Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1C2X
DownloadVisualize
BU of 1c2x by Molmil
5S RRNA STRUCTURE FITTED TO A CRYO-ELECTRON MICROSCOPIC MAP AT 7.5 ANGSTROMS RESOLUTION
分子名称: 5S RIBOSOMAL RNA
著者Brimacombe, R, Mueller, F.
登録日1999-07-28
公開日2000-04-10
最終更新日2023-12-27
実験手法ELECTRON MICROSCOPY (7.5 Å)
主引用文献The 3D arrangement of the 23 S and 5 S rRNA in the Escherichia coli 50 S ribosomal subunit based on a cryo-electron microscopic reconstruction at 7.5 A resolution.
J.Mol.Biol., 298, 2000
7U0R
DownloadVisualize
BU of 7u0r by Molmil
Crystal structure of Methanomethylophilus alvus PylRS(N166A/V168A) complexed with meta-trifluoromethyl-2-benzylmalonate and AMP-PNP
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Swenson, C.V, Roe, L.T, Fricke, R.C.B, Smaga, S.S, Gee, C.L, Schepartz, A.
登録日2022-02-18
公開日2023-06-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Expanding the substrate scope of pyrrolysyl-transfer RNA synthetase enzymes to include non-alpha-amino acids in vitro and in vivo.
Nat.Chem., 15, 2023
4XFO
DownloadVisualize
BU of 4xfo by Molmil
Structure of an amyloid-forming segment TAVVTN from human Transthyretin
分子名称: Amyloid-forming peptide TAVVTN
著者Saelices, L, Sawaya, M, Cascio, D, Eisenberg, D.S.
登録日2014-12-27
公開日2015-10-21
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Uncovering the Mechanism of Aggregation of Human Transthyretin.
J.Biol.Chem., 290, 2015
7D79
DownloadVisualize
BU of 7d79 by Molmil
The structure of DcsB complex with its substrate analogue
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DltD domain-containing protein, ...
著者Tang, Y, Zhou, J.H, Wang, G.Q.
登録日2020-10-03
公開日2021-01-27
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.10411429 Å)
主引用文献A Polyketide Cyclase That Forms Medium-Ring Lactones.
J.Am.Chem.Soc., 143, 2021
2XVU
DownloadVisualize
BU of 2xvu by Molmil
Human serum albumin complexed with dansyl-L-asparagine
分子名称: DANSYL-L-ASPARAGINE, SERUM ALBUMIN
著者Zunszain, P.A, Curry, S.
登録日2010-10-28
公開日2010-11-10
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural Basis of Binding of Fluorescent, Site-Specific Dansylated Amino Acids to Human Serum Albumin.
J.Struct.Biol., 174, 2011
4XCK
DownloadVisualize
BU of 4xck by Molmil
Vibrio cholerae O395 Ribokinase complexed with ADP, Ribose and Cesium ion.
分子名称: ADENOSINE-5'-DIPHOSPHATE, CESIUM ION, Ribokinase, ...
著者Paul, R, Patra, M.D, Sen, U.
登録日2014-12-18
公開日2015-01-21
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.37 Å)
主引用文献Crystal Structure of Apo and Ligand Bound Vibrio cholerae Ribokinase (Vc-RK): Role of Monovalent Cation Induced Activation and Structural Flexibility in Sugar Phosphorylation.
Adv. Exp. Med. Biol., 842, 2015
7TDF
DownloadVisualize
BU of 7tdf by Molmil
AtTPC1 D454N with 1 mM EDTA state I
分子名称: Two pore calcium channel protein 1
著者Dickinson, M.S, Stroud, R.M.
登録日2021-12-31
公開日2022-02-02
最終更新日2022-03-09
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Molecular basis of multistep voltage activation in plant two-pore channel 1.
Proc.Natl.Acad.Sci.USA, 119, 2022
7TBG
DownloadVisualize
BU of 7tbg by Molmil
AtTPC1 D454N with 1 mM Ca2+
分子名称: CALCIUM ION, SODIUM ION, Two pore calcium channel protein 1
著者Dickinson, M.S, Stroud, R.M.
登録日2021-12-22
公開日2022-02-02
最終更新日2022-03-16
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Molecular basis of multistep voltage activation in plant two-pore channel 1.
Proc.Natl.Acad.Sci.USA, 119, 2022
4XFN
DownloadVisualize
BU of 4xfn by Molmil
Structure of an Amyloid forming peptide AEVVFT from Human Transthyretin
分子名称: Amyloid forming peptide AEVVFT
著者Saelices, L, Sawaya, M, Cascio, D, Eisenberg, D.S.
登録日2014-12-27
公開日2015-10-21
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Uncovering the Mechanism of Aggregation of Human Transthyretin.
J.Biol.Chem., 290, 2015
7DQK
DownloadVisualize
BU of 7dqk by Molmil
A nicotine MATE transporter, Nicotiana tabacum MATE2 (NtMATE2)
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Tanaka, Y, Tsukazaki, T, Sasaki, A, Iwaki, S.
登録日2020-12-24
公開日2021-06-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Crystal structures of a nicotine MATE transporter provide insight into its mechanism of substrate transport.
Febs Lett., 595, 2021
7X4B
DownloadVisualize
BU of 7x4b by Molmil
Crystal Structure of An Anti-CRISPR Protein
分子名称: Anti-CRISPR protein (AcrIIC1), SULFATE ION
著者Hu, J, Zhang, S, Gao, J.Y, Liu, X, Liu, J.
登録日2022-03-02
公開日2022-10-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献A redox switch regulates the assembly and anti-CRISPR activity of AcrIIC1.
Nat Commun, 13, 2022
7PFO
DownloadVisualize
BU of 7pfo by Molmil
Core human replisome
分子名称: Cell division control protein 45 homolog, Claspin, DNA polymerase epsilon catalytic subunit A, ...
著者Jones, M.J, Yeeles, J.T.P.
登録日2021-08-11
公開日2021-11-10
最終更新日2023-10-18
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structure of a human replisome shows the organisation and interactions of a DNA replication machine.
Embo J., 40, 2021
7DDE
DownloadVisualize
BU of 7dde by Molmil
Cryo-EM structure of the Ape4 and Nbr1 complex
分子名称: Aspartyl aminopeptidase 1,ZZ-type zinc finger-containing protein P35G2.11c,Maltose/maltodextrin-binding periplasmic protein, ZINC ION
著者Zhang, J, Ye, K.
登録日2020-10-28
公開日2021-07-14
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.26 Å)
主引用文献Molecular and structural mechanisms of ZZ domain-mediated cargo selection by Nbr1.
Embo J., 40, 2021
7DD9
DownloadVisualize
BU of 7dd9 by Molmil
Cryo-EM structure of the Ams1 and Nbr1 complex
分子名称: Alpha-mannosidase,ZZ-type zinc finger-containing protein P35G2.11c,Maltose/maltodextrin-binding periplasmic protein, ZINC ION
著者Zhang, J, Ye, K.
登録日2020-10-28
公開日2021-07-14
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Molecular and structural mechanisms of ZZ domain-mediated cargo selection by Nbr1.
Embo J., 40, 2021
7XQ5
DownloadVisualize
BU of 7xq5 by Molmil
Crystal structure of ScIno2p-ScIno4p bound promoter DNA
分子名称: DNA (5'-D(*GP*AP*TP*TP*TP*TP*CP*AP*CP*AP*TP*GP*CP*AP*G)-3'), DNA (5'-D(P*CP*CP*TP*GP*CP*AP*TP*GP*TP*GP*AP*AP*AP*AP*T)-3'), HEXANE-1,6-DIOL, ...
著者Khan, M.H, Lu, X.
登録日2022-05-06
公開日2022-07-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural Analysis of Ino2p/Ino4p Mutual Interactions and Their Binding Interface with Promoter DNA.
Int J Mol Sci, 23, 2022
7UG9
DownloadVisualize
BU of 7ug9 by Molmil
Crystal structure of RNase AM PHP domain
分子名称: 5'-3' exoribonuclease, MANGANESE (II) ION, SULFATE ION
著者Doamekpor, S.K, Tong, L.
登録日2022-03-24
公開日2022-08-31
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Identification of a novel deFADding activity in human, yeast and bacterial 5' to 3' exoribonucleases.
Nucleic Acids Res., 50, 2022
7UOF
DownloadVisualize
BU of 7uof by Molmil
Dihydroorotase from M. jannaschii
分子名称: Dihydroorotase, ZINC ION
著者Vitali, J, Nix, J.C, Newman, H.E, Colaneri, M.J.
登録日2022-04-12
公開日2022-08-31
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of Methanococcus jannaschii dihydroorotase.
Proteins, 91, 2023
2XVV
DownloadVisualize
BU of 2xvv by Molmil
Human serum albumin complexed with dansyl-L-asparagine and myristic acid
分子名称: DANSYL-L-ASPARAGINE, MYRISTIC ACID, SERUM ALBUMIN
著者Ghuman, J, Curry, S.
登録日2010-10-28
公開日2010-11-10
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural Basis of Binding of Fluorescent, Site-Specific Dansylated Amino Acids to Human Serum Albumin.
J.Struct.Biol., 174, 2011
7UMV
DownloadVisualize
BU of 7umv by Molmil
Structure of MAP kinase phosphatase 5 in complex with 3,3-dimethyl-1-((5,6-dihydropyrido[2,3-h]quinazolin-2-yl)thio)butan-2-one, an allosteric inhibitor
分子名称: 1-{[(10aP)-5,6-dihydropyrido[2,3-h]quinazolin-2-yl]sulfanyl}-3,3-dimethylbutan-2-one, ACETATE ION, Dual specificity protein phosphatase 10
著者Gannam, Z.T.K, Jamali, H, Lolis, E, Anderson, K.S, Ellman, J.A, Bennett, A.M.
登録日2022-04-07
公開日2022-10-05
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Defining the structure-activity relationship for a novel class of allosteric MKP5 inhibitors.
Eur.J.Med.Chem., 243, 2022
7UN0
DownloadVisualize
BU of 7un0 by Molmil
Structure of MAP kinase phosphatase 5 in complex with 3,3-dimethyl-1-((9-chloro-5,6-dihydrobenzo[h]quinazolin-2-yl)thio)butan-2-one, an allosteric inhibitor
分子名称: 1-[(9-chlorobenzo[h]quinazolin-2-yl)sulfanyl]-3,3-dimethylbutan-2-one, Dual specificity protein phosphatase 10
著者Gannam, Z.T.K, Jamali, H, Lolis, E, Anderson, K.S, Ellman, J.A, Bennett, A.M.
登録日2022-04-08
公開日2022-10-05
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Defining the structure-activity relationship for a novel class of allosteric MKP5 inhibitors.
Eur.J.Med.Chem., 243, 2022
7UN4
DownloadVisualize
BU of 7un4 by Molmil
Structure of MAP kinase phosphatase 5 in complex with 3,3-dimethyl-1-((9-propyl-5,6-dihydrothieno[3,4-h]quinazolin-2-yl)thio)butan-2-one, an allosteric inhibitor
分子名称: 1-{[(9aM)-5,6-dihydrothieno[2,3-h]quinazolin-2-yl]sulfanyl}-3,3-dimethylbutan-2-one, Dual specificity protein phosphatase 10
著者Gannam, Z.T.K, Jamali, H, Lolis, E, Anderson, K.S, Ellman, J.A, Bennett, A.M.
登録日2022-04-08
公開日2022-10-05
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Defining the structure-activity relationship for a novel class of allosteric MKP5 inhibitors.
Eur.J.Med.Chem., 243, 2022
7B1D
DownloadVisualize
BU of 7b1d by Molmil
Cryo-EM of Aedes Aegypti Toll5A
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Toll-like receptor
著者Gangloff, M, Hardwick, S.W, Chirgadze, D.Y.
登録日2020-11-24
公開日2022-07-13
最終更新日2023-01-25
実験手法ELECTRON MICROSCOPY (3.41 Å)
主引用文献Structure and dynamics of Toll immunoreceptor activation in the mosquito Aedes aegypti.
Nat Commun, 13, 2022
7B1C
DownloadVisualize
BU of 7b1c by Molmil
Cryo-EM of Aedes Aegypti Toll5A trimer bound to Spz1C
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, AAEL013433-PA, ...
著者Gangloff, M, Hardwick, S.W, Chirgadze, D.Y.
登録日2020-11-24
公開日2022-07-13
最終更新日2023-01-25
実験手法ELECTRON MICROSCOPY (3.74 Å)
主引用文献Structure and dynamics of Toll immunoreceptor activation in the mosquito Aedes aegypti.
Nat Commun, 13, 2022
7B1B
DownloadVisualize
BU of 7b1b by Molmil
Cryo-EM of Aedes Aegypti Toll5A dimer bound to Spz1C
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, AAEL013433-PA, ...
著者Gangloff, M, Hardwick, S.W, Chirgadze, D.Y.
登録日2020-11-24
公開日2022-07-13
最終更新日2023-01-25
実験手法ELECTRON MICROSCOPY (4.23 Å)
主引用文献Structure and dynamics of Toll immunoreceptor activation in the mosquito Aedes aegypti.
Nat Commun, 13, 2022
7V9E
DownloadVisualize
BU of 7v9e by Molmil
Crystal structure of a methyl transferase ribozyme
分子名称: BARIUM ION, GUANINE, RNA (68-MER), ...
著者Deng, J, Lilley, D.M.J, Huang, L.
登録日2021-08-25
公開日2022-03-23
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure and mechanism of a methyltransferase ribozyme.
Nat.Chem.Biol., 18, 2022

225158

件を2024-09-18に公開中

PDB statisticsPDBj update infoContact PDBjnumon