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2RSY
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Solution structure of the SH2 domain of Csk in complex with a phosphopeptide from Cbp
分子名称: Phosphoprotein associated with glycosphingolipid-enriched microdomains 1, Tyrosine-protein kinase CSK
著者Tanaka, H, Akagi, K, Oneyama, C, Tanaka, M, Sasaki, Y, Kanou, T, Lee, Y, Yokogawa, D, Debenecker, M, Nakagawa, A, Okada, M, Ikegami, T.
登録日2012-09-10
公開日2013-04-10
最終更新日2019-12-25
実験手法SOLUTION NMR
主引用文献Identification of a new interaction mode between the Src homology 2 domain of C-terminal Src kinase (Csk) and Csk-binding protein/phosphoprotein associated with glycosphingolipid microdomains.
J.Biol.Chem., 288, 2013
2RIW
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The Reactive loop cleaved human Thyroxine Binding Globulin complexed with thyroxine
分子名称: 3,5,3',5'-TETRAIODO-L-THYRONINE, Thyroxine-binding globulin
著者Zhou, A, Wei, Z, Stanley, P.L.D, Read, R.J, Stein, P.E, Carrell, R.W.
登録日2007-10-12
公開日2008-10-14
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Allosteric modulation of hormone release from thyroxine and corticosteroid-binding globulins
J.Biol.Chem., 286, 2011
2TGI
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CRYSTAL STRUCTURE OF TRANSFORMING GROWTH FACTOR-BETA2: AN UNUSUAL FOLD FOR THE SUPERFAMILY
分子名称: TRANSFORMING GROWTH FACTOR ,BETA 2
著者Daopin, S, Davies, D.R.
登録日1993-10-20
公開日1994-01-31
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of transforming growth factor-beta 2: an unusual fold for the superfamily.
Science, 257, 1992
2RMP
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RMP-pepstatin A complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, MUCOROPEPSIN, PEPSTATIN, ...
著者Yang, J, Quail, J.W.
登録日1997-05-30
公開日1997-09-17
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure of the Rhizomucor miehei aspartic proteinase complexed with the inhibitor pepstatin A at 2.7 A resolution.
Acta Crystallogr.,Sect.D, 55, 1999
2RMX
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Solution structure of the SHP-1 C-terminal SH2 domain complexed with a tyrosine-phosphorylated peptide from NKG2A
分子名称: NKG2-A/NKG2-B type II integral membrane protein, Tyrosine-protein phosphatase non-receptor type 6
著者Kasai, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-11-30
公開日2008-12-02
最終更新日2022-03-16
実験手法SOLUTION NMR
主引用文献Structural basis for the recognition of the two NKG2A immunoreceptor tyrosine-based inhibitory motifs (ITIMs) by the C-terminal SH2 domain of protein tyrosine phosphatase SHP-1
To be Published
2TIR
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CRYSTAL STRUCTURE ANALYSIS OF A MUTANT ESCHERICHIA COLI THIOREDOXIN IN WHICH LYSINE 36 IS REPLACED BY GLUTAMIC ACID
分子名称: COPPER (II) ION, THIOREDOXIN
著者Nikkola, M, Gleason, F.K, Fuchs, J.A, Eklund, H.
登録日1993-01-10
公開日1993-10-31
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure analysis of a mutant Escherichia coli thioredoxin in which lysine 36 is replaced by glutamic acid.
Biochemistry, 32, 1993
2RS2
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1H, 13C, and 15N Chemical Shift Assignments for Musashi1 RBD1:r(GUAGU) complex
分子名称: RNA (5'-R(*GP*UP*AP*GP*U)-3'), RNA-binding protein Musashi homolog 1
著者Ohyama, T, Nagata, T, Tsuda, K, Imai, T, Okano, H, Yamazaki, T, Katahira, M.
登録日2011-06-27
公開日2011-12-28
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure of Musashi1 in a complex with target RNA: the role of aromatic stacking interactions
Nucleic Acids Res., 2011
2RDL
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Hamster Chymase 2
分子名称: Chymase 2, METHOXYSUCCINYL-ALA-ALA-PRO-ALA-CHLOROMETHYLKETONE INHIBITOR, SULFATE ION
著者Spurlino, J, Abad, M, Kervinen, J.
登録日2007-09-24
公開日2007-10-30
最終更新日2012-12-12
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis for elastolytic substrate specificity in rodent alpha-chymases.
J.Biol.Chem., 283, 2008
7VGP
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Hen egg lysozyme refolded after denaturation at acidic pH
分子名称: Lysozyme C, SODIUM ION
著者Oda, M, Ikura, T, Ito, N.
登録日2021-09-17
公開日2022-02-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Structural Analysis of Hen Egg Lysozyme Refolded after Denaturation at Acidic pH.
Protein J., 41, 2022
7VGO
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Hen egg lysozyme
分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION
著者Oda, M, Ikura, T, Ito, N.
登録日2021-09-17
公開日2022-02-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Structural Analysis of Hen Egg Lysozyme Refolded after Denaturation at Acidic pH.
Protein J., 41, 2022
2ROT
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Structure of chimeric variant of SH3 domain- SHH
分子名称: Spectrin alpha chain, brain
著者Kutyshenko, N.P, Prokhorov, D.A, Timchenko, M.A, Kudrevatykh, Y.A, Gushchina, L.V, Khristoforov, V.S, Filimonov, V.V.
登録日2008-04-10
公開日2009-04-28
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure and dynamics of the chimeric SH3 domains, SHH- and SHA-"Bergeracs".
Biochim.Biophys.Acta, 1794, 2009
7VSA
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E. coli Ribonuclease HI in complex with two Mg2+
分子名称: GLYCEROL, MAGNESIUM ION, Ribonuclease HI, ...
著者Liao, Z, Oyama, T.
登録日2021-10-26
公開日2022-03-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Pivotal role of a conserved histidine in Escherichia coli ribonuclease HI as proposed by X-ray crystallography.
Acta Crystallogr D Struct Biol, 78, 2022
7VSB
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E. coli Ribonuclease HI in complex with one Zn2+ (His124 N-delta binding)
分子名称: Ribonuclease HI, ZINC ION
著者Liao, Z, Oyama, T.
登録日2021-10-26
公開日2022-03-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Pivotal role of a conserved histidine in Escherichia coli ribonuclease HI as proposed by X-ray crystallography.
Acta Crystallogr D Struct Biol, 78, 2022
2RKG
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HIV-1 PR resistant mutant + LPV
分子名称: GLYCEROL, N-{1-BENZYL-4-[2-(2,6-DIMETHYL-PHENOXY)-ACETYLAMINO]-3-HYDROXY-5-PHENYL-PENTYL}-3-METHYL-2-(2-OXO-TETRAHYDRO-PYRIMIDIN-1-YL)-BUTYRAMIDE, PROTEASE RETROPEPSIN
著者Rezacova, P, Brynda, J, Kozisek, M, Saskova, K, Konvalinka, J.
登録日2007-10-16
公開日2008-08-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Ninety-nine is not enough: molecular characterization of inhibitor-resistant human immunodeficiency virus type 1 protease mutants with insertions in the flap region
J.Virol., 82, 2008
7VSC
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E. coli Ribonuclease HI in complex with one Mg2+ (1)
分子名称: MAGNESIUM ION, Ribonuclease HI, SULFATE ION
著者Liao, Z, Oyama, T.
登録日2021-10-26
公開日2022-03-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Pivotal role of a conserved histidine in Escherichia coli ribonuclease HI as proposed by X-ray crystallography.
Acta Crystallogr D Struct Biol, 78, 2022
2RGB
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BU of 2rgb by Molmil
Crystal structure of H-RasQ61K-GppNHp
分子名称: CALCIUM ION, GTPase HRas, MAGNESIUM ION, ...
著者Buhrman, G, Wink, G, Mattos, C.
登録日2007-10-03
公開日2007-12-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Transformation Efficiency of RasQ61 Mutants Linked to Structural Features of the Switch Regions in the Presence of Raf.
Structure, 15, 2007
2RGG
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Crystal structure of H-RasQ61I-GppNHp, trigonal crystal form
分子名称: GTPase HRas, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
著者Buhrman, G, Wink, G, Mattos, C.
登録日2007-10-03
公開日2007-12-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Transformation Efficiency of RasQ61 Mutants Linked to Structural Features of the Switch Regions in the Presence of Raf.
Structure, 15, 2007
7VSD
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E. coli Ribonuclease HI in complex with one Mg2+ (2)
分子名称: MAGNESIUM ION, Ribonuclease HI, SULFATE ION
著者Liao, Z, Oyama, T.
登録日2021-10-26
公開日2022-03-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Pivotal role of a conserved histidine in Escherichia coli ribonuclease HI as proposed by X-ray crystallography.
Acta Crystallogr D Struct Biol, 78, 2022
7VSE
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E. coli Ribonuclease HI in complex one Zn2+ (His124 N-epsilon binding)
分子名称: GLYCEROL, Ribonuclease HI, SULFATE ION, ...
著者Liao, Z, Oyama, T.
登録日2021-10-26
公開日2022-03-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Pivotal role of a conserved histidine in Escherichia coli ribonuclease HI as proposed by X-ray crystallography.
Acta Crystallogr D Struct Biol, 78, 2022
2RPN
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A crucial role for high intrinsic specificity in the function of yeast SH3 domains
分子名称: Actin-binding protein, Actin-regulating kinase 1
著者Stollar, E.J, Garcia, B, Chong, A, Forman-Kay, J, Davidson, A.
登録日2008-06-12
公開日2009-06-16
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structural, functional, and bioinformatic studies demonstrate the crucial role of an extended peptide binding site for the SH3 domain of yeast Abp1p
J.Biol.Chem., 284, 2009
2RQ4
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Refinement of RNA binding domain 3 in CUG triplet repeat RNA-binding protein 1
分子名称: CUG-BP- and ETR-3-like factor 1
著者Tsuda, K, Kuwasako, K, Takahashi, M, Someya, T, Inoue, M, Terada, T, Kobayashi, N, Shirouzu, M, Kigawa, T, Guntert, P, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-01-19
公開日2009-08-04
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structural basis for the sequence-specific RNA-recognition mechanism of human CUG-BP1 RRM3
Nucleic Acids Res., 2009
2RUT
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Solution structures of the DNA-binding domain (ZF2) of immune-related zinc-finger protein ZFAT
分子名称: ZINC ION, Zinc finger protein ZFAT
著者Tochio, N, Umehara, T, Kigawa, T, Yokoyama, S.
登録日2015-01-26
公開日2015-04-08
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structures of the DNA-binding domains of immune-related zinc-finger protein ZFAT.
J Struct Funct Genomics, 16, 2015
2ULL
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MULTIPLE CONFORMATION STRUCTURE OF ALPHA-LYTIC PROTEASE AT 120 K
分子名称: ALPHA-LYTIC PROTEASE, SULFATE ION, TRIS(HYDROXYETHYL)AMINOMETHANE
著者Rader, S.D, Agard, D.A.
登録日1996-11-26
公開日1997-07-07
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Conformational substates in enzyme mechanism: the 120 K structure of alpha-lytic protease at 1.5 A resolution.
Protein Sci., 6, 1997
2UP1
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STRUCTURE OF UP1-TELOMERIC DNA COMPLEX
分子名称: DNA (5'-D(P*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3'), PROTEIN (HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN A1)
著者Ding, J, Hayashi, M.K, Krainer, A.R, Xu, R.-M.
登録日1998-07-10
公開日1999-11-10
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of the two-RRM domain of hnRNP A1 (UP1) complexed with single-stranded telomeric DNA.
Genes Dev., 13, 1999
7VLE
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Oxy-deoxy intermediate of V2 hemoglobin at 55% oxygen saturation
分子名称: Extracellular A1 globin, Extracellular A2 globin, Extracellular B1 globin, ...
著者Numoto, N, Onoda, S, Kawano, Y, Okumura, H, Baba, S, Fukumori, Y, Miki, K, Ito, N.
登録日2021-10-02
公開日2022-05-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structures of oxygen dissociation intermediates of 400 kDa V2 hemoglobin provide coarse snapshots of the protein allostery.
Biophys Physicobio., 19, 2022

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