PDB: 47720 件ウェブページステータス検索Chemie searchBIRD

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4JV5	Crystal structures of pseudouridinilated stop codons with ASLs 分子名称: 16S ribosomal RNA, 30S ribosomal protein 20, 30S ribosomal protein S10, ... 著者 Fernandez, I.S, Ng, C.L, Kelley, A.C, Guowei, W, Yu, Y.T, Ramakrishnan, V. 登録日 2013-03-25 公開日 2013-06-26 最終更新日 2013-08-21 実験手法 X-RAY DIFFRACTION (3.162 Å) 主引用文献 Unusual base pairing during the decoding of a stop codon by the ribosome. Nature, 500, 2013
5UHA	Crystal structure of Mycobacterium tuberculosis transcription initiation complex 分子名称: DNA (5'-D(*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*CP*GP*AP*GP*G)-3'), DNA (5'-D(*TP*AP*TP*AP*AP*TP*GP*GP*GP*AP*GP*CP*TP*GP*TP*CP*AP*CP*GP*GP*AP*TP*G)-3'), DNA-directed RNA polymerase subunit alpha, ... 著者 Lin, W, Das, K, Feng, Y, Ebright, R.H. 登録日 2017-01-11 公開日 2017-04-12 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (3.906 Å) 主引用文献 Structural Basis of Mycobacterium tuberculosis Transcription and Transcription Inhibition. Mol. Cell, 66, 2017
4Y74	Yeast 20S proteasome in complex with Ac-LAL-ep 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Ac-LAL-ep, CHLORIDE ION, ... 著者 Groll, M, Huber, E.M. 登録日 2015-02-13 公開日 2015-06-17 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Systematic Analyses of Substrate Preferences of 20S Proteasomes Using Peptidic Epoxyketone Inhibitors. J.Am.Chem.Soc., 137, 2015
5CV2	Structural implications of homo-pyrimidine base pairs on the parallel-stranded d(GAY) motif 分子名称: DNA (5'-D(*AP*CP*TP*CP*GP*GP*AP*CP*GP*AP*CP*GP*AP*T)-3'), STRONTIUM ION 著者 Tripathi, S, Paukstelis, P. 登録日 2015-07-25 公開日 2015-12-16 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.693 Å) 主引用文献 Structural Implications of Homopyrimidine Base Pairs in the Parallel-Stranded d(YGA) Motif. Chembiochem, 17, 2016
5TAT	Structure of rabbit RyR1 (Caffeine/ATP/EGTA dataset, class 2) 分子名称: ADENOSINE-5'-TRIPHOSPHATE, CAFFEINE, Peptidyl-prolyl cis-trans isomerase FKBP1B, ... 著者 Clarke, O.B, des Georges, A, Zalk, R, Marks, A.R, Hendrickson, W.A, Frank, J. 登録日 2016-09-10 公開日 2016-10-12 最終更新日 2018-07-18 実験手法 ELECTRON MICROSCOPY (4.8 Å) 主引用文献 Structural Basis for Gating and Activation of RyR1. Cell, 167, 2016
4Y8M	Yeast 20S proteasome beta7-delta7_Cter mutant 分子名称: CHLORIDE ION, MAGNESIUM ION, Probable proteasome subunit alpha type-7, ... 著者 Huber, E.M, Groll, M. 登録日 2015-02-16 公開日 2015-06-17 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Systematic Analyses of Substrate Preferences of 20S Proteasomes Using Peptidic Epoxyketone Inhibitors. J.Am.Chem.Soc., 137, 2015
5TAU	Structure of rabbit RyR1 (Caffeine/ATP/EGTA dataset, class 3) 分子名称: ADENOSINE-5'-TRIPHOSPHATE, CAFFEINE, Peptidyl-prolyl cis-trans isomerase FKBP1B, ... 著者 Clarke, O.B, des Georges, A, Zalk, R, Marks, A.R, Hendrickson, W.A, Frank, J. 登録日 2016-09-10 公開日 2016-10-12 最終更新日 2018-07-18 実験手法 ELECTRON MICROSCOPY (6.2 Å) 主引用文献 Structural Basis for Gating and Activation of RyR1. Cell, 167, 2016
4YVW	crystal structure of an enterovirus 71/coxsackievirus A16 chimeric virus-like particle 分子名称: Capsid protein VP0, Capsid protein VP1, Capsid protein VP3 著者 Chen, R, Lyu, K. 登録日 2015-03-20 公開日 2015-04-15 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (3.8 Å) 主引用文献 Crystal Structures of Yeast-Produced Enterovirus 71 and Enterovirus 71/Coxsackievirus A16 Chimeric Virus-Like Particles Provide the Structural Basis for Novel Vaccine Design against Hand-Foot-and-Mouth Disease J.Virol., 89, 2015
5OKD	Crystal structure of bovine Cytochrome bc1 in complex with inhibitor SCR0911. 分子名称: 1,2-DIHEXANOYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, ... 著者 Amporndanai, K, O'Neill, P.M, Hasnain, S.S, Antonyuk, S.V. 登録日 2017-07-25 公開日 2018-02-28 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 X-ray and cryo-EM structures of inhibitor-bound cytochromebc1complexes for structure-based drug discovery. IUCrJ, 5, 2018
5CZ5	Yeast 20S proteasome beta1-T1A mutant in complex with Carfilzomib 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, MAGNESIUM ION, ... 著者 Huber, E.M, Groll, M. 登録日 2015-07-31 公開日 2016-03-23 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 A unified mechanism for proteolysis and autocatalytic activation in the 20S proteasome. Nat Commun, 7, 2016
5D0W	Yeast 20S proteasome beta5-T1S mutant 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, MAGNESIUM ION, Probable proteasome subunit alpha type-7, ... 著者 Huber, E.M, Groll, M. 登録日 2015-08-03 公開日 2016-03-23 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 A unified mechanism for proteolysis and autocatalytic activation in the 20S proteasome. Nat Commun, 7, 2016
5D4D	Crystal structure of Thermus thermophilus product complex for transcription initiation with NAD and CTP 分子名称: ADENOSINE MONOPHOSPHATE, CYTIDINE-5'-MONOPHOSPHATE, CYTIDINE-5'-TRIPHOSPHATE, ... 著者 Zhang, Y, Ebright, R.H. 登録日 2015-08-07 公開日 2016-07-06 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 The mechanism of RNA 5' capping with NAD(+), NADH and desphospho-CoA. Nature, 535, 2016
2WUU	Structure of N-myristoyltransferase from L. donovani 分子名称: 2-oxopentadecyl-CoA, N-MYRISTOYLTRANSFERASE 著者 Brannigan, J.A, Smith, B.A, Yu, Z, Hodgkinson, M.R, Leatherbarrow, R.J, Tate, E.W, Brzozowski, A.M, Smith, D.F, Wilkinson, A.J. 登録日 2009-10-09 公開日 2009-12-01 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.42 Å) 主引用文献 N-Myristoyltransferase from Leishmania Donovani: Structural and Functional Characterisation of a Potential Drug Target for Visceral Leishmaniasis. J.Mol.Biol., 396, 2010
2WV0	Crystal structure of the GntR-HutC family member YvoA from Bacillus subtilis 分子名称: HTH-TYPE TRANSCRIPTIONAL REPRESSOR YVOA, SULFATE ION 著者 Resch, M, Schiltz, E, Titgemeyer, F, Muller, Y.A. 登録日 2009-10-12 公開日 2010-01-12 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Insight Into the Induction Mechanism of the Gntr/Hutc Bacterial Transcription Regulator Yvoa Nucleic Acids Res., 38, 2010
5TBZ	E. Coli RNA Polymerase complexed with NusG 分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... 著者 Liu, B, Steitz, T.A. 登録日 2016-09-13 公開日 2016-12-07 最終更新日 2019-12-25 実験手法 X-RAY DIFFRACTION (7 Å) 主引用文献 Structural insights into NusG regulating transcription elongation. Nucleic Acids Res., 45, 2017
4DU2	cytochrome P450 BM3h-B7 MRI sensor bound to dopamine 分子名称: L-DOPAMINE, PROTOPORPHYRIN IX CONTAINING FE, cytochrome P450 BM3 variant B7 著者 Brustad, E.M, Lelyveld, V.S, Snow, C.D, Crook, N, Martinez, F.M, Scholl, T.J, Jasanoff, A, Arnold, F.H. 登録日 2012-02-21 公開日 2012-06-13 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structure-guided directed evolution of highly selective p450-based magnetic resonance imaging sensors for dopamine and serotonin. J.Mol.Biol., 422, 2012
4YK9	Complex structure of BCL-XL and mutated BIM BH3 domain 分子名称: ACETATE ION, BH3BIM, Bcl-2-like protein 1, ... 著者 Ha, N.C, Kim, J.S. 登録日 2015-03-04 公開日 2016-04-13 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Complex structure of BCL-XL and mutated BIM BH3 domain To be published
5TC9	Wild type TrCel7A catalytic domain in a closed state 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GADOLINIUM ION, Glucanase, ... 著者 Bodenheimer, A.M, Meilleur, F. 登録日 2016-09-14 公開日 2017-01-04 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Crystal structures of wild-type Trichoderma reesei Cel7A catalytic domain in open and closed states. FEBS Lett., 590, 2016
2WIN	C3 convertase (C3bBb) stabilized by SCIN 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, COMPLEMENT C3 BETA CHAIN, ... 著者 Wu, J, Janssen, B.J, Gros, P. 登録日 2009-05-13 公開日 2009-06-09 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (3.9 Å) 主引用文献 Structural and functional implications of the alternative complement pathway C3 convertase stabilized by a staphylococcal inhibitor. Nat. Immunol., 10, 2009
3D81	Sir2-S-alkylamidate complex crystal structure 分子名称: NAD-dependent deacetylase, S-alkylamidate intermediate, ZINC ION 著者 Hawse, W.F, Hoff, K.G, Fatkins, D, Daines, A, Zubkova, O.V, Schramm, V.L, Zheng, W, Wolberger, C. 登録日 2008-05-22 公開日 2008-09-30 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural insights into intermediate steps in the Sir2 deacetylation reaction. Structure, 16, 2008
4YLO	E. coli Transcription Initiation Complex - 16-bp spacer and 4-nt RNA 分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... 著者 Zuo, Y, Steitz, T.A. 登録日 2015-03-05 公開日 2015-04-22 最終更新日 2019-12-25 実験手法 X-RAY DIFFRACTION (6 Å) 主引用文献 Crystal Structures of the E. coli Transcription Initiation Complexes with a Complete Bubble. Mol.Cell, 58, 2015
5D2Q	Crystal structure of STPR from Bombyx Mori in complex with 20-bp DNA derived from +290 site of the fibroin gene 分子名称: DNA (40-MER), Fibroin-modulator-binding protein-1 著者 Cheng, W. 登録日 2015-08-06 公開日 2016-03-23 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structures of an all-alpha protein running along the DNA major groove. Nucleic Acids Res., 2016
5THW	Crystal structure of Amidase, hydantoinase/carbamoylase family from Burkholderia multivorans 分子名称: 1,2-ETHANEDIOL, Deacylase, N-(AMINOCARBONYL)-BETA-ALANINE, ... 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2016-09-30 公開日 2016-11-09 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal structure of Amidase, hydantoinase/carbamoylase family from Burkholderia multivorans TO BE PUBLISHED
4Y6V	Yeast 20S proteasome in complex with Ac-PAE-ep 分子名称: Ac-PAE-ep, MAGNESIUM ION, Probable proteasome subunit alpha type-7, ... 著者 Huber, E.M, Groll, M. 登録日 2015-02-13 公開日 2015-06-17 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Systematic Analyses of Substrate Preferences of 20S Proteasomes Using Peptidic Epoxyketone Inhibitors. J.Am.Chem.Soc., 137, 2015
4Y84	Yeast 20S proteasome in complex with N3-A(4,4-F2P)nLL-ep 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, MAGNESIUM ION, ... 著者 Huber, E.M, Groll, M. 登録日 2015-02-16 公開日 2015-06-17 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Systematic Analyses of Substrate Preferences of 20S Proteasomes Using Peptidic Epoxyketone Inhibitors. J.Am.Chem.Soc., 137, 2015

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