Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4J8X
DownloadVisualize
BU of 4j8x by Molmil
X-ray structure of NCP145 with bound chlorido(eta-6-p-cymene)(N-fluorophenyl-2-pyridinecarbothioamide)ruthenium(II)
分子名称: DNA, Histone H2A, Histone H2B 1.1, ...
著者Adhireksan, Z, Davey, C.A.
登録日2013-02-15
公開日2013-05-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.87 Å)
主引用文献Novel metal(II) arene 2-pyridinecarbothioamides: a rationale to orally active organometallic anticancer agents
CHEM SCI, 4, 2013
5GSU
DownloadVisualize
BU of 5gsu by Molmil
Crystal structure of nucleosome core particle consisting of human testis-specific histone variants, Th2A and Th2B
分子名称: CHLORIDE ION, DNA (146-MER), Histone H2A type 1-A, ...
著者Kumarevel, T, Sivaraman, P.
登録日2016-08-17
公開日2017-02-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural analyses of the nucleosome complexes with human testis-specific histone variants, hTh2a and hTh2b
Biophys. Chem., 221, 2017
7ZSB
DownloadVisualize
BU of 7zsb by Molmil
Yeast RNA polymerase II transcription pre-initiation complex with the +1 nucleosome and NTP, complex C
分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
著者Wang, H, Cramer, P.
登録日2022-05-06
公開日2022-11-16
最終更新日2023-03-01
実験手法ELECTRON MICROSCOPY (6.6 Å)
主引用文献Structures of transcription preinitiation complex engaged with the +1 nucleosome.
Nat.Struct.Mol.Biol., 30, 2023
5GXQ
DownloadVisualize
BU of 5gxq by Molmil
The crystal structure of the nucleosome containing H3.6
分子名称: DNA (146-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
著者Taguchi, H, Xie, Y, Horikoshi, N, Kurumizaka, H.
登録日2016-09-19
公開日2017-04-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Crystal Structure and Characterization of Novel Human Histone H3 Variants, H3.6, H3.7, and H3.8
Biochemistry, 56, 2017
7ZSA
DownloadVisualize
BU of 7zsa by Molmil
Yeast RNA polymerase II transcription pre-initiation complex with the +1 nucleosome and NTP (complex B)
分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
著者Wang, H, Cramer, P.
登録日2022-05-06
公開日2022-11-16
最終更新日2023-03-01
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structures of transcription preinitiation complex engaged with the +1 nucleosome.
Nat.Struct.Mol.Biol., 30, 2023
7ZS9
DownloadVisualize
BU of 7zs9 by Molmil
Yeast RNA polymerase II transcription pre-initiation complex with the +1 nucleosome (complex A)
分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
著者Wang, H, Cramer, P.
登録日2022-05-06
公開日2022-11-16
最終更新日2023-03-01
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structures of transcription preinitiation complex engaged with the +1 nucleosome.
Nat.Struct.Mol.Biol., 30, 2023
4J8U
DownloadVisualize
BU of 4j8u by Molmil
X-ray structure of NCP145 with chlorido(eta-6-p-cymene)(N-phenyl-2-pyridinecarbothioamide)osmium(II)
分子名称: DNA, Histone H2A type 1, Histone H2B 1.1, ...
著者Adhireksan, Z, Davey, C.A.
登録日2013-02-15
公開日2013-04-17
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Novel metal(II) arene 2-pyridinecarbothioamides: a rationale to orally active organometallic anticancer agents
CHEM SCI, 4, 2013
5GSE
DownloadVisualize
BU of 5gse by Molmil
Crystal structure of unusual nucleosome
分子名称: DNA (250-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
著者Kato, D, Osakabe, A, Arimura, Y, Park, S.Y, Kurumizaka, H.
登録日2016-08-16
公開日2017-05-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.14 Å)
主引用文献Crystal structure of the overlapping dinucleosome composed of hexasome and octasome
Science, 356, 2017
5GTC
DownloadVisualize
BU of 5gtc by Molmil
Crystal structure of complex between DMAP-SH conjugated with a Kaposi's sarcoma herpesvirus LANA peptide (5-15) and nucleosome core particle
分子名称: CHLORIDE ION, DNA (146-MER), Histone H2A type 1-B/E, ...
著者Arimura, Y, Kato, D, Suto, H, Kurumizaka, H, Kawashima, S.A, Yamatsugu, K, Kanai, M.
登録日2016-08-19
公開日2017-06-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Synthetic Posttranslational Modifications: Chemical Catalyst-Driven Regioselective Histone Acylation of Native Chromatin.
J. Am. Chem. Soc., 139, 2017
6Y36
DownloadVisualize
BU of 6y36 by Molmil
CCAAT-binding complex from Aspergillus fumigatus with cccA DNA
分子名称: CCAAT-binding factor complex subunit HapC, CCAAT-binding factor complex subunit HapE, CCAAT-binding transcription factor subunit HAPB, ...
著者Groll, M, Huber, E.M.
登録日2020-02-17
公開日2020-05-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis of HapE P88L -linked antifungal triazole resistance in Aspergillus fumigatus .
Life Sci Alliance, 3, 2020
6Y5E
DownloadVisualize
BU of 6y5e by Molmil
Structure of human cGAS (K394E) bound to the nucleosome (focused refinement of cGAS-NCP subcomplex)
分子名称: Cyclic GMP-AMP synthase, DNA (153-MER), Histone H2A type 2-C, ...
著者Pathare, G.R, Cavadini, S, Kempf, G, Thoma, N.H.
登録日2020-02-25
公開日2020-09-23
最終更新日2020-12-09
実験手法ELECTRON MICROSCOPY (3.15 Å)
主引用文献Structural mechanism of cGAS inhibition by the nucleosome.
Nature, 587, 2020
5GT3
DownloadVisualize
BU of 5gt3 by Molmil
Crystal structure of nucleosome particle in the presence of human testis-specific histone variant, hTh2b
分子名称: CHLORIDE ION, DNA (146-MER), Histone H2A type 1-D, ...
著者Kumarevel, T, Sivaraman, P.
登録日2016-08-18
公開日2017-02-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献Structural analyses of the nucleosome complexes with human testis-specific histone variants, hTh2a and hTh2b
Biophys. Chem., 221, 2017
6Y35
DownloadVisualize
BU of 6y35 by Molmil
CCAAT-binding complex from Aspergillus fumigatus with cycA DNA
分子名称: CCAAT-binding factor complex subunit HapC, CCAAT-binding factor complex subunit HapE, CCAAT-binding transcription factor subunit HAPB, ...
著者Groll, M, Huber, E.M.
登録日2020-02-17
公開日2020-05-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis of HapE P88L -linked antifungal triazole resistance in Aspergillus fumigatus .
Life Sci Alliance, 3, 2020
6Y5D
DownloadVisualize
BU of 6y5d by Molmil
Structure of human cGAS (K394E) bound to the nucleosome
分子名称: Cyclic GMP-AMP synthase, DNA (153-MER), Histone H2A type 2-A, ...
著者Pathare, G.R, Cavadini, S, Kempf, G, Thoma, N.H.
登録日2020-02-25
公開日2020-09-23
最終更新日2020-12-09
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structural mechanism of cGAS inhibition by the nucleosome.
Nature, 587, 2020
5G2E
DownloadVisualize
BU of 5g2e by Molmil
Structure of the Nap1 H2A H2B complex
分子名称: HISTONE H2A TYPE 1, HISTONE H2B 1.1, NUCLEOSOME ASSEMBLY PROTEIN
著者AguilarGurrieri, C, Larabi, A, Vinayachandran, V, Patel, N.A, Yen, K, Reja, R, Ebong, I.O, Schoehn, G, Robinson, C.V, Pugh, B.F, Panne, D.
登録日2016-04-07
公開日2016-08-03
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (6.7 Å)
主引用文献Structural Evidence for Nap1-Dependent H2A-H2B Deposition and Nucleosome Assembly.
Embo J., 35, 2016
8AAG
DownloadVisualize
BU of 8aag by Molmil
H1-bound palindromic nucleosome, state 1
分子名称: DNA/RNA (185-MER), Histone H1.0-B, Histone H2A type 1, ...
著者Alegrio Louro, J, Beinsteiner, B, Cheng, T.C, Patel, A.K.M, Boopathi, R, Angelov, D, Hamiche, A, Bednar, J, Kale, S, Dimitrov, S, Klaholz, B.
登録日2022-07-01
公開日2022-12-14
最終更新日2023-02-15
実験手法ELECTRON MICROSCOPY (10 Å)
主引用文献Nucleosome dyad determines the H1 C-terminus collapse on distinct DNA arms.
Structure, 31, 2023
8ATF
DownloadVisualize
BU of 8atf by Molmil
Nucleosome-bound Ino80 ATPase
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA (226-MER), DNA (227-MER), ...
著者Kunert, F, Metzner, F.J, Eustermann, S, Jung, J, Woike, S, Schall, K, Kostrewa, D, Hopfner, K.P.
登録日2022-08-23
公開日2022-12-14
最終更新日2022-12-28
実験手法ELECTRON MICROSCOPY (3.45 Å)
主引用文献Structural mechanism of extranucleosomal DNA readout by the INO80 complex.
Sci Adv, 8, 2022
5HQ2
DownloadVisualize
BU of 5hq2 by Molmil
Structural model of Set8 histone H4 Lys20 methyltransferase bound to nucleosome core particle
分子名称: DNA (149-MER), Guanine nucleotide exchange factor SRM1, Histone H2A, ...
著者Tavarekere, G, McGinty, R.K, Tan, S.
登録日2016-01-21
公開日2016-03-23
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (4.5 Å)
主引用文献Multivalent Interactions by the Set8 Histone Methyltransferase With Its Nucleosome Substrate.
J.Mol.Biol., 428, 2016
4LD9
DownloadVisualize
BU of 4ld9 by Molmil
Crystal structure of the N-terminally acetylated BAH domain of Sir3 bound to the nucleosome core particle
分子名称: Histone H2A, Histone H2B 1.1, Histone H3.2, ...
著者Arnaudo, N, Fernandez, I.S, McLaughlin, S.H, Peak-Chew, S.Y, Rhodes, D, Martino, F.
登録日2013-06-24
公開日2013-08-14
最終更新日2013-09-18
実験手法X-RAY DIFFRACTION (3.306 Å)
主引用文献The N-terminal acetylation of Sir3 stabilizes its binding to the nucleosome core particle.
Nat.Struct.Mol.Biol., 20, 2013
6YN1
DownloadVisualize
BU of 6yn1 by Molmil
Crystal structure of histone chaperone APLF acidic domain bound to the histone H2A-H2B-H3-H4 octamer
分子名称: Aprataxin and PNK-like factor, CHLORIDE ION, GLYCEROL, ...
著者Corbeski, I, Guo, X, Van Ingen, H, Sixma, T.K.
登録日2020-04-10
公開日2021-11-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Chaperoning of the histone octamer by the acidic domain of DNA repair factor APLF.
Sci Adv, 8, 2022
4JJN
DownloadVisualize
BU of 4jjn by Molmil
Crystal structure of heterochromatin protein Sir3 in complex with a silenced yeast nucleosome
分子名称: DNA (146-MER), Histone H2A.2, Histone H2B.2, ...
著者Wang, F, Li, G, Mohammed, A, Lu, C, Currie, M, Johnson, A, Moazed, D.
登録日2013-03-08
公開日2013-05-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.09 Å)
主引用文献Heterochromatin protein Sir3 induces contacts between the amino terminus of histone H4 and nucleosomal DNA.
Proc.Natl.Acad.Sci.USA, 110, 2013
4KUD
DownloadVisualize
BU of 4kud by Molmil
Crystal structure of N-terminal acetylated Sir3 BAH domain D205N mutant in complex with yeast nucleosome core particle
分子名称: Histone H2A.2, Histone H2B.1, Histone H3, ...
著者Yang, D, Fang, Q, Wang, M, Ren, R, Wang, H, He, M, Sun, Y, Yang, N, Xu, R.M.
登録日2013-05-22
公開日2013-08-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.203 Å)
主引用文献N alpha-acetylated Sir3 stabilizes the conformation of a nucleosome-binding loop in the BAH domain.
Nat.Struct.Mol.Biol., 20, 2013
6ZHX
DownloadVisualize
BU of 6zhx by Molmil
Cryo-EM structure of the regulatory linker of ALC1 bound to the nucleosome's acidic patch: nucleosome class.
分子名称: Chromodomain-helicase-DNA-binding protein 1-like, DNA (145-MER) Widom 601 sequence, Histone H2A type 1, ...
著者Bacic, L, Gaullier, G, Croll, T.I, Deindl, S.
登録日2020-06-24
公開日2020-12-23
最終更新日2021-07-14
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Mechanistic Insights into Regulation of the ALC1 Remodeler by the Nucleosome Acidic Patch.
Cell Rep, 33, 2020
8B0A
DownloadVisualize
BU of 8b0a by Molmil
Cryo-EM structure of ALC1 bound to an asymmetric, site-specifically PARylated nucleosome
分子名称: Chromodomain-helicase-DNA-binding protein 1-like, DNA (149-MER) Widom 601 sequence, Histone H2A type 1, ...
著者Bacic, L, Gaullier, G, Deindl, S.
登録日2022-09-07
公開日2023-09-20
最終更新日2024-04-03
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Asymmetric nucleosome PARylation at DNA breaks mediates directional nucleosome sliding by ALC1.
Nat Commun, 15, 2024
4KHA
DownloadVisualize
BU of 4kha by Molmil
Structural basis of histone H2A-H2B recognition by the essential chaperone FACT
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, Histone H2A, ...
著者Hondele, M, Halbach, F, Hassler, M, Ladurner, A.G.
登録日2013-04-30
公開日2013-05-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural basis of histone H2A-H2B recognition by the essential chaperone FACT.
Nature, 499, 2013

221051

件を2024-06-12に公開中

PDB statisticsPDBj update infoContact PDBjnumon