PDB: 66507 件ウェブページステータス検索Chemie searchBIRD

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3C4T	Structure of RNaseIIIb and dsRNA binding domains of mouse Dicer 分子名称: CADMIUM ION, Endoribonuclease Dicer 著者 Lee, J.K, Du, Z, Tjhen, R.J, Stroud, R.M, James, T.L. 登録日 2008-01-30 公開日 2008-02-19 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural and biochemical insights into the dicing mechanism of mouse Dicer: A conserved lysine is critical for dsRNA cleavage. Proc.Natl.Acad.Sci.Usa, 105, 2008
8QES	E coli NfsB with the unnatural amino acid, p-aminoPhe at position 124 分子名称: FLAVIN MONONUCLEOTIDE, NICOTINIC ACID, Oxygen-insensitive NAD(P)H nitroreductase 著者 Day, M.A, White, S.A, Hyde, E.I. 登録日 2023-09-01 公開日 2024-08-14 実験手法 X-RAY DIFFRACTION (2.48 Å) 主引用文献 The structure of E coli NfsB nitroreducasr with unnatural amino acids at position 124 To Be Published
6DXH	Structure of USP5 zinc-finger ubiquitin binding domain co-crystallized with 4-(4-tert-butylphenyl)-4-oxobutanoate 分子名称: 4-(4-tert-butylphenyl)-4-oxobutanoic acid, UNKNOWN ATOM OR ION, Ubiquitin carboxyl-terminal hydrolase 5, ... 著者 Harding, R.J, Mann, M.K, Ravichandran, M, Ferreira de Freitas, R, Franzoni, I, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Schapira, M, Structural Genomics Consortium (SGC) 登録日 2018-06-28 公開日 2018-07-18 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Discovery of Small Molecule Antagonists of the USP5 Zinc Finger Ubiquitin-Binding Domain. J.Med.Chem., 62, 2019
3CA0	Sambucus nigra agglutinin II (SNA-II), hexagonal crystal form 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, Agglutinin II, ... 著者 Maveyraud, L, Niwa, H, Guillet, V, Palmer, R.A, Reynolds, C.D, Mourey, L. 登録日 2008-02-19 公開日 2008-11-25 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Structural basis for sugar recognition, including the Tn carcinoma antigen, by the lectin SNA-II from Sambucus nigra Proteins, 75, 2009
1DKL	CRYSTAL STRUCTURE OF ESCHERICHIA COLI PHYTASE AT PH 4.5 (NO LIGAND BOUND) 分子名称: PHYTASE 著者 Lim, D, Golovan, S, Forsberg, C.W, Jia, Z. 登録日 1999-12-08 公開日 2000-08-03 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structures of Escherichia coli phytase and its complex with phytate. Nat.Struct.Biol., 7, 2000
3C51	Crystal structure of G protein coupled receptor kinase 1 bound to ADP and magnesium chloride at 3.55A 分子名称: ADENOSINE-5'-DIPHOSPHATE, BROMIDE ION, MAGNESIUM ION, ... 著者 Singh, P, Tesmer, J.J.G. 登録日 2008-01-30 公開日 2008-03-11 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (3.55 Å) 主引用文献 Structures of rhodopsin kinase in different ligand states reveal key elements involved in G protein-coupled receptor kinase activation. J.Biol.Chem., 283, 2008
6DNK	Human Stimulator of Interferon Genes 分子名称: Stimulator of interferon genes protein, cGAMP 著者 Fernandez, D, Li, L, Ergun, S.L. 登録日 2018-06-06 公開日 2019-03-13 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 STING Polymer Structure Reveals Mechanisms for Activation, Hyperactivation, and Inhibition. Cell, 178, 2019
3C5O	Crystal structure of the conserved protein of unknown function RPA1785 from Rhodopseudomonas palustris 分子名称: GLYCEROL, UPF0311 protein RPA1785 著者 Kim, Y, Evdokimova, E, Kudritska, M, Savchenko, A, Edwards, A.M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) 登録日 2008-02-01 公開日 2008-02-19 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 The Crystal Structure of the Conserved Protein of Unknown Function RPA1785 from Rhodopseudomonas palustris. To be Published
7RZY	CryoEM structure of Vibrio cholerae transposon Tn6677 AAA+ ATPase TnsC 分子名称: ADENOSINE-5'-TRIPHOSPHATE, Tn6677 Vibrio cholerae transposon TnsC (VchTnsC) 著者 Hoffmann, F.T, Kim, M, Beh, L.Y, Wang, J, Vo, P.L.H, Gelsinger, D.R, Acree, C, Mohabir, J.T, Fernandez, I.S, Sternberg, S.H. 登録日 2021-08-28 公開日 2022-06-08 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Selective TnsC recruitment enhances the fidelity of RNA-guided transposition. Nature, 609, 2022
6DXT	Structure of USP5 zinc-finger ubiquitin binding domain co-crystallized with 3-(5-phenyl-1,3,4-oxadiazol-2-yl)propanoate 分子名称: 1,2-ETHANEDIOL, 3-(5-phenyl-1,3,4-oxadiazol-2-yl)propanoic acid, UNKNOWN ATOM OR ION, ... 著者 Mann, M.K, Harding, R.J, Ravichandran, M, Ferreira de Freitas, R, Franzoni, I, Bountra, C, Edwards, A.M, Arrowsmith, C.M, Schapira, M, Structural Genomics Consortium (SGC) 登録日 2018-06-29 公開日 2018-08-08 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Discovery of Small Molecule Antagonists of the USP5 Zinc Finger Ubiquitin-Binding Domain. J.Med.Chem., 62, 2019
7SKW	Ab initio structure of triclinic lysozyme from electron-counted MicroED data 分子名称: Lysozyme C, NITRATE ION 著者 Martynowycz, M.W, Clabbers, M.T.B, Hattne, J, Gonen, T. 登録日 2021-10-21 公開日 2022-06-08 最終更新日 2022-06-22 実験手法 ELECTRON CRYSTALLOGRAPHY (0.87 Å) 主引用文献 Ab initio phasing macromolecular structures using electron-counted MicroED data. Nat.Methods, 19, 2022
7SJQ	Ex silico engineering of cystine-dense peptides yielding a potent bispecific T-cell engager 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Cystine-dense peptide, GLYCEROL, ... 著者 Rupert, P.B, Strong, R. 登録日 2021-10-18 公開日 2022-06-08 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Ex silico engineering of cystine-dense peptides yielding a potent bispecific T cell engager. Sci Transl Med, 14, 2022
3C6S	Crystal structure of Fab F22-4 in complex with a Shigella flexneri 2a O-Ag pentadecasaccharide 分子名称: Fab F22-4 heavy chain, Fab F22-4 light chain, PALLADIUM ION, ... 著者 Saul, F.A, Vulliez-le-Normand, B, Bentley, G.A. 登録日 2008-02-05 公開日 2008-07-01 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structures of synthetic O-antigen fragments from serotype 2a Shigella flexneri in complex with a protective monoclonal antibody Proc.Natl.Acad.Sci.Usa, 105, 2008
3CBQ	Crystal structure of the human REM2 GTPase with bound GDP 分子名称: 1,2-ETHANEDIOL, GTP-binding protein REM 2, GUANOSINE-5'-DIPHOSPHATE, ... 著者 Nedyalkova, L, Shen, Y, Tong, Y, Tempel, W, MacKenzie, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC) 登録日 2008-02-22 公開日 2008-03-04 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.82 Å) 主引用文献 Crystal structure of the human REM2 GTPase with bound GDP. To be Published
3C4X	Crystal Structure of G protein coupled receptor kinase 1 bound to ATP and magnesium chloride at 2.9A 分子名称: ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, MAGNESIUM ION, ... 著者 Singh, P, Tesmer, J.J.G. 登録日 2008-01-30 公開日 2008-03-11 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Structures of rhodopsin kinase in different ligand states reveal key elements involved in G protein-coupled receptor kinase activation. J.Biol.Chem., 283, 2008
8R2B	X-ray crystallographic structure of SnoaL2 in complex with the polyketide substrate 分子名称: 3',4'-demethoxy-nogalose-nogalamycinone, SnoL 著者 Schnell, R, Schneider, G. 登録日 2023-11-03 公開日 2024-08-07 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Mechanism of Two-Component Mono-Oxygenases Involved in Anthracycline 1-Hydroxylation Acs Catalysis, 2024
7SKX	Ab initio structure of proteinase K from electron-counted MicroED data 分子名称: 5-amino-2,4,6-triiodobenzene-1,3-dicarboxylic acid, CALCIUM ION, Proteinase K 著者 Martynowycz, M.W, Clabbers, M.T.B, Hattne, J, Gonen, T. 登録日 2021-10-21 公開日 2022-06-08 最終更新日 2022-06-22 実験手法 ELECTRON CRYSTALLOGRAPHY (1.5 Å) 主引用文献 Ab initio phasing macromolecular structures using electron-counted MicroED data. Nat.Methods, 19, 2022
8R20	X-ray crystallographic structure of KstA15, polyketide biosynthesis enzyme 分子名称: GLYCEROL, Hydroxylase 著者 Schnell, R, Schneider, G. 登録日 2023-11-02 公開日 2024-08-07 最終更新日 2024-08-14 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Mechanism of Two-Component Mono-Oxygenases Involved in Anthracycline 1-Hydroxylation Acs Catalysis, 2024
3C66	Yeast poly(A) polymerase in complex with Fip1 residues 80-105 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, Poly(A) polymerase, ... 著者 Bohm, A, Meinke, G. 登録日 2008-02-02 公開日 2008-05-20 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structure of yeast poly(A) polymerase in complex with a peptide from Fip1, an intrinsically disordered protein. Biochemistry, 47, 2008
3C7G	Crystal structure of a glycoside hydrolase family 43 arabinoxylan arabinofuranohydrolase from Bacillus subtilis in complex with xylotetraose. 分子名称: CALCIUM ION, Endo-1,4-beta-xylanase, GLYCEROL, ... 著者 Vandermarliere, E, Bourgois, T.M, Winn, M.D, Van Campenhout, S, Volckaert, G, Strelkov, S.V, Delcour, J.A, Rabijns, A, Courtin, C.M. 登録日 2008-02-07 公開日 2008-11-18 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.02 Å) 主引用文献 Structural analysis of a glycoside hydrolase family 43 arabinoxylan arabinofuranohydrolase in complex with xylotetraose reveals a different binding mechanism compared with other members of the same family. Biochem.J., 418, 2009
3C7U	Structural Insight into the Kinetics and Cp of interactions between TEM-1-Lactamase and BLIP 分子名称: Beta-lactamase, Beta-lactamase inhibitory protein 著者 Wang, J, Chow, D.-C. 登録日 2008-02-08 公開日 2008-10-07 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural insight into the kinetics and DeltaCp of interactions between TEM-1 beta-lactamase and beta-lactamase inhibitory protein (BLIP) J.Biol.Chem., 284, 2009
2YCC	OXIDATION STATE-DEPENDENT CONFORMATIONAL CHANGES IN CYTOCHROME C 分子名称: CYTOCHROME C, HEME C, SULFATE ION 著者 Berghuis, A.M, Brayer, G.D. 登録日 1991-01-29 公開日 1992-07-15 最終更新日 2021-03-03 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Oxidation state-dependent conformational changes in cytochrome c. J.Mol.Biol., 223, 1992
3C8V	Crystal structure of putative acetyltransferase (YP_390128.1) from Desulfovibrio desulfuricans G20 at 2.28 A resolution 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, MAGNESIUM ION, ... 著者 Joint Center for Structural Genomics (JCSG) 登録日 2008-02-13 公開日 2008-02-26 最終更新日 2023-02-01 実験手法 X-RAY DIFFRACTION (2.28 Å) 主引用文献 Crystal structure of putative acetyltransferase (YP_390128.1) from Desulfovibrio desulfuricans G20 at 2.28 A resolution To be published
5KCZ	horse liver S48T alcohol dehydrogenase complexed with NAD and trifluoroethanol 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, Alcohol dehydrogenase E chain, NICOTINAMIDE-ADENINE-DINUCLEOTIDE (ACIDIC FORM), ... 著者 Plapp, B.V. 登録日 2016-06-07 公開日 2016-06-29 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.14 Å) 主引用文献 Inversion of substrate stereoselectivity of horse liver alcohol dehydrogenase by substitutions of Ser-48 and Phe-93. Chem. Biol. Interact., 276, 2017
6IEQ	Crystal Structure of HIV-1 Env ConM SOSIP.v7 in Complex with bNAb PGT124 and 35O22 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 35O22 Fab Heavy Chain, ... 著者 Han, B.W, Wilson, I.A. 登録日 2018-09-16 公開日 2019-05-22 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (3.9 Å) 主引用文献 Structure and immunogenicity of a stabilized HIV-1 envelope trimer based on a group-M consensus sequence. Nat Commun, 10, 2019

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