PDB: 47720 件ウェブページステータス検索Chemie searchBIRD

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5SMH	PanDDA analysis group deposition -- Crystal Structure of SARS-CoV-2 NSP14 in complex with Z2856434938 分子名称: 1-(5-methoxy-1H-indol-3-yl)-N,N-dimethyl-methanamine, PHOSPHATE ION, Proofreading exoribonuclease nsp14, ... 著者 Imprachim, N, Yosaatmadja, Y, von-Delft, F, Bountra, C, Gileadi, O, Newman, J.A. 登録日 2022-03-03 公開日 2022-03-16 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.64 Å) 主引用文献 PanDDA analysis group deposition To Be Published
4EMS	Crystal Structure Analysis of Coniferyl Alcohol 9-O-Methyltransferase from Linum Nodiflorum 分子名称: Coniferyl alcohol 9-O-methyltransferase, GLYCEROL 著者 Wolters, S, Heine, A, Petersen, M. 登録日 2012-04-12 公開日 2013-05-01 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.7534 Å) 主引用文献 Structural analysis of coniferyl alcohol 9-O-methyltransferase from Linum nodiflorum reveals a novel active-site environment. Acta Crystallogr.,Sect.D, 69, 2013
5B2X	Crystal Structure of P450BM3 mutant with N-perfluoroheptanoyl-L-tryptophan 分子名称: (2~{S})-3-(1~{H}-indol-3-yl)-2-[2,2,3,3,4,4,5,5,6,6,7,7,7-tridecakis(fluoranyl)heptanoylamino]propanoic acid, Bifunctional cytochrome P450/NADPH--P450 reductase, DIMETHYL SULFOXIDE, ... 著者 Cong, Z, Shoji, O, Kasai, C, Sugimoto, H, Shiro, Y, Watanabe, Y. 登録日 2016-02-03 公開日 2017-02-08 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal Structure of P450BM3 with decoy molecules to be published
5B8A	Crystal structure of oxidized chimeric EcAhpC1-186-YFSKHN 分子名称: Alkyl hydroperoxide reductase subunit C,Peroxiredoxin-2, GLYCEROL, SULFATE ION 著者 Kamariah, N, Sek, M.F, Eisenhaber, B, Eisenhaber, F, Gruber, G. 登録日 2016-06-14 公開日 2017-02-01 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Transition steps in peroxide reduction and a molecular switch for peroxide robustness of prokaryotic peroxiredoxins. Sci Rep, 6, 2016
5BNO	Crystal structure of human enterovirus D68 in complex with 6'SLN 分子名称: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ... 著者 Liu, Y, Sheng, J, Meng, G, Xiao, C, Rossmann, M.G. 登録日 2015-05-26 公開日 2015-11-18 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Sialic acid-dependent cell entry of human enterovirus D68. Nat Commun, 6, 2015
2YIQ	Structural analysis of checkpoint kinase 2 in complex with inhibitor PV1322 分子名称: (E)-5-(1-(2-CARBAMIMIDOYLHYDRAZONO)ETHYL)-N-(1H-INDOL-6-YL)-1H-INDOLE-2-CARBOXAMIDE, NITRATE ION, SERINE/THREONINE-PROTEIN KINASE CHK2 著者 Lountos, G.T, Jobson, A.G, Tropea, J.E, Self, C, Zhang, G, Pommier, Y, Shoemaker, R.H, Waugh, D.S. 登録日 2011-05-16 公開日 2011-09-07 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.89 Å) 主引用文献 X-Ray Structures of Checkpoint Kinase 2 in Complex with Inhibitors that Target its Gatekeeper-Dependent Hydrophobic Pocket. FEBS Lett., 585, 2011
4HUD	Structure of the bacteriophage T4 tail terminator protein, gp15. 分子名称: Tail connector protein Gp15 著者 Fokine, A, Zhang, Z, Kanamaru, S, Bowman, V.D, Aksyuk, A, Arisaka, F, Rao, V.B, Rossmann, M.G. 登録日 2012-11-02 公開日 2013-02-27 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.7001 Å) 主引用文献 The molecular architecture of the bacteriophage t4 neck. J.Mol.Biol., 425, 2013
4EJI	Human Cytochrome P450 2A13 in complex with two molecules of 4-(methylnitrosamino)-1-(3-puridyl)-1-butanone 分子名称: 4-[methyl(nitroso)amino]-1-(pyridin-3-yl)butan-1-one, Cytochrome P450 2A13, PROTOPORPHYRIN IX CONTAINING FE 著者 DeVore, N.M, Scott, E.E. 登録日 2012-04-06 公開日 2012-06-06 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Nicotine and 4-(methylnitrosamino)-1-(3-pyridyl)-1-butanone binding and access channel in human cytochrome P450 2A6 and 2A13 enzymes. J.Biol.Chem., 287, 2012
5B2Y	Crystal Structure of P450BM3 with N-perfluorodecanoyl-L-tryptophan 分子名称: (2~{S})-3-(1~{H}-indol-3-yl)-2-[2,2,3,3,4,4,5,5,6,6,7,7,8,8,9,9,10,10,10-nonadecakis(fluoranyl)decanoylamino]propanoic acid, Bifunctional cytochrome P450/NADPH--P450 reductase, PROTOPORPHYRIN IX CONTAINING FE 著者 Cong, Z, Shoji, O, Kasai, C, Sugimoto, H, Shiro, Y, Watanabe, Y. 登録日 2016-02-07 公開日 2017-02-08 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.01 Å) 主引用文献 Crystal Structure of P450BM3 with decoy molecules to be published
4XLS	Crystal structure of T. aquaticus transcription initiation complex with CarD containing upstream fork promoter. 分子名称: CarD-like transcriptional regulator, DNA (30-MER), DNA (5'-D(P*GP*CP*AP*CP*AP*AP*TP*TP*TP*AP*AP*CP*AP*CP*TP*TP*TP*TP*GP*TP*CP*AP*AP*G)-3'), ... 著者 Bae, B, Darst, S.A. 登録日 2015-01-13 公開日 2015-09-23 最終更新日 2017-11-22 実験手法 X-RAY DIFFRACTION (4.01 Å) 主引用文献 CarD uses a minor groove wedge mechanism to stabilize the RNA polymerase open promoter complex. Elife, 4, 2015
3B3V	Crystal structure of the S228A mutant of the aminopeptidase from Vibrio proteolyticus 分子名称: Bacterial leucyl aminopeptidase, SODIUM ION, THIOCYANATE ION, ... 著者 Ataie, N.J, Hoang, Q.Q, Zahniser, M.P.D, Milne, A, Petsko, G.A, Ringe, D. 登録日 2007-10-22 公開日 2007-11-27 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.22 Å) 主引用文献 Zinc coordination geometry and ligand binding affinity: the structural and kinetic analysis of the second-shell serine 228 residue and the methionine 180 residue of the aminopeptidase from Vibrio proteolyticus. Biochemistry, 47, 2008
4EQJ	Crystal Structure of inactive single chain variant of HIV-1 Protease in Complex with the substrate RT-RH 分子名称: 1,2-ETHANEDIOL, GLYCEROL, protease, ... 著者 Schiffer, C.A, Mittal, S. 登録日 2012-04-19 公開日 2012-06-06 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural, kinetic, and thermodynamic studies of specificity designed HIV-1 protease. Protein Sci., 21, 2012
5POM	PanDDA analysis group deposition -- Crystal Structure of BRD1 in complex with N10958a 分子名称: 1,2-ETHANEDIOL, Bromodomain-containing protein 1, N-methylquinoline-3-carboxamide, ... 著者 Pearce, N.M, Krojer, T, Talon, R, Bradley, A.R, Fairhead, M, Sethi, R, Wright, N, MacLean, E, Collins, P, Brandao-Neto, J, Douangamath, A, Renjie, Z, Dias, A, Ng, J, Brennan, P.E, Cox, O, Bountra, C, Arrowsmith, C.H, Edwards, A, von Delft, F. 登録日 2017-02-07 公開日 2017-03-15 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.54 Å) 主引用文献 A multi-crystal method for extracting obscured crystallographic states from conventionally uninterpretable electron density. Nat Commun, 8, 2017
3BET	Crystal structure of the human carbonic anhydrase II in complex with STX 641 at 1.85 angstroms resolution 分子名称: (17beta)-17-(cyanomethyl)-2-methoxyestra-1(10),2,4-trien-3-yl sulfamate, Carbonic anhydrase 2, GLYCEROL, ... 著者 Di Fiore, A, De Simone, G. 登録日 2007-11-20 公開日 2008-10-07 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Structure-activity relationships of C-17 cyano-substituted estratrienes as anticancer agents J.Med.Chem., 51, 2008
4XLR	Crystal structure of T.aquaticus transcription initiation complex with CarD containing bubble promoter and RNA 分子名称: CarD-like transcriptional regulator, DNA (48-MER), DNA-directed RNA polymerase subunit alpha, ... 著者 Bae, B, Darst, S.A. 登録日 2015-01-13 公開日 2015-09-23 最終更新日 2017-11-22 実験手法 X-RAY DIFFRACTION (4.3 Å) 主引用文献 CarD uses a minor groove wedge mechanism to stabilize the RNA polymerase open promoter complex. Elife, 4, 2015
3BHK	Crystal structure of R49K mutant of monomeric sarcosine oxidase crystallized in phosphate as precipitant 分子名称: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ... 著者 Hassan-Abdallah, A, Zhao, G, Chen, Z, Mathews, F.S, Jorns, M.S. 登録日 2007-11-28 公開日 2008-02-26 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.71 Å) 主引用文献 Arginine 49 is a bifunctional residue important in catalysis and biosynthesis of monomeric sarcosine oxidase: a context-sensitive model for the electrostatic impact of arginine to lysine mutations. Biochemistry, 47, 2008
3AZ9	Beta-Hydroxyacyl-Acyl Carrier Protein Dehydratase (FabZ) from Plasmodium falciparum in complex with NAS91 分子名称: 4-chloro-2-[(5-chloroquinolin-8-yl)oxy]phenol, Beta-hydroxyacyl-ACP dehydratase, GLYCEROL, ... 著者 Maity, K, Venkata, B.S, Kapoor, N, Surolia, N, Surolia, A, Suguna, K. 登録日 2011-05-21 公開日 2012-02-29 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 Structural basis for the functional and inhibitory mechanisms of beta-hydroxyacyl-acyl carrier protein dehydratase (FabZ) of Plasmodium falciparum J.Struct.Biol., 176, 2011
3B4X	Crystal Structure Analysis of Sulfolobus tokodaii strain7 cytochrom P450 分子名称: 367aa long hypothetical cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE 著者 Kamitori, S, Yoshida, H, Ohtaki, A, Nakamura, N. 登録日 2007-10-24 公開日 2008-11-04 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.94 Å) 主引用文献 Monooxygenation by Thermophilic Cytochrome P450 via Direct Electron Transfer from NADH without Redox Partner To be Published
5PWC	PanDDA analysis group deposition -- Crystal Structure of SP100 in complex with E48115b 分子名称: 1,2-ETHANEDIOL, 2,4-dichloro-N-(pyridin-3-yl)benzamide, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ... 著者 Pearce, N.M, Krojer, T, Talon, R, Bradley, A.R, Fairhead, M, Sethi, R, Wright, N, MacLean, E, Collins, P, Brandao-Neto, J, Douangamath, A, Renjie, Z, Dias, A, Ng, J, Brennan, P.E, Cox, O, Bountra, C, Arrowsmith, C.H, Edwards, A, von Delft, F. 登録日 2017-02-07 公開日 2017-03-15 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.549 Å) 主引用文献 A multi-crystal method for extracting obscured crystallographic states from conventionally uninterpretable electron density. Nat Commun, 8, 2017
5B2U	Crystal Structure of P450BM3 with N-perfluorohexanoyl -L-tryptophan 分子名称: (2~{S})-3-(1~{H}-indol-3-yl)-2-[2,2,3,3,4,4,5,5,6,6,6-undecakis(fluoranyl)hexanoylamino]propanoic acid, Bifunctional cytochrome P450/NADPH--P450 reductase, DIMETHYL SULFOXIDE, ... 著者 Cong, Z, Shoji, O, Kasai, C, Sugimoto, H, Shiro, Y, Watanabe, Y. 登録日 2016-02-03 公開日 2017-02-08 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal Structure of P450BM3 with decoy molecules to be published
4HRT	Scapharca tetrameric hemoglobin, unliganded 分子名称: Globin-2 A chain, Hemoglobin B chain, PHOSPHATE ION, ... 著者 Royer, W.E. 登録日 2012-10-28 公開日 2012-12-12 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.46 Å) 主引用文献 Tertiary and Quaternary Allostery in Tetrameric Hemoglobin from Scapharca inaequivalvis. Biochemistry, 52, 2013
5Q1P	PanDDA analysis group deposition -- Crystal Structure of DCLRE1A in complex with FMOPL000299a 分子名称: 1-cyclohexyl-3-(2-pyridin-4-ylethyl)urea, DNA cross-link repair 1A protein, MALONATE ION, ... 著者 Newman, J.A, Aitkenhead, H, Lee, S.Y, Kupinska, K, Burgess-Brown, N, Tallon, R, Krojer, T, von Delft, F, Arrowsmith, C.H, Edwards, A, Bountra, C, Gileadi, O. 登録日 2017-05-15 公開日 2018-08-08 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.56 Å) 主引用文献 PanDDA analysis group deposition To Be Published
4XIS	A METAL-MEDIATED HYDRIDE SHIFT MECHANISM FOR XYLOSE ISOMERASE BASED ON THE 1.6 ANGSTROMS STREPTOMYCES RUBIGINOSUS STRUCTURES WITH XYLITOL AND D-XYLOSE 分子名称: D-xylose, MANGANESE (II) ION, XYLOSE ISOMERASE, ... 著者 Whitlow, M, Howard, A.J. 登録日 1991-03-25 公開日 1992-07-15 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 A metal-mediated hydride shift mechanism for xylose isomerase based on the 1.6 A Streptomyces rubiginosus structures with xylitol and D-xylose. Proteins, 9, 1991
3BKM	Structure of anti-amyloid-beta Fab WO2 (Form A, P212121) 分子名称: SODIUM ION, WO2 IgG2a Fab fragment Heavy Chain, WO2 IgG2a Fab fragment Light Chain Kappa, ... 著者 Miles, L.A, Wun, K.S, Crespi, G.A, Fodero-Tavoletti, M, Galatis, D, Bageley, C.J, Beyreuther, K, Masters, C.L, Cappai, R, McKinstry, W.J, Barnham, K.J, Parker, M.W. 登録日 2007-12-07 公開日 2008-04-15 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Amyloid-beta-anti-amyloid-beta complex structure reveals an extended conformation in the immunodominant B-cell epitope. J.Mol.Biol., 377, 2008
5B2W	Crystal Structure of P450BM3 with N-perfluorododecanoyl-L-tryptophan 分子名称: (2~{S})-3-(1~{H}-indol-3-yl)-2-[2,2,3,3,4,4,5,5,6,6,7,7,8,8,9,9,10,10,11,11,12,12,12-tricosakis(fluoranyl)dodecanoylamino]propanoic acid, Bifunctional cytochrome P450/NADPH--P450 reductase, PROTOPORPHYRIN IX CONTAINING FE 著者 Cong, Z, Shoji, O, Kasai, C, Sugimoto, H, Shiro, Y, Watanabe, Y. 登録日 2016-02-03 公開日 2017-02-08 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Crystal Structure of P450BM3 with decoy molecules to be published

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