Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8SLT
DownloadVisualize
BU of 8slt by Molmil
Crystal structure of human STEP (PTPN5) at physiological temperature (310 K) and ambient pressure (0.1 MPa)
分子名称: SULFATE ION, Tyrosine-protein phosphatase non-receptor type 5
著者Ebrahim, A, Guerrero, L, Riley, B.T, Kim, M, Huang, Q, Finke, A.D, Keedy, D.A.
登録日2023-04-24
公開日2023-06-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Pushed to extremes: distinct effects of high temperature vs. pressure on the structure of an atypical phosphatase.
Biorxiv, 2023
8SLS
DownloadVisualize
BU of 8sls by Molmil
Crystal structure of human STEP (PTPN5) at cryogenic temperature (100 K) and ambient pressure (0.1 MPa)
分子名称: GLYCEROL, SULFATE ION, Tyrosine-protein phosphatase non-receptor type 5
著者Ebrahim, A, Guerrero, L, Riley, B.T, Kim, M, Huang, Q, Finke, A.D, Keedy, D.A.
登録日2023-04-24
公開日2023-06-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Pushed to extremes: distinct effects of high temperature vs. pressure on the structure of an atypical phosphatase.
Biorxiv, 2023
8SLQ
DownloadVisualize
BU of 8slq by Molmil
Cryo-EM structure of the rat TRPM5 channel in 2mM calcium, high-3
分子名称: Transient receptor potential cation channel subfamily M member 5
著者Karuppan, S, Schrag, L.G, Jara-Oseguera, A, Zubcevic, L.
登録日2023-04-24
公開日2024-07-03
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Structural dynamics at cytosolic interprotomer interfaces control gating of a mammalian TRPM5 channel.
Proc.Natl.Acad.Sci.USA, 121, 2024
8SLP
DownloadVisualize
BU of 8slp by Molmil
Cryo-EM structure of the rat TRPM5 channel in 2mM calcium, high-2
分子名称: CALCIUM ION, Transient receptor potential cation channel subfamily M member 5
著者Karuppan, S, Schrag, L.G, Jara-Oseguera, A, Zubcevic, L.
登録日2023-04-24
公開日2024-07-03
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structural dynamics at cytosolic interprotomer interfaces control gating of a mammalian TRPM5 channel.
Proc.Natl.Acad.Sci.USA, 121, 2024
8SLO
DownloadVisualize
BU of 8slo by Molmil
Plasmodium falciparum M1 aminopeptidase bound to selective inhibitor MIPS2673
分子名称: 2-hydroxy-N-[(1R)-2-(hydroxyamino)-2-oxo-1-(3',4',5'-trifluoro[1,1'-biphenyl]-4-yl)ethyl]-2-methylpropanamide, GLYCEROL, M1 family aminopeptidase, ...
著者McGowan, S.M, Drinkwater, N.
登録日2023-04-24
公開日2024-04-03
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Chemoproteomics validates selective targeting of Plasmodium M1 alanyl aminopeptidase as a cross-species strategy to treat malaria
Elife, 2024
8SLJ
DownloadVisualize
BU of 8slj by Molmil
K164A mutant of a chlorogenic acid esterase from Lactobacillus helveticus
分子名称: Alpha/beta hydrolase
著者Owens, C.P, Omori, K.K.
登録日2023-04-22
公開日2024-03-27
実験手法X-RAY DIFFRACTION (2.101 Å)
主引用文献The structure of a Lactobacillus helveticus chlorogenic acid esterase and the dynamics of its insertion domain provide insights into substrate binding.
Febs Lett., 597, 2023
8SLI
DownloadVisualize
BU of 8sli by Molmil
Cryo-EM structure of the rat TRPM5 channel in 2mM calcium, high-1
分子名称: CALCIUM ION, Transient receptor potential cation channel subfamily M member 5
著者Karuppan, S, Schrag, L.G, Jara-Oseguera, A, Zubcevic, L.
登録日2023-04-21
公開日2024-07-03
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (4.9 Å)
主引用文献Structural dynamics at cytosolic interprotomer interfaces control gating of a mammalian TRPM5 channel.
Proc.Natl.Acad.Sci.USA, 121, 2024
8SLG
DownloadVisualize
BU of 8slg by Molmil
Crystal Structure of Glycine tRNA ligase from Mycobacterium thermoresistibile (glycyl adenylate bound)
分子名称: 5'-O-(glycylsulfamoyl)adenosine, GLYCEROL, Glycine--tRNA ligase, ...
著者Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2023-04-21
公開日2023-05-03
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal Structure of Glycine tRNA ligase from Mycobacterium thermoresistibile (glycyl adenylate bound)
To be published
8SLE
DownloadVisualize
BU of 8sle by Molmil
Cryo-EM structure of the rat TRPM5 channel in trace calcium, trace-3
分子名称: Transient receptor potential cation channel subfamily M member 5
著者Karuppan, S, Schrag, L.G, Jara-Oseguera, A, Zubcevic, L.
登録日2023-04-21
公開日2024-07-03
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Structural dynamics at cytosolic interprotomer interfaces control gating of a mammalian TRPM5 channel.
Proc.Natl.Acad.Sci.USA, 121, 2024
8SLC
DownloadVisualize
BU of 8slc by Molmil
High Affinity nanobodies against GFP
分子名称: CHLORIDE ION, GLYCEROL, Green fluorescent protein, ...
著者Ketaren, N.E, Rout, M.P, Bonanno, J.B, Almo, S.C.
登録日2023-04-21
公開日2024-05-22
実験手法X-RAY DIFFRACTION (2.97 Å)
主引用文献High Affinity nanobodies against GFP
To Be Published
8SLB
DownloadVisualize
BU of 8slb by Molmil
X-ray structure of CorA N-terminal domain in complex with conformation-specific synthetic antibody C12
分子名称: CHLORIDE ION, Cobalt/magnesium transport protein CorA, sAB C12 Heavy Chain, ...
著者Dominik, P.K, Erramilli, S.K, Reddy, B.G, Kossiakoff, A.A.
登録日2023-04-21
公開日2023-06-07
最終更新日2023-07-26
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Conformation-specific Synthetic Antibodies Discriminate Multiple Functional States of the Ion Channel CorA.
J.Mol.Biol., 435, 2023
8SLA
DownloadVisualize
BU of 8sla by Molmil
Cryo-EM structure of the rat TRPM5 channel in trace calcium, trace-2
分子名称: Transient receptor potential cation channel subfamily M member 5
著者Karuppan, S, Schrag, L.G, Jara-Oseguera, A, Zubcevic, L.
登録日2023-04-21
公開日2024-07-03
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural dynamics at cytosolic interprotomer interfaces control gating of a mammalian TRPM5 channel.
Proc.Natl.Acad.Sci.USA, 121, 2024
8SL8
DownloadVisualize
BU of 8sl8 by Molmil
Cryo-EM structure of the rat TRPM5 channel in trace calcium, trace-1
分子名称: Transient receptor potential cation channel subfamily M member 5
著者Karuppan, S, Schrag, L.G, Jara-Oseguera, A, Zubcevic, L.
登録日2023-04-21
公開日2024-07-03
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structural dynamics at cytosolic interprotomer interfaces control gating of a mammalian TRPM5 channel.
Proc.Natl.Acad.Sci.USA, 121, 2024
8SL7
DownloadVisualize
BU of 8sl7 by Molmil
Butyricicoccus sp. BIOML-A1 tryptophanase complex with (3S) ALG-05
分子名称: (E)-3-[(3S)-3-chloro-2-oxo-2,3-dihydro-1H-indol-3-yl]-N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-alanine, Tryptophanase
著者Graboski, A.L, Redinbo, M.R.
登録日2023-04-21
公開日2023-08-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Mechanism-based inhibition of gut microbial tryptophanases reduces serum indoxyl sulfate.
Cell Chem Biol, 30, 2023
8SL6
DownloadVisualize
BU of 8sl6 by Molmil
Cryo-EM structure of the rat TRPM5 channel in EGTA
分子名称: Transient receptor potential cation channel subfamily M member 5
著者Karuppan, S, Schrag, L.G, Jara-Oseguera, A, Zubcevic, L.
登録日2023-04-21
公開日2024-07-03
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Structural dynamics at cytosolic interprotomer interfaces control gating of a mammalian TRPM5 channel.
Proc.Natl.Acad.Sci.USA, 121, 2024
8SL0
DownloadVisualize
BU of 8sl0 by Molmil
Structure of a bacterial gasdermin slinky-like oligomer
分子名称: Gasdermin bGSDM
著者Johnson, A.G, Mayer, M.L, Kranzusch, P.J.
登録日2023-04-20
公開日2023-05-17
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structure and assembly of a bacterial gasdermin pore.
Nature, 628, 2024
8SKN
DownloadVisualize
BU of 8skn by Molmil
Crystal structure of compound 3-bound human Dynamin-1-like protein GTPase-BSE fusion
分子名称: 1,2-ETHANEDIOL, Dynamin-1-like protein GTPase-BSE fusion, N-[4-(azetidin-1-yl)-2-(4-methylphenyl)quinolin-6-yl]-2-methylpropanamide
著者Ma, B.
登録日2023-04-20
公開日2023-08-30
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献Discovery of Potent Allosteric DRP1 Inhibitors by Disrupting Protein-Protein Interaction with MiD49.
Acs Med.Chem.Lett., 14, 2023
8SKM
DownloadVisualize
BU of 8skm by Molmil
Wild type chlorogenic acid esterase from Lactobacillus helveticus
分子名称: Chlorogenic acid esterase
著者Owens, C.P, Okumura, T.L.S.
登録日2023-04-20
公開日2024-03-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The structure of a Lactobacillus helveticus chlorogenic acid esterase and the dynamics of its insertion domain provide insights into substrate binding.
Febs Lett., 597, 2023
8SKJ
DownloadVisualize
BU of 8skj by Molmil
Crystal structure of a Nanobody bound to the V5 peptide.
分子名称: NbA1, V5 Epitope Tag Peptide
著者Zaghal, M, Matte, K, Venes, A, Patel, S, Laroche, G, Sarvan, S, Joshi, M, Couture, J.F, Giguere, P.M.
登録日2023-04-19
公開日2023-11-22
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Development of a V5-tag-directed nanobody and its implementation as an intracellular biosensor of GPCR signaling.
J.Biol.Chem., 299, 2023
8SKH
DownloadVisualize
BU of 8skh by Molmil
Co-structure of SARS-CoV-2 (COVID-19 with covalent pyrazoline based inhibitors
分子名称: 2-chloro-1-[(4R,5R)-3,4,5-triphenyl-4,5-dihydro-1H-pyrazol-1-yl]ethan-1-one, 3C-like proteinase nsp5
著者Knapp, M.S, Ornelas, E.
登録日2023-04-19
公開日2023-06-07
最終更新日2023-06-14
実験手法X-RAY DIFFRACTION (1.882 Å)
主引用文献Discovery of Potent Pyrazoline-Based Covalent SARS-CoV-2 Main Protease Inhibitors.
Chembiochem, 24, 2023
8SKF
DownloadVisualize
BU of 8skf by Molmil
Crystal Structure of Betaine aldehyde dehydrogenase (BetB) from Klebsiella aerogenes (Lattice Translocation Disorder)
分子名称: Betaine aldehyde dehydrogenase, CALCIUM ION, GLYCEROL, ...
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2023-04-19
公開日2023-04-26
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of Betaine aldehyde dehydrogenase (BetB) from Klebsiella aerogenes (Lattice Translocation Disorder)
To be published
8SK5
DownloadVisualize
BU of 8sk5 by Molmil
Crystal structure of the SARS-CoV-2 neutralizing VHH 7A9 bound to the spike receptor binding domain
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1, anti-SARS-CoV-2 receptor binding domain VHH
著者Noland, C.L, Pande, K, Zhang, L, Zhou, H, Galli, J, Eddins, M, Gomez-Llorente, Y.
登録日2023-04-18
公開日2023-08-16
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.011 Å)
主引用文献Discovery and multimerization of cross-reactive single-domain antibodies against SARS-like viruses to enhance potency and address emerging SARS-CoV-2 variants.
Sci Rep, 13, 2023
8SK4
DownloadVisualize
BU of 8sk4 by Molmil
Co-structure of SARS-CoV-2 (COVID-19 with covalent pyrazoline based inhibitors)
分子名称: 2-chloro-1-[(5R)-3-phenyl-5-(quinoxalin-5-yl)-4,5-dihydro-1H-pyrazol-1-yl]ethan-1-one, 3C-like proteinase nsp5, IMIDAZOLE
著者Knapp, M.S, Ornelas, E.
登録日2023-04-18
公開日2023-06-07
最終更新日2023-06-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Discovery of Potent Pyrazoline-Based Covalent SARS-CoV-2 Main Protease Inhibitors.
Chembiochem, 2023
8SK0
DownloadVisualize
BU of 8sk0 by Molmil
Crystal structure of EvdS6 decarboxylase in ligand bound state
分子名称: CITRATE ANION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Sharma, P, Frigo, L, Dulin, C.C, Bachmann, B.O, Iverson, T.M.
登録日2023-04-18
公開日2023-08-09
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献EvdS6 is a bifunctional decarboxylase from the everninomicin gene cluster.
J.Biol.Chem., 299, 2023
8SJK
DownloadVisualize
BU of 8sjk by Molmil
Pembrolizumab Caffeine crystal
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ANTIBODY HEAVY CHAIN, ANTIBODY LIGHT CHAIN, ...
著者Larpent, P, Codan, L, Bothe, J.R, Stueber, D, Reichert, P, Fischmann, T, Su, Y, Pabit, S, Gupta, S, Iuzzolino, L, Cote, A.
登録日2023-04-18
公開日2024-04-24
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献Smaall angle X-ray scattering as powerful toolsfor phase and crystallinity assessment of monoclonal antibodies crystallites in support of batch crystallization and processing
To Be Published

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon