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6A8M
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N-terminal domain of FACT complex subunit SPT16 from Eremothecium gossypii (Ashbya gossypii)
分子名称: FACT complex subunit SPT16
著者Gaur, N.K, Are, V.N, Durani, V, Ghosh, B, Kumar, A, Kulkarni, K, Makde, R.D.
登録日2018-07-09
公開日2018-08-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Evolutionary conservation of protein dynamics: insights from all-atom molecular dynamics simulations of 'peptidase' domain of Spt16.
J.Biomol.Struct.Dyn., 2021
1F06
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THREE DIMENSIONAL STRUCTURE OF THE TERNARY COMPLEX OF CORYNEBACTERIUM GLUTAMICUM DIAMINOPIMELATE DEHYDROGENASE NADPH-L-2-AMINO-6-METHYLENE-PIMELATE
分子名称: L-2-AMINO-6-METHYLENE-PIMELIC ACID, MESO-DIAMINOPIMELATE D-DEHYDROGENASE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Cirilli, M, Scapin, G, Sutherland, A, Caplan, J.F, Vederas, J.C, Blanchard, J.S.
登録日2000-05-14
公開日2001-05-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The three-dimensional structure of the ternary complex of Corynebacterium glutamicum diaminopimelate dehydrogenase-NADPH-L-2-amino-6-methylene-pimelate.
Protein Sci., 9, 2000
1VPU
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BU of 1vpu by Molmil
NMR SOLUTION STRUCTURE OF THE HIV-1 VPU CYTOPLASMIC DOMAIN, 9 STRUCTURES
分子名称: VPU PROTEIN
著者Willbold, D, Hoffmann, S, Rosch, P.
登録日1997-01-28
公開日1997-05-15
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Secondary structure and tertiary fold of the human immunodeficiency virus protein U (Vpu) cytoplasmic domain in solution.
Eur.J.Biochem., 245, 1997
6O5T
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BU of 6o5t by Molmil
Crystal Structure of VIM-2 with Compound 16
分子名称: ACETATE ION, Beta-lactamase class B VIM-2, ZINC ION, ...
著者Akhtar, A, Chen, Y.
登録日2019-03-04
公開日2019-09-25
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Heteroaryl Phosphonates as Noncovalent Inhibitors of Both Serine- and Metallocarbapenemases.
J.Med.Chem., 62, 2019
6B17
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BU of 6b17 by Molmil
Design of a short thermally stable alpha-helix embedded in a macrocycle
分子名称: 3,3'-dimethyl-1,1'-biphenyl, Capped-strapped peptide
著者Wu, H, Acharyya, A, Wu, Y, Liu, L, Jo, H, Gai, F, DeGrado, W.F.
登録日2017-09-17
公開日2018-02-21
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Design of a Short Thermally Stable alpha-Helix Embedded in a Macrocycle.
Chembiochem, 19, 2018
1SLC
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X-RAY CRYSTALLOGRAPHY REVEALS CROSSLINKING OF MAMMALIAN LECTIN (GALECTIN-1) BY BIANTENNARY COMPLEX TYPE SACCHARIDES
分子名称: BOVINE GALECTIN-1, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Bourne, Y, Cambillau, C.
登録日1994-03-12
公開日1995-01-26
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crosslinking of mammalian lectin (galectin-1) by complex biantennary saccharides.
Nat.Struct.Biol., 1, 1994
2JSP
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BU of 2jsp by Molmil
The prokaryotic Cys2His2 zinc finger adopts a novel fold as revealed by the NMR structure of A. tumefaciens Ros DNA binding domain
分子名称: Transcriptional regulatory protein ros
著者Malgieri, G.
登録日2007-07-10
公開日2007-10-16
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献The prokaryotic Cys2His2 zinc-finger adopts a novel fold as revealed by the NMR structure of Agrobacterium tumefaciens Ros DNA-binding domain.
Proc.Natl.Acad.Sci.Usa, 104, 2007
6ANF
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BU of 6anf by Molmil
Design of a short thermo-stable alpha-helix embedded in a macrocycle
分子名称: 3,3'-dimethyl-1,1'-biphenyl, Capped-strapped peptide
著者Wu, H, Acharyya, A, Wu, Y, Liu, L, Jo, H, Gai, F, DeGrado, W.F.
登録日2017-08-13
公開日2018-02-21
最終更新日2024-11-13
実験手法SOLUTION NMR
主引用文献Design of a Short Thermally Stable alpha-Helix Embedded in a Macrocycle.
Chembiochem, 19, 2018
1SLB
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X-RAY CRYSTALLOGRAPHY REVEALS CROSSLINKING OF MAMMALIAN LECTIN (GALECTIN-1) BY BIANTENNARY COMPLEX TYPE SACCHARIDES
分子名称: BOVINE GALECTIN-1, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Bourne, Y, Cambillau, C.
登録日1994-03-12
公開日1995-01-26
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crosslinking of mammalian lectin (galectin-1) by complex biantennary saccharides.
Nat.Struct.Biol., 1, 1994
8ZBO
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BU of 8zbo by Molmil
Crystal structure of the biphotochromic fluorescent protein moxSAASoti (F97M variant) in its green on-state
分子名称: 1,2-ETHANEDIOL, F97M variant of the biphotochromic fluorescent protein moxSAASoti, NITRATE ION, ...
著者Boyko, K.M, Matyuta, I.O, Marynich, N.K, Minyaev, M.E, Khadiyatova, A.A, Popov, V.O, Savitsky, A.P.
登録日2024-04-26
公開日2024-06-12
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Single-point substitution F97M leads to in cellulo crystallization of the biphotochromic protein moxSAASoti.
Biochem.Biophys.Res.Commun., 732, 2024
1BUI
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BU of 1bui by Molmil
Structure of the ternary microplasmin-staphylokinase-microplasmin complex: a proteinase-cofactor-substrate complex in action
分子名称: L-alpha-glutamyl-N-{(1S)-4-{[amino(iminio)methyl]amino}-1-[(1S)-2-chloro-1-hydroxyethyl]butyl}glycinamide, Plasminogen, Staphylokinase
著者Parry, M.A.A, Fernandez-Catalan, C, Bergner, A, Huber, R, Hopfner, K, Schlott, B, Guehrs, K, Bode, W.
登録日1998-09-04
公開日1999-09-02
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献The ternary microplasmin-staphylokinase-microplasmin complex is a proteinase-cofactor-substrate complex in action.
Nat.Struct.Biol., 5, 1998
8XAK
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BU of 8xak by Molmil
Structure of Pif1-G4 complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent DNA helicase PIF1, DNA (34-MER), ...
著者Hong, Z, Song, H.
登録日2023-12-04
公開日2024-07-31
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Eukaryotic Pif1 helicase unwinds G-quadruplex and dsDNA using a conserved wedge.
Nat Commun, 15, 2024
3T0E
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BU of 3t0e by Molmil
Crystal structure of a complete ternary complex of T cell receptor, peptide-MHC and CD4
分子名称: HLA class II histocompatibility antigen, DR alpha chain, DRB1-4 beta chain, ...
著者Yin, Y, Mariuzza, R.A.
登録日2011-07-20
公開日2012-03-07
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献Crystal structure of a complete ternary complex of T-cell receptor, peptide-MHC, and CD4.
Proc.Natl.Acad.Sci.USA, 109, 2012
5JDO
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BU of 5jdo by Molmil
T. congolense haptoglobin-haemoglobin receptor in complex with haemoglobin
分子名称: Haptoglobin-haemoglobin receptor, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
著者Lane-Serff, H, Higgins, M.K.
登録日2016-04-17
公開日2016-04-27
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Evolutionary diversification of the trypanosome haptoglobin-haemoglobin receptor from an ancestral haemoglobin receptor.
Elife, 5, 2016
5BQM
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BU of 5bqm by Molmil
Crystal structure of SXN101959, a Clostridium botulinum neurotoxin type D derivative and targeted secretion inhibitor
分子名称: Botulinum neurotoxin type D, Somatoliberin,Botulinum neurotoxin type D, ZINC ION
著者Masuyer, G, Davies, J.R, Moore, K, Chaddock, J.A, Acharya, K.R.
登録日2015-05-29
公開日2015-08-19
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural analysis of Clostridium botulinum neurotoxin type D as a platform for the development of targeted secretion inhibitors.
Sci Rep, 5, 2015
2CD0
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BU of 2cd0 by Molmil
STRUCTURE OF HUMAN LAMBDA-6 LIGHT CHAIN DIMER WIL
分子名称: PROTEIN (BENCE-JONES PROTEIN WIL, A VARIABLE DOMAIN FROM LAMBDA-6 TYPE IMMUNOGLOBULIN LIGHT CHAIN)
著者Pokkuluri, P.R, Solomon, A, Weiss, D.T, Stevens, F.J, Schiffer, M.
登録日1999-03-08
公開日2000-03-08
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Tertiary structure of human lambda 6 light chains.
Amyloid, 6, 1999
1CBM
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BU of 1cbm by Molmil
THE 1.8 ANGSTROM STRUCTURE OF CARBONMONOXY-BETA4 HEMOGLOBIN: ANALYSIS OF A HOMOTETRAMER WITH THE R QUATERNARY STRUCTURE OF LIGANDED ALPHA2BETA2 HEMOGLOBIN
分子名称: CARBON MONOXIDE, HEMOGLOBIN BETA 4 (CARBONMONOXY), PROTOPORPHYRIN IX CONTAINING FE, ...
著者Borgstahl, G.E.O, Arnone, A.
登録日1993-02-18
公開日1994-07-31
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献The 1.8 A structure of carbonmonoxy-beta 4 hemoglobin. Analysis of a homotetramer with the R quaternary structure of liganded alpha 2 beta 2 hemoglobin.
J.Mol.Biol., 236, 1994
1TLU
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BU of 1tlu by Molmil
Crystal Structure of Thermotoga maritima S-adenosylmethionine decarboxylase
分子名称: S-adenosylmethionine decarboxylase proenzyme, AdoMetDC, SamDC
著者Toms, A.V, Kinsland, C, McCloskey, D.E, Pegg, A.E, Ealick, S.E.
登録日2004-06-09
公開日2004-06-29
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Evolutionary Links as Revealed by the Structure of Thermotoga maritima S-Adenosylmethionine Decarboxylase.
J.Biol.Chem., 279, 2004
1TMI
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Structure of Thermotoga maritima S63A non-processing mutant S-adenosylmethionine decarboxylase
分子名称: S-adenosylmethionine decarboxylase proenzyme, AdoMetDC, SamDC
著者Toms, A.V, Kinsland, C, McCloskey, D.E, Pegg, A.E, Ealick, S.E.
登録日2004-06-10
公開日2004-06-29
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Evolutionary Links as Revealed by the Structure of Thermotoga maritima S-Adenosylmethionine Decarboxylase.
J.Biol.Chem., 279, 2004
1SLA
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BU of 1sla by Molmil
X-RAY CRYSTALLOGRAPHY REVEALS CROSSLINKING OF MAMMALIAN LECTIN (GALECTIN-1) BY BIANTENNARY COMPLEX TYPE SACCHARIDES
分子名称: BOVINE GALECTIN-1, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Bourne, Y, Cambillau, C.
登録日1994-03-12
公開日1995-01-26
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Crosslinking of mammalian lectin (galectin-1) by complex biantennary saccharides.
Nat.Struct.Biol., 1, 1994
1KP4
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CALCIUM-BOUND FORM OF PROKARYOTIC PHOSPHOLIPASE A2
分子名称: CALCIUM ION, phospholipase A2
著者Matoba, Y, Katsube, Y, Sugiyama, M.
登録日2001-12-28
公開日2002-09-04
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The crystal structure of prokaryotic phospholipase A2.
J.Biol.Chem., 277, 2002
5JQI
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BU of 5jqi by Molmil
Crystal structure of FimH A62S from E. coli UTI89 bound to FimG N-terminal extension
分子名称: FimG N-terminal extension, GLYCEROL, Type 1 fimbiral adhesin FimH
著者Kalas, V, Hultgren, S.J.
登録日2016-05-05
公開日2017-02-22
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.962 Å)
主引用文献Evolutionary fine-tuning of conformational ensembles in FimH during host-pathogen interactions.
Sci Adv, 3, 2017
8SGH
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Cryo-EM structure of Karyopherin-beta2 bound to HNRNPH2 PY-NLS
分子名称: Heterogeneous nuclear ribonucleoprotein H2, N-terminally processed, Transportin-1
著者Gonzalez, A, Fung, H.Y.J, Chook, Y.M.
登録日2023-04-12
公開日2023-06-14
最終更新日2023-08-16
実験手法ELECTRON MICROSCOPY (3.17 Å)
主引用文献A new Karyopherin-beta 2 binding PY-NLS epitope of HNRNPH2 linked to neurodevelopmental disorders.
Structure, 31, 2023
1A5F
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FAB FRAGMENT OF A MONOCLONAL ANTI-E-SELECTIN ANTIBODY
分子名称: MONOCLONAL ANTI-E-SELECTIN 7A9 ANTIBODY (HEAVY CHAIN), MONOCLONAL ANTI-E-SELECTIN 7A9 ANTIBODY (LIGHT CHAIN)
著者Rodriguez-Romero, A, Almog, O, Tordova, M, Randhawa, Z.
登録日1998-02-16
公開日1999-04-20
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Primary and tertiary structures of the Fab fragment of a monoclonal anti-E-selectin 7A9 antibody that inhibits neutrophil attachment to endothelial cells.
J.Biol.Chem., 273, 1998
2OFP
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BU of 2ofp by Molmil
Crystal structure of Escherichia coli ketopantoate reductase in a ternary complex with NADP+ and pantoate
分子名称: 1,4-DIETHYLENE DIOXIDE, ACETATE ION, Ketopantoate reductase, ...
著者Ciulli, A, Chirgadze, D.Y, Smith, A.G, Blundell, T.L, Abell, C.
登録日2007-01-04
公開日2007-01-16
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of Escherichia coli Ketopantoate Reductase in a Ternary Complex with NADP+ and Pantoate Bound: SUBSTRATE RECOGNITION, CONFORMATIONAL CHANGE, AND COOPERATIVITY.
J.Biol.Chem., 282, 2007

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