PDB: 66507 件ウェブページステータス検索Chemie searchBIRD

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5KV7	Human cyclophilin A at 278K, Data set 9 分子名称: Peptidyl-prolyl cis-trans isomerase A 著者 Russi, S, Gonzalez, A, Kenner, L.R, Keedy, D.A, Fraser, J.S, van den Bedem, H. 登録日 2016-07-13 公開日 2016-08-31 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Conformational variation of proteins at room temperature is not dominated by radiation damage. J Synchrotron Radiat, 24, 2017
3D7S	Crystal structure of Wild-Type E. Coli Asparate Transcarbamoylase at pH 8.5 at 2.80 A Resolution 分子名称: Aspartate carbamoyltransferase catalytic chain, Aspartate carbamoyltransferase regulatory chain, ZINC ION 著者 Stieglitz, K.A, Xia, J, Kantrowitz, E.R. 登録日 2008-05-21 公開日 2008-07-29 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 The first high pH structure of Escherichia coli aspartate transcarbamoylase. Proteins, 74, 2008
3CEP	Structure of a tryptophan synthase quinonoid intermediate 分子名称: 3-hydroxy-2-iminopropanoic acid, CESIUM ION, INDOLINE, ... 著者 Barends, T.R.M, Domratcheva, T, Kulik, V, Blumenstein, L, Dunn, M.F, Schlichting, I. 登録日 2008-02-29 公開日 2008-04-01 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structure and mechanistic implications of a tryptophan synthase quinonoid intermediate. Chembiochem, 9, 2008
6EGV	Sacbrood virus of honeybee 分子名称: minor capsid protein MiCP, structural protein VP1, structural protein VP2, ... 著者 Plevka, P, Prochazkova, M. 登録日 2017-09-12 公開日 2018-07-18 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.18 Å) 主引用文献 Virion structure and genome delivery mechanism of sacbrood honeybee virus. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
4P5O	Structure of an RBX1-UBC12~NEDD8-CUL1-DCN1 complex: a RING-E3-E2~ubiquitin-like protein-substrate intermediate trapped in action 分子名称: Cullin-1, DCN1-like protein 1, E3 ubiquitin-protein ligase RBX1, ... 著者 Scott, D.C, Schulman, B.A. 登録日 2014-03-18 公開日 2014-07-02 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (3.1071 Å) 主引用文献 Structure of a RING E3 Trapped in Action Reveals Ligation Mechanism for the Ubiquitin-like Protein NEDD8. Cell, 157, 2014
5KKN	Crystal structure of human ACC2 BC domain in complex with ND-646, the primary amide of ND-630 分子名称: 2-[1-[(2~{R})-2-(2-methoxyphenyl)-2-(oxan-4-yloxy)ethyl]-5-methyl-6-(1,3-oxazol-2-yl)-2,4-bis(oxidanylidene)thieno[2,3-d]pyrimidin-3-yl]-2-methyl-propanamide, Acetyl-CoA carboxylase 2 著者 Wang, R, Paul, D, Tong, L. 登録日 2016-06-22 公開日 2016-07-13 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Acetyl-CoA carboxylase inhibition by ND-630 reduces hepatic steatosis, improves insulin sensitivity, and modulates dyslipidemia in rats. Proc.Natl.Acad.Sci.USA, 113, 2016
7SEI	Glucose-6-phosphate 1-dehydrogenase (K403Q) 分子名称: Glucose-6-phosphate 1-dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE 著者 Mathews, I.I, Garcia, A.A, Wakatsuki, S, Mochly-Rosen, D. 登録日 2021-09-30 公開日 2022-08-17 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (3.65 Å) 主引用文献 Stabilization of glucose-6-phosphate dehydrogenase oligomers enhances catalytic activity and stability of clinical variants. J.Biol.Chem., 298, 2022
6EHF	OmpT (in-vitro folded), an outer membrane protein Vibrio cholerae (trimer form) 分子名称: CALCIUM ION, OmpT protein 著者 van den berg, B, Pathania, M. 登録日 2017-09-13 公開日 2018-04-25 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.72 Å) 主引用文献 Unusual Constriction Zones in the Major Porins OmpU and OmpT from Vibrio cholerae. Structure, 26, 2018
6IJ4	Crystal structure of PETase S121E, D186H mutant from Ideonella sakaiensis 分子名称: Poly(ethylene terephthalate) hydrolase 著者 Joo, S, Kim, K.J. 登録日 2018-10-08 公開日 2019-09-04 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Rational Protein Engineering of Thermo-Stable PETase from Ideonella sakaiensis for Highly Efficient PET Degradation Acs Catalysis, 9, 2019
1EAN	THE RUNX1 Runt domain at 1.70A resolution: A structural switch and specifically bound chloride ions modulate DNA binding 分子名称: CHLORIDE ION, RUNT-RELATED TRANSCRIPTION FACTOR 1 著者 Backstrom, S, Wolf-Watz, M, Grundstrom, C, Hard, T, Grundstrom, T, Sauer, U.H. 登録日 2001-07-13 公開日 2002-09-12 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 The Runx1 Runt Domain at 1.25 A Resolution: A Structural Switch and Specifically Bound Chloride Ions Modulate DNA Binding J.Mol.Biol., 322, 2002
6IG7	Crystal structure of thermolysin delivered in polyacrylamide using x-ray free electron laser 分子名称: CALCIUM ION, LEUCINE, LYSINE, ... 著者 Nam, K.H. 登録日 2018-09-25 公開日 2018-11-07 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Polyacrylamide injection matrix for serial femtosecond crystallography. Sci Rep, 9, 2019
1EUO	Crystal structure of nitrophorin 2 (prolixin-S) 分子名称: AMMONIA, NITROPHORIN 2, PROTOPORPHYRIN IX CONTAINING FE 著者 Andersen, J.F, Montfort, W.R. 登録日 2000-04-17 公開日 2000-05-10 最終更新日 2018-04-18 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 The crystal structure of nitrophorin 2. A trifunctional antihemostatic protein from the saliva of Rhodnius prolixus J.Biol.Chem., 275, 2000
6EJQ	Crystal structure of a C-terminally truncated small terminase protein from the thermophilic bacteriophage G20c 分子名称: Terminase small subunit 著者 Xu, R.G, Loredo-Varela, J, Jenkins, H.T, Antson, A.A. 登録日 2017-09-22 公開日 2018-10-10 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of a C-terminally truncated small terminase protein from the thermophilic bacteriophage G20c To Be Published
8SUT	Crystal structure of YisK from Bacillus subtilis in complex with reaction product 4-Hydroxy-2-oxoglutaric acid 分子名称: (2~{R})-2-oxidanyl-4-oxidanylidene-pentanedioic acid, Fumarylacetoacetate hydrolase family protein, MANGANESE (II) ION 著者 Krieger, I.V, Chemelewski, V, Guo, T, Sperber, A, Herman, J, Sacchettini, J.C. 登録日 2023-05-13 公開日 2023-11-01 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.93 Å) 主引用文献 Bacillus subtilis YisK possesses oxaloacetate decarboxylase activity and exhibits Mbl-dependent localization. J.Bacteriol., 206, 2024
8SUU	Crystal structure of YisK from Bacillus subtilis in apo form 分子名称: Fumarylacetoacetate hydrolase family protein, MANGANESE (II) ION 著者 Krieger, I.V, Chemelewski, V, Guo, T, Sperber, A, Herman, J, Sacchettini, J.C. 登録日 2023-05-13 公開日 2023-11-01 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.26 Å) 主引用文献 Bacillus subtilis YisK possesses oxaloacetate decarboxylase activity and exhibits Mbl-dependent localization. J.Bacteriol., 206, 2024
6EO7	X-ray structure of the complex between human alpha-thrombin and modified 15-mer DNA aptamer containing 5-(3-(acetamide-N-yl)-1-propen-1-yl)-2'-deoxyuridine residue 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, GA68B2 - MODIFIED HUMAN THROMBIN BINDING APTAMER, ... 著者 Dolot, R.M, Nawrot, B, Yang, X. 登録日 2017-10-09 公開日 2017-10-18 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.24 Å) 主引用文献 Crystal structures of thrombin in complex with chemically modified thrombin DNA aptamers reveal the origins of enhanced affinity. Nucleic Acids Res., 46, 2018
6EOO	DPP8 - Apo, space group 20 分子名称: Dipeptidyl peptidase 8 著者 Ross, B.R, Huber, R. 登録日 2017-10-10 公開日 2018-02-07 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structures and mechanism of dipeptidyl peptidases 8 and 9, important players in cellular homeostasis and cancer. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5KO1	Pseudokinase Domain of MLKL bound to Compound 4. 分子名称: Mixed lineage kinase domain-like protein, [(1~{R})-2-[(4-fluorophenyl)amino]-2-oxidanylidene-1-phenyl-ethyl] 3-azanylpyrazine-2-carboxylate 著者 Marcotte, D.J. 登録日 2016-06-29 公開日 2016-11-16 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.16 Å) 主引用文献 ATP-Competitive MLKL Binders Have No Functional Impact on Necroptosis. Plos One, 11, 2016
1EA4	TRANSCRIPTIONAL REPRESSOR COPG/22bp dsDNA COMPLEX 分子名称: DNA (5'-D(*TP*AP*AP*CP*CP*GP*TP*GP *CP*AP*CP*TP*CP*AP*AP*TP*GP*CP*AP*AP*TP*C)-3'), DNA(5'-D(*AP*GP*AP*TP*TP*GP*CP*AP*TP *TP*GP*AP*GP*TP*GP*CP*AP*CP*GP*GP*TP*T)-3'), TRANSCRIPTIONAL REPRESSOR COPG 著者 Gomis-Rueth, F.X, Costa, M, Sola, M, Acebo, P, Eritja, R, Espinosa, M, Solar, G.D, Coll, M. 登録日 2000-11-05 公開日 2001-07-05 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.95 Å) 主引用文献 Plasmid Transcriptional Repressor Copg Oligomerises to Render Helical Superstructures Unbound and in Complexes with Oligonucleotides J.Mol.Biol., 310, 2001
6IPV	Crystal structure of CqsB2 from Streptomyces exfoliatus 2419-SVT2 (apo form) 分子名称: CqsB2 著者 Tomita, T, Kobayashi, M, Nishiyama, M, Kuzuyama, T. 登録日 2018-11-05 公開日 2019-10-16 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 An Unprecedented Cyclization Mechanism in the Biosynthesis of Carbazole Alkaloids in Streptomyces. Angew.Chem.Int.Ed.Engl., 58, 2019
7SC4	filamin complex-1 分子名称: Filamin-A/Integrin alpha-IIb light chain, form 2 chimera, SULFATE ION 著者 Liu, J, Qin, J. 登録日 2021-09-27 公開日 2023-04-12 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 A mechanism of platelet integrin alpha IIb beta 3 outside-in signaling through a novel integrin alpha IIb subunit-filamin-actin linkage. Blood, 141, 2023
6IQC	Wild-type Programmed Cell Death 5 protein from Sulfolobus solfataricus 分子名称: DNA-binding protein SSO0352, SODIUM ION, TETRAETHYLENE GLYCOL 著者 Chen, C.Y, Lin, K.F, Hsu, C.Y, Tsai, M.J. 登録日 2018-11-06 公開日 2019-02-20 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.49 Å) 主引用文献 Crystal structure of the programmed cell death 5 protein from Sulfolobus solfataricus. Acta Crystallogr F Struct Biol Commun, 75, 2019
5KXK	Hen Egg White Lysozyme at 100K, Data set 1 分子名称: ACETATE ION, CHLORIDE ION, Lysozyme C, ... 著者 Russi, S, Gonzalez, A, Kenner, L.R, Keedy, D.A, Fraser, J.S, van den Bedem, H. 登録日 2016-07-20 公開日 2016-09-07 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.198 Å) 主引用文献 Conformational variation of proteins at room temperature is not dominated by radiation damage. J Synchrotron Radiat, 24, 2017
8STW	K384N HUMAN CYSTATHIONINE BETA-SYNTHASE (delta 411-551) 分子名称: Cystathionine beta-synthase, K384N variant, PROTOPORPHYRIN IX CONTAINING FE, ... 著者 Mascarenhas, R, Roman, J, Banerjee, R. 登録日 2023-05-11 公開日 2023-11-22 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Disease-causing cystathionine beta-synthase linker mutations impair allosteric regulation. J.Biol.Chem., 299, 2023
6IQO	Se-Met L45M Programmed Cell Death 5 protein from Sulfolobus solfataricus 分子名称: DNA-binding protein SSO0352, NONAETHYLENE GLYCOL 著者 Chen, C.Y, Lin, K.F, Hsu, C.Y, Tsai, M.J. 登録日 2018-11-08 公開日 2019-02-20 実験手法 X-RAY DIFFRACTION (2.11 Å) 主引用文献 Crystal structure of the programmed cell death 5 protein from Sulfolobus solfataricus. Acta Crystallogr F Struct Biol Commun, 75, 2019

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