K.C.
登録日2014-01-15
公開日2014-02-19
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.802 Å)
主引用文献Extracellular Architecture of the SYG-1/SYG-2 Adhesion Complex Instructs Synaptogenesis.
Cell(Cambridge,Mass.), 156, 2014
6KYY
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BU of 6kyy by Molmil
Cu(II) complex of HOCl-induced flavoprotein disulfide reductase RclA from Escherichia coli
分子名称: CHLORIDE ION, COPPER (II) ION, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Baek, Y, Ha, N.-C.
登録日2019-09-20
公開日2020-02-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure and function of the hypochlorous acid-induced flavoprotein RclA fromEscherichia coli.
J.Biol.Chem., 295, 2020
6L7O
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BU of 6l7o by Molmil
cryo-EM structure of cyanobacteria Fd-NDH-1L complex
分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, BETA-CAROTENE, ...
著者Zhang, C, Shuai, J, Wu, J, Lei, M.
登録日2019-11-02
公開日2020-02-19
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural insights into NDH-1 mediated cyclic electron transfer.
Nat Commun, 11, 2020
3TBG
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BU of 3tbg by Molmil
Human cytochrome P450 2D6 with two thioridazines bound in active site
分子名称: 10-{2-[(2R)-1-methylpiperidin-2-yl]ethyl}-2-(methylsulfanyl)-10H-phenothiazine, Cytochrome P450 2D6, GLYCEROL, ...
著者Wang, A, Stout, C.D, Johnson, E.F.
登録日2011-08-05
公開日2012-08-08
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Contributions of Ionic Interactions and Protein Dynamics to Cytochrome P450 2D6 (CYP2D6) Substrate and Inhibitor Binding.
J.Biol.Chem., 290, 2015
4OFI
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BU of 4ofi by Molmil
Crystal Structure of Duf (Kirre) D1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Kin of irre, isoform A, ...
著者Ozkan, E, Garcia, K.C.
登録日2014-01-14
公開日2014-02-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Extracellular Architecture of the SYG-1/SYG-2 Adhesion Complex Instructs Synaptogenesis.
Cell(Cambridge,Mass.), 156, 2014
5TBI
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Crystal structure of mouse CARM1 in complex with inhibitor LH1427
分子名称: 1,2-ETHANEDIOL, 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, 4-[2-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methylamino]ethylamino]-1-(methoxymethyl)pyrimidin-2-one, ...
著者Cura, V, Marechal, N, Troffer-Charlier, N, Halby, L, Arimondo, P, Bonnefond, L, Cavarelli, J.
登録日2016-09-12
公開日2017-09-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.294 Å)
主引用文献Hijacking DNA methyltransferase transition state analogues to produce chemical scaffolds for PRMT inhibitors.
Philos.Trans.R.Soc.Lond.B Biol.Sci., 373, 2018
4OXP
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X-ray crystal structure of the S1 and 5'-sensor domains of RNase E from Caulobacter crescentus
分子名称: Ribonuclease E
著者Voss, J.E, Luisi, B.F.L, Hardwick, S.W.
登録日2014-02-06
公開日2014-12-03
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Molecular recognition of RhlB and RNase D in the Caulobacter crescentus RNA degradosome.
Nucleic Acids Res., 42, 2014
4MVY
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BU of 4mvy by Molmil
Trypanosoma brucei methionyl-tRNA synthetase in complex with inhibitor 1-{3-[(3,5-dichlorobenzyl)amino]propyl}-3-(3-hydroxyphenyl)urea (Chem 1387)
分子名称: 1-{3-[(3,5-dichlorobenzyl)amino]propyl}-3-(3-hydroxyphenyl)urea, DIMETHYL SULFOXIDE, GLYCEROL, ...
著者Koh, C.Y, Kim, J.E, Wetzel, A.B, de van der Schueren, W.J, Shibata, S, Liu, J, Zhang, Z, Fan, E, Verlinde, C.L.M.J, Hol, W.G.J.
登録日2013-09-24
公開日2014-04-30
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.314 Å)
主引用文献Structures of Trypanosoma brucei Methionyl-tRNA Synthetase with Urea-Based Inhibitors Provide Guidance for Drug Design against Sleeping Sickness.
Plos Negl Trop Dis, 8, 2014
4MW1
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Trypanosoma brucei methionyl-tRNA synthetase in complex with inhibitor 1-{3-[(3-chloro-5-methoxybenzyl)amino]propyl}-3-thiophen-3-ylurea (Chem 1444)
分子名称: 1-{3-[(3-chloro-5-methoxybenzyl)amino]propyl}-3-thiophen-3-ylurea, DIMETHYL SULFOXIDE, GLYCEROL, ...
著者Koh, C.Y, Kim, J.E, Wetzel, A.B, de van der Schueren, W.J, Shibata, S, Liu, J, Zhang, Z, Fan, E, Verlinde, C.L.M.J, Hol, W.G.J.
登録日2013-09-24
公開日2014-04-30
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.494 Å)
主引用文献Structures of Trypanosoma brucei Methionyl-tRNA Synthetase with Urea-Based Inhibitors Provide Guidance for Drug Design against Sleeping Sickness.
Plos Negl Trop Dis, 8, 2014
6ABI
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BU of 6abi by Molmil
The apo-structure of D-lactate dehydrogenase from Fusobacterium nucleatum
分子名称: D-lactate dehydrogenase, GLYCEROL, SULFATE ION
著者Furukawa, N, Miyanaga, A, Nakajima, M, Taguchi, H.
登録日2018-07-21
公開日2018-09-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Basis of Sequential Allosteric Transitions in Tetrameric d-Lactate Dehydrogenases from Three Gram-Negative Bacteria
Biochemistry, 57, 2018
3UAS
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Cytochrome P450 2B4 covalently bound to the mechanism-based inactivator 9-ethynylphenanthrene
分子名称: 5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE, Cytochrome P450 2B4, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Gay, S.C, Zhang, H, Shah, M.B, Stout, C.D, Halpert, J.R, Hollenberg, P.F.
登録日2011-10-21
公開日2013-01-09
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.939 Å)
主引用文献Potent Mechanism-Based Inactivation of Cytochrome P450 2B4 by 9-Ethynylphenanthrene: Implications for Allosteric Modulation of Cytochrome P450 Catalysis.
Biochemistry, 52, 2013
6I1P
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Respiratory complex I from Thermus thermophilus with bound NADH
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ...
著者Gutierrez-Fernandez, J, Minhas, G.S, Sazanov, L.A.
登録日2018-10-29
公開日2020-09-02
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.207 Å)
主引用文献Key role of quinone in the mechanism of respiratory complex I.
Nat Commun, 11, 2020
6A7A
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BU of 6a7a by Molmil
AKR1C1 complexed with new inhibitor with novel scaffold
分子名称: (4R)-6-amino-4-(4-hydroxy-3-methoxy-5-nitrophenyl)-3-propyl-1,4-dihydropyrano[2,3-c]pyrazole-5-carbonitrile, Aldo-keto reductase family 1 member C1, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Zheng, X, Zhao, Y, Zhang, H, Chen, Y.
登録日2018-07-02
公開日2019-07-03
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.37 Å)
主引用文献Screening, synthesis, crystal structure, and molecular basis of 6-amino-4-phenyl-1,4-dihydropyrano[2,3-c]pyrazole-5-carbonitriles as novel AKR1C3 inhibitors.
Bioorg.Med.Chem., 26, 2018
4OF6
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Crystal Structure of SYG-1 D1, Crystal form 1
分子名称: 1,2-ETHANEDIOL, Protein SYG-1, isoform b, ...
著者Ozkan, E, Garcia, K.C.
登録日2014-01-14
公開日2014-02-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.696 Å)
主引用文献Extracellular Architecture of the SYG-1/SYG-2 Adhesion Complex Instructs Synaptogenesis.
Cell(Cambridge,Mass.), 156, 2014
1PR9
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Human L-Xylulose Reductase Holoenzyme
分子名称: DIHYDROGENPHOSPHATE ION, L-XYLULOSE REDUCTASE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者El-Kabbani, O, Ishikura, S, Darmanin, C, Carbone, V, Chung, R.P.-T, Usami, N, Hara, A.
登録日2003-06-20
公開日2004-02-24
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Crystal structure of human L-xylulose reductase holoenzyme: probing the role of Asn107 with site-directed mutagenesis
Proteins, 55, 2004
5VOZ
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Yeast V-ATPase in complex with Legionella pneumophila effector SidK (rotational state 3)
分子名称: Uncharacterized protein, V-type proton ATPase catalytic subunit A,V-type proton ATPase catalytic subunit A, V-type proton ATPase subunit B, ...
著者Zhao, J.
登録日2017-05-03
公開日2017-06-28
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (7.6 Å)
主引用文献Molecular basis for the binding and modulation of V-ATPase by a bacterial effector protein.
PLoS Pathog., 13, 2017

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