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5CHV
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Crystal structure of USP18-ISG15 complex
分子名称: CHLORIDE ION, SULFATE ION, Ubiquitin-like protein ISG15, ...
著者Fritz, G, Basters, A.
登録日2015-07-10
公開日2016-09-28
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.005 Å)
主引用文献Structural basis of the specificity of USP18 toward ISG15.
Nat. Struct. Mol. Biol., 24, 2017
7JJU
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BU of 7jju by Molmil
Crystal structure of en exoribonuclease-resistant RNA (xrRNA) from Potato leafroll virus (PLRV)
分子名称: CACODYLATE ION, Guanidinium, IRIDIUM HEXAMMINE ION, ...
著者Steckelberg, A.-L, Vicens, Q, Auffinger, P, Costantino, D.C, Nix, J.C, Kieft, J.S.
登録日2020-07-27
公開日2020-09-09
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.604 Å)
主引用文献The crystal structure of a Polerovirus exoribonuclease-resistant RNA shows how diverse sequences are integrated into a conserved fold.
Rna, 26, 2020
5D3I
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BU of 5d3i by Molmil
Crystal structure of the SSL3-TLR2 complex
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Feitsma, L.J, Huizinga, E.G.
登録日2015-08-06
公開日2015-08-19
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis for inhibition of TLR2 by staphylococcal superantigen-like protein 3 (SSL3).
Proc.Natl.Acad.Sci.USA, 112, 2015
7DUX
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BU of 7dux by Molmil
Crystal structure of VIM-2 MBL in complex with 1-(but-3-en-1-yl)-1H-imidazole-2-carboxylic acid
分子名称: 1-but-3-enylimidazole-2-carboxylic acid, Beta-lactamase class B VIM-2, GLYCEROL, ...
著者Li, G.-B, Yan, Y.-H.
登録日2021-01-12
公開日2022-01-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.981 Å)
主引用文献Structure-guided optimization of 1H-imidazole-2-carboxylic acid derivatives affording potent VIM-Type metallo-beta-lactamase inhibitors.
Eur.J.Med.Chem., 228, 2022
7DYZ
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BU of 7dyz by Molmil
Crystal structure of VIM-2 MBL in complex with 1-(but-3-en-1-yl)-4-methyl-1H-imidazole-2-carboxylic acid
分子名称: 1-but-3-enyl-4-methyl-imidazole-2-carboxylic acid, Beta-lactamase class B VIM-2, GLYCEROL, ...
著者Yan, Y.-H, Li, G.-B.
登録日2021-01-23
公開日2022-01-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.902 Å)
主引用文献Structure-guided optimization of 1H-imidazole-2-carboxylic acid derivatives affording potent VIM-Type metallo-beta-lactamase inhibitors.
Eur.J.Med.Chem., 228, 2022
7DZ0
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BU of 7dz0 by Molmil
Crystal structure of VIM-2 MBL in complex with 1-(but-3-en-1-yl)-5-methyl-1H-imidazole-2-carboxylic acid
分子名称: 1-but-3-enyl-5-methyl-imidazole-2-carboxylic acid, Beta-lactamase class B VIM-2, ZINC ION
著者Yan, Y.-H, Li, G.-B.
登録日2021-01-23
公開日2022-01-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.227 Å)
主引用文献Structure-guided optimization of 1H-imidazole-2-carboxylic acid derivatives affording potent VIM-Type metallo-beta-lactamase inhibitors.
Eur.J.Med.Chem., 228, 2022
7FD2
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BU of 7fd2 by Molmil
Cryo-EM structure of an alphavirus, Getah virus
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Liu, Z, Liu, C, Wang, A.
登録日2021-07-15
公開日2022-08-10
実験手法ELECTRON MICROSCOPY (2.81 Å)
主引用文献Structure of infective Getah virus at 2.8 angstrom resolution determined by cryo-electron microscopy.
Cell Discov, 8, 2022
4EWS
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BU of 4ews by Molmil
Crystal structure of cholesteryl ester transfer protein in complex with inhibitors
分子名称: 1,2-DILINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CETP, CHLORIDE ION, ...
著者Liu, S, Qiu, X.
登録日2012-04-27
公開日2012-09-05
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Crystal structures of cholesteryl ester transfer protein in complex with inhibitors.
J.Biol.Chem., 287, 2012
5XA9
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BU of 5xa9 by Molmil
Complete structure factors and an atomic model of the calcium pump (SERCA1A) and associated phospholipids in the E2-ALF-(TG) crystals of C2 symmetry
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, MAGNESIUM ION, OCTANOIC ACID [3S-[3ALPHA, ...
著者Norimatsu, Y, Hasegawa, K, Shimizu, N, Toyoshima, C.
登録日2017-03-11
公開日2017-06-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Protein-phospholipid interplay revealed with crystals of a calcium pump.
Nature, 545, 2017
5XA7
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BU of 5xa7 by Molmil
Complete structure factors and an atomic model of the calcium pump (SERCA1A) and associated phospholipids in the E1-2CA2+ crystals
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CALCIUM ION, SODIUM ION, ...
著者Norimatsu, Y, Hasegawa, K, Shimizu, N, Toyoshima, C.
登録日2017-03-11
公開日2017-05-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Protein-phospholipid interplay revealed with crystals of a calcium pump.
Nature, 545, 2017
5XAB
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BU of 5xab by Molmil
Complete structure factors and an atomic model of the calcium pump (SERCA1A) and associated phospholipids in the E2(TG) crystals
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, OCTANOIC ACID [3S-[3ALPHA, 3ABETA, ...
著者Norimatsu, Y, Hasegawa, K, Shimizu, N, Toyoshima, C.
登録日2017-03-11
公開日2017-06-07
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Protein-phospholipid interplay revealed with crystals of a calcium pump.
Nature, 545, 2017
8JR9
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BU of 8jr9 by Molmil
Small molecule agonist (PCO371) bound to human parathyroid hormone receptor type 1 (PTH1R)
分子名称: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(s) subunit alpha-1, ...
著者Zhao, L, He, Q, Yuan, Q, Gu, Y, He, X, Shan, H, Li, J, Wang, K, Li, Y, Hu, W, Wu, K, Shen, J, Xu, H.E.
登録日2023-06-16
公開日2023-08-02
最終更新日2023-10-04
実験手法ELECTRON MICROSCOPY (2.57 Å)
主引用文献Conserved class B GPCR activation by a biased intracellular agonist.
Nature, 621, 2023
8JFZ
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BU of 8jfz by Molmil
Cryo-EM structure of Na+,K+-ATPase in the E1.Mg2+ state.
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Kanai, R, Vilsen, B, Cornelius, F, Toyoshima, C.
登録日2023-05-19
公開日2023-08-09
最終更新日2023-08-16
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Crystal structures of Na + ,K + -ATPase reveal the mechanism that converts the K + -bound form to Na + -bound form and opens and closes the cytoplasmic gate.
Febs Lett., 597, 2023
8JBM
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BU of 8jbm by Molmil
Crystal structure of Na+,K+-ATPase in the E1.Mn2+ state
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Kanai, R, Vilsen, B, Cornelius, F, Toyoshima, C.
登録日2023-05-09
公開日2023-08-09
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structures of Na + ,K + -ATPase reveal the mechanism that converts the K + -bound form to Na + -bound form and opens and closes the cytoplasmic gate.
Febs Lett., 597, 2023
8JBL
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BU of 8jbl by Molmil
Crystal structure of Na+,K+-ATPase in the E1.Mg2+ state
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Kanai, R, Vilsen, B, Cornelius, F, Toyoshima, C.
登録日2023-05-09
公開日2023-08-09
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structures of Na + ,K + -ATPase reveal the mechanism that converts the K + -bound form to Na + -bound form and opens and closes the cytoplasmic gate.
Febs Lett., 597, 2023
8JBK
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BU of 8jbk by Molmil
Crystal structure of Na+,K+-ATPase in the E1.3Na+ state
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Kanai, R, Vilsen, B, Cornelius, F, Toyoshima, C.
登録日2023-05-09
公開日2023-08-09
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structures of Na + ,K + -ATPase reveal the mechanism that converts the K + -bound form to Na + -bound form and opens and closes the cytoplasmic gate.
Febs Lett., 597, 2023
8JOZ
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BU of 8joz by Molmil
Crystal structure of CmoM from E. coli complexed with sinefungin and cellularly expressed tRNA Ser
分子名称: MAGNESIUM ION, SINEFUNGIN, tRNA 5-carboxymethoxyuridine methyltransferase, ...
著者Yoo, J, Kim, J.
登録日2023-06-09
公開日2023-08-30
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献Structural basis for the selective methylation of 5-carboxymethoxyuridine in tRNA modification.
Nucleic Acids Res., 51, 2023
8JMN
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BU of 8jmn by Molmil
Cryo-EM structure of the gastric proton pump with bound DQ-21
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-[4-[[2-[(4-chlorophenyl)methoxy]phenyl]methoxy]phenyl]-N-methyl-methanamine, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Abe, K, Yokoshima, S, Yoshimori, A.
登録日2023-06-05
公開日2023-08-30
最終更新日2023-10-04
実験手法ELECTRON MICROSCOPY (2.26 Å)
主引用文献Deep learning driven de novo drug design based on gastric proton pump structures.
Commun Biol, 6, 2023
8J00
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BU of 8j00 by Molmil
Human KCNQ2-CaM in complex with CBD
分子名称: Calmodulin-1, Potassium voltage-gated channel subfamily KQT member 2, cannabidiol
著者Ma, D, Li, X, Guo, J.
登録日2023-04-09
公開日2023-11-29
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Ligand activation mechanisms of human KCNQ2 channel.
Nat Commun, 14, 2023
8J01
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BU of 8j01 by Molmil
Human KCNQ2-CaM in complex with CBD and PIP2
分子名称: Calmodulin-1, Potassium voltage-gated channel subfamily KQT member 2, [(2R)-2-octanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate, ...
著者Ma, D, Li, X, Guo, J.
登録日2023-04-09
公開日2023-12-13
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Ligand activation mechanisms of human KCNQ2 channel.
Nat Commun, 14, 2023
8J02
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Human KCNQ2(F104A)-CaM-PIP2-CBD complex in state II
分子名称: Calmodulin-1, Potassium voltage-gated channel subfamily KQT member 2, [(2R)-2-octanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate, ...
著者Ma, D, Li, X, Guo, J.
登録日2023-04-09
公開日2023-12-13
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Ligand activation mechanisms of human KCNQ2 channel.
Nat Commun, 14, 2023
5YLV
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BU of 5ylv by Molmil
Crystal structure of the gastric proton pump complexed with SCH28080
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-(2-methyl-8-phenylmethoxy-imidazo[1,2-a]pyridin-3-yl)ethanenitrile, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Abe, K, Irie, K, Nakanishi, H, Fujiyoshi, Y.
登録日2017-10-19
公開日2018-04-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.79977775 Å)
主引用文献Crystal structures of the gastric proton pump
Nature, 556, 2018
6HEF
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BU of 6hef by Molmil
Room temperature structure of the (SR)Ca2+-ATPase Ca2-E1-CaAMPPCP form
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CALCIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
著者Hjorth-Jensen, S, Sorensen, T.L.M, Oksanen, E, Andersen, J.L, Olesen, C, Moller, J.V, Nissen, P.
登録日2018-08-20
公開日2018-08-29
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.538 Å)
主引用文献Membrane-protein crystals for neutron diffraction.
Acta Crystallogr D Struct Biol, 74, 2018
8K2W
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BU of 8k2w by Molmil
Structure of CXCR3 complexed with antagonist AMG487
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CHOLESTEROL, N-[(1R)-1-[3-(4-ethoxyphenyl)-4-oxidanylidene-pyrido[2,3-d]pyrimidin-2-yl]ethyl]-N-(pyridin-3-ylmethyl)-2-[4-(trifluoromethyloxy)phenyl]ethanamide, ...
著者Jiao, H.Z, Hu, H.L.
登録日2023-07-14
公開日2023-11-29
最終更新日2023-12-13
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structure basis for the modulation of CXC chemokine receptor 3 by antagonist AMG487.
Cell Discov, 9, 2023
5YLU
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BU of 5ylu by Molmil
Crystal structure of the gastric proton pump complexed with vonoprazan
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-[5-(2-fluorophenyl)-1-pyridin-3-ylsulfonyl-pyrrol-3-yl]-~{N}-methyl-methanamine, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Abe, K, Irie, K, Nakanishi, H, Fujiyoshi, Y.
登録日2017-10-19
公開日2018-04-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.79988956 Å)
主引用文献Crystal structures of the gastric proton pump
Nature, 556, 2018

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