PDB: 242 件ウェブページステータス検索Chemie searchBIRD

---

1XFO	Crystal Structure of an archaeal aminopeptidase 分子名称: Frv operon protein FrvX, ZINC ION 著者 Russo, S, Baumann, U. 登録日 2004-09-15 公開日 2004-10-05 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.96 Å) 主引用文献 Crystal structure of a dodecameric tetrahedral shaped aminopeptidase J.Biol.Chem., 279, 2004
3FPC	Chimera of alcohol dehydrogenase by exchange of the cofactor binding domain res 153-294 of T. brockii ADH by E. histolytica ADH 分子名称: 1,2-ETHANEDIOL, CACODYLATE ION, IMIDAZOLE, ... 著者 Felix, F, Goihberg, E, Shimon, L, Burstein, Y. 登録日 2009-01-05 公開日 2010-01-19 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Biochemical and structural properties of chimeras constructed by exchange of cofactor-binding domains in alcohol dehydrogenases from thermophilic and mesophilic microorganisms Biochemistry, 49, 2010
25C8	CATALYTIC ANTIBODY 5C8, FAB-HAPTEN COMPLEX 分子名称: IGG 5C8, N-METHYL-N-(PARA-GLUTARAMIDOPHENYL-ETHYL)-PIPERIDINIUM ION 著者 Gruber, K, Wilson, I.A. 登録日 1998-03-18 公開日 1999-03-23 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural basis for antibody catalysis of a disfavored ring closure reaction. Biochemistry, 38, 1999
6U15	Human thymine DNA glycosylase N140A mutant bound to DNA with 2'-F-5-carboxyl-dC substrate analog 分子名称: DNA (28-MER), G/T mismatch-specific thymine DNA glycosylase 著者 Pidugu, L.S, Pozharski, E, Drohat, A.C. 登録日 2019-08-15 公開日 2019-11-20 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Excision of 5-Carboxylcytosine by Thymine DNA Glycosylase. J.Am.Chem.Soc., 141, 2019
7OBZ	Structure of RsLOV D109G 分子名称: CHLORIDE ION, FLAVIN MONONUCLEOTIDE, LOV protein, ... 著者 Moeglich, A, Krafft, T.G.A, Weyand, M. 登録日 2021-04-25 公開日 2021-06-30 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 A Light-Oxygen-Voltage Receptor Integrates Light and Temperature. J.Mol.Biol., 433, 2021
7OB0	Structure of RsLOV d2 variant 分子名称: ACETATE ION, CALCIUM ION, FLAVIN MONONUCLEOTIDE, ... 著者 Moeglich, A, Krafft, T.G.A, Weyand, M. 登録日 2021-04-20 公開日 2021-06-30 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 A Light-Oxygen-Voltage Receptor Integrates Light and Temperature. J.Mol.Biol., 433, 2021
6U16	Human thymine DNA glycosylase N140A mutant bound to DNA with 5-carboxyl-dC substrate 分子名称: 1,2-ETHANEDIOL, DNA (28-MER), G/T mismatch-specific thymine DNA glycosylase 著者 Pidugu, L.S, Pozharski, E, Drohat, A.C. 登録日 2019-08-15 公開日 2019-11-20 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Excision of 5-Carboxylcytosine by Thymine DNA Glycosylase. J.Am.Chem.Soc., 141, 2019
3FSR	Chimera of alcohol dehydrogenase by exchange of the cofactor binding domain res 153-295 of T. brockii ADH by C. beijerinckii ADH 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, NADP-dependent alcohol dehydrogenase, ... 著者 Frolow, F, Greenblatt, H, Goihberg, E, Burstein, Y. 登録日 2009-01-11 公開日 2010-01-19 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Biochemical and structural properties of chimeras constructed by exchange of cofactor-binding domains in alcohol dehydrogenases from thermophilic and mesophilic microorganisms Biochemistry, 49, 2010
3FTN	Q165E/S254K Double Mutant Chimera of alcohol dehydrogenase by exchange of the cofactor binding domain res 153-295 of T. brockii ADH by C. beijerinckii ADH 分子名称: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ... 著者 Frolow, F, Goihberg, E, Shimon, L, Burstein, Y. 登録日 2009-01-13 公開日 2010-01-26 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.192 Å) 主引用文献 Biochemical and structural properties of chimeras constructed by exchange of cofactor-binding domains in alcohol dehydrogenases from thermophilic and mesophilic microorganisms. Biochemistry, 49, 2010
1NNP	X-ray structure of the GluR2 ligand-binding core (S1S2J) in complex with (S)-ATPA at 1.9 A resolution. Crystallization without zinc ions. 分子名称: 3-(5-TERT-BUTYL-3-OXIDOISOXAZOL-4-YL)-L-ALANINATE, Glutamate receptor 2, SULFATE ION 著者 Lunn, M.L, Hogner, A, Stensbol, T.B, Gouaux, E, Egebjerg, J, Kastrup, J.S. 登録日 2003-01-14 公開日 2003-03-11 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Three-Dimensional Structure of the Ligand-Binding Core of GluR2 in Complex with the Agonist (S)-ATPA: Implications for Receptor Subunit Selectivity. J.Med.Chem., 46, 2003
3PUQ	CEKDM7A from C.Elegans, complex with alpha-KG 分子名称: 2-OXOGLUTARIC ACID, FE (II) ION, GLYCEROL, ... 著者 Yang, Y, Wang, P, Xu, W, Xu, Y. 登録日 2010-12-06 公開日 2011-01-26 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Oncometabolite 2-hydroxyglutarate is a competitive inhibitor of alpha-ketoglutarate-dependent dioxygenases Cancer Cell, 19, 2011
1MZT	NMR structure of the fd bacteriophage pVIII coat protein in lipid bilayer membranes 分子名称: major coat protein pVIII 著者 Marassi, F.M, Opella, S.J. 登録日 2002-10-09 公開日 2002-11-27 最終更新日 2024-05-22 実験手法 SOLID-STATE NMR 主引用文献 Simultaneous assignment and structure determination of a membrane protein from NMR orientational restraints Protein Sci., 12, 2003
1NNK	X-ray structure of the GluR2 ligand-binding core (S1S2J) in complex with (S)-ATPA at 1.85 A resolution. Crystallization with zinc ions. 分子名称: 3-(5-TERT-BUTYL-3-OXIDOISOXAZOL-4-YL)-L-ALANINATE, CHLORIDE ION, Glutamate receptor 2, ... 著者 Lunn, M.-L, Hogner, A, Stensbol, T.B, Gouaux, E, Egebjerg, J, Kastrup, J.S. 登録日 2003-01-14 公開日 2003-03-04 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Three-Dimensional Structure of the Ligand-Binding Core of GluR2 in Complex with the Agonist (S)-ATPA: Implications for Receptor Subunit Selectivity. J.Med.Chem., 46, 2003
3PUR	CEKDM7A from C.Elegans, complex with D-2-HG 分子名称: (2R)-2-hydroxypentanedioic acid, FE (II) ION, Lysine-specific demethylase 7 homolog, ... 著者 Yang, Y, Wang, P, Xu, W, Xu, Y. 登録日 2010-12-06 公開日 2011-01-26 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Oncometabolite 2-hydroxyglutarate is a competitive inhibitor of alpha-ketoglutarate-dependent dioxygenases Cancer Cell, 19, 2011
3RGA	Crystal structure of epoxide hydrolase for polyether lasalocid A biosynthesis 分子名称: (4R,5S)-3-[(2R)-2-{(2S,2'R,4S,5S,5'R)-2,5'-diethyl-5'-[(1S)-1-hydroxyethyl]-4-methyloctahydro-2,2'-bifuran-5-yl}butanoyl]-4-methyl-5-phenyl-1,3-oxazolidin-2-one, (4R,5S)-3-[(2R,3S,4S)-2-ethyl-5-[(3R)-2-ethyl-3-[2-[(2R,3R)-2-ethyl-3-methyl-oxiran-2-yl]ethyl]oxiran-2-yl]-3-hydroxy-4-methyl-pentanoyl]-4-methyl-5-phenyl-1,3-oxazolidin-2-one, ACETATE ION, ... 著者 Hotta, K, Mathews, I.I, Chen, X, Kim, C.-Y. 登録日 2011-04-08 公開日 2012-03-07 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.59 Å) 主引用文献 Enzymatic catalysis of anti-Baldwin ring closure in polyether biosynthesis Nature, 483, 2012
8A3K	X-ray crystal structure of a de novo designed single-chain antiparallel 4-helix coiled-coil bundle, sc-apCC-4 分子名称: sc-apCC-4 著者 Albanese, K.I, Mylemans, B, Naudin, E.A, Woolfson, D.N. 登録日 2022-06-08 公開日 2022-10-05 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 From peptides to proteins: coiled-coil tetramers to single-chain 4-helix bundles. Chem Sci, 13, 2022
4Z47	Structure of the enzyme-product complex resulting from TDG action on a GU mismatch in the presence of excess base 分子名称: 1,2-ETHANEDIOL, ACETIC ACID, DNA, ... 著者 Pozharski, E, Malik, S.S, Drohat, A.C. 登録日 2015-04-01 公開日 2015-09-16 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Thymine DNA glycosylase exhibits negligible affinity for nucleobases that it removes from DNA. Nucleic Acids Res., 43, 2015
4Z7Z	Structure of the enzyme-product complex resulting from TDG action on a GT mismatch in the presence of excess base 分子名称: 1,2-ETHANEDIOL, ACETIC ACID, DNA (28-MER), ... 著者 Pozharski, E, Malik, S.S, Drohat, A.C. 登録日 2015-04-08 公開日 2015-09-16 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.83 Å) 主引用文献 Thymine DNA glycosylase exhibits negligible affinity for nucleobases that it removes from DNA. Nucleic Acids Res., 43, 2015
4Z7B	Structure of the enzyme-product complex resulting from TDG action on a GfC mismatch 分子名称: 1,2-ETHANEDIOL, ACETIC ACID, DNA (28-MER), ... 著者 Pozharski, E, Malik, S.S, Drohat, A.C. 登録日 2015-04-07 公開日 2015-09-16 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.02 Å) 主引用文献 Thymine DNA glycosylase exhibits negligible affinity for nucleobases that it removes from DNA. Nucleic Acids Res., 43, 2015
8ALQ	The Solution Structure of the Triple Mutant Methyl-CpG-Binding Domain from MeCP2 that Binds to Asymmetrically Modified DNA 分子名称: Methyl-CpG-binding protein 2 著者 Singh, H. 登録日 2022-08-01 公開日 2023-02-22 最終更新日 2023-07-19 実験手法 SOLUTION NMR 主引用文献 Epigenetic CpG duplex marks probed by an evolved DNA reader via a well-tempered conformational plasticity. Nucleic Acids Res., 51, 2023
8AJR	The Solution Structure of the Triple Mutant Methyl-CpG-Binding Domain from MeCP2 分子名称: Methyl-CpG-binding protein 2 著者 Singh, H. 登録日 2022-07-28 公開日 2023-02-22 最終更新日 2023-07-19 実験手法 SOLUTION NMR 主引用文献 Epigenetic CpG duplex marks probed by an evolved DNA reader via a well-tempered conformational plasticity. Nucleic Acids Res., 51, 2023
4Z3A	Acetate-free structure of the enzyme-product complex resulting from TDG action on a GU mismatch 分子名称: DNA (28-MER), G/T mismatch-specific thymine DNA glycosylase 著者 Pozharski, E, Malik, S.S, Drohat, A.C. 登録日 2015-03-31 公開日 2015-09-16 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.72 Å) 主引用文献 Thymine DNA glycosylase exhibits negligible affinity for nucleobases that it removes from DNA. Nucleic Acids Res., 43, 2015
4HK6	Crystal structure of Cordyceps militaris IDCase in complex with 5-nitro-uracil 分子名称: 5-nitrouracil, Uracil-5-carboxylate decarboxylase, ZINC ION 著者 Xu, S, Zhu, J, Ding, J. 登録日 2012-10-15 公開日 2013-09-11 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structures of isoorotate decarboxylases reveal a novel catalytic mechanism of 5-carboxyl-uracil decarboxylation and shed light on the search for DNA decarboxylase. Cell Res., 23, 2013
4HP3	Crystal structure of Tet3 in complex with a CpG dsDNA 分子名称: DNA (5'-D(*GP*CP*CP*AP*AP*CP*GP*TP*TP*GP*GP*C)-3'), LOC100036628 protein, UNKNOWN ATOM OR ION, ... 著者 Chao, X, Tempel, W, Bian, C, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC) 登録日 2012-10-23 公開日 2012-12-05 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Tet3 CXXC Domain and Dioxygenase Activity Cooperatively Regulate Key Genes for Xenopus Eye and Neural Development. Cell(Cambridge,Mass.), 151, 2012
4HK7	Crystal structure of Cordyceps militaris IDCase in complex with uracil 分子名称: URACIL, Uracil-5-carboxylate decarboxylase, ZINC ION 著者 Xu, S, Zhu, J, Ding, J. 登録日 2012-10-15 公開日 2013-09-11 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.189 Å) 主引用文献 Crystal structures of isoorotate decarboxylases reveal a novel catalytic mechanism of 5-carboxyl-uracil decarboxylation and shed light on the search for DNA decarboxylase. Cell Res., 23, 2013

<12345678910>