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3H9B
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Structure of a mutant methionyl-tRNA synthetase with modified specificity complexed with azidonorleucine
分子名称: 6-azido-L-norleucine, CITRIC ACID, Methionyl-tRNA synthetase, ...
著者Schmitt, E, Tanrikulu, I.C, Yoo, T.H, Panvert, M, Tirrell, D.A, Mechulam, Y.
登録日2009-04-30
公開日2009-12-08
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Switching from an induced-fit to a lock-and-key mechanism in an aminoacyl-tRNA synthetase with modified specificity.
J.Mol.Biol., 394, 2009
3W77
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Crystal Structure of azoreductase AzrA
分子名称: FLAVIN MONONUCLEOTIDE, FMN-dependent NADH-azoreductase
著者Ogata, D, Yu, J, Ooi, T, Yao, M.
登録日2013-02-27
公開日2014-02-12
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Structures of AzrA and of AzrC complexed with substrate or inhibitor: insight into substrate specificity and catalytic mechanism.
Acta Crystallogr.,Sect.D, 70, 2014
2P5Y
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BU of 2p5y by Molmil
Crystal structure of Thermus thermophilus HB8 UDP-glucose 4-epimerase complex with NAD
分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, UDP-glucose 4-epimerase
著者Fu, Z.-Q, Chen, L, Ebihara, A, Shinkai, A, Kuramitsu, S, Yokoyama, S, Zhu, J, Swindell, J.T, Chrzas, J, Rose, J.P, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG), RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-16
公開日2007-04-17
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Crystal structure of Thermus thermophilus HB8 UDP-glucose 4-epimerase complex with NAD
To be Published
3W6L
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BU of 3w6l by Molmil
Contribution of disulfide bond toward thermostability in hyperthermostable endocellulase
分子名称: 458aa long hypothetical endo-1,4-beta-glucanase, PHOSPHATE ION
著者Kim, H.-W, Ishikawa, K.
登録日2013-02-15
公開日2013-05-29
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (1.751 Å)
主引用文献The role of disulfide bond in hyperthermophilic endocellulase
Extremophiles, 17, 2013
3GKN
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BU of 3gkn by Molmil
Insights into the Alkyl Peroxide Reduction Activity of Xanthomonas campestris Bacterioferritin Comigratory Protein from the Trapped Intermediate/Ligand Complex Structures
分子名称: Bacterioferritin comigratory protein, GLYCEROL, NAPHTHALENE-2,6-DISULFONIC ACID, ...
著者Liao, S.-J.
登録日2009-03-11
公開日2009-06-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Insights into the alkyl peroxide reduction pathway of Xanthomonas campestris bacterioferritin comigratory protein from the trapped intermediate-ligand complex structures
J.Mol.Biol., 390, 2009
2P83
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Potent and selective isophthalamide S2 hydroxyethylamine inhibitor of BACE1
分子名称: Beta-secretase 1, N~3~-{(1S,2R)-1-(3,5-DIFLUOROBENZYL)-2-HYDROXY-3-[(3-METHOXYBENZYL)AMINO]PROPYL}-N~1~,N~1~-DIPROPYLBENZENE-1,3,5-TRICARBOXAMIDE, PHOSPHATE ION
著者Benson, T.E, Prince, D.B, Tomasselli, A.G, Emmons, T.L, Paddock, D.J.
登録日2007-03-21
公開日2007-06-19
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Potent and selective isophthalamide S(2) hydroxyethylamine inhibitors of BACE1.
Bioorg.Med.Chem.Lett., 17, 2007
2P1W
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BU of 2p1w by Molmil
structure of the phosphothreonine lyase SpvC, the effector protein from Salmonella
分子名称: 27.5 kDa virulence protein
著者Zhu, Y, Wang, D.C, Shao, F.
登録日2007-03-06
公開日2007-12-11
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural insights into the enzymatic mechanism of the pathogenic MAPK phosphothreonine lyase.
Mol.Cell, 28, 2007
2P93
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Factor xa in complex with the inhibitor 5-chloro-N-(2-(4-(2-oxopyridin-1(2H)-yl)benzamido)ethyl)thiophene-2-carboxamide
分子名称: 5-CHLORO-N-(2-(4-(2-OXOPYRIDIN-1(2H)-YL)BENZAMIDO)ETHYL)THIOPHENE-2-CARBOXAMIDE, Factor Xa
著者Chang, C.-H.
登録日2007-03-23
公開日2007-07-24
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献SAR and X-ray structures of enantiopure 1,2-cis-(1R,2S)-cyclopentyldiamine and cyclohexyldiamine derivatives as inhibitors of coagulation Factor Xa
Bioorg.Med.Chem.Lett., 17, 2007
3H0U
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BU of 3h0u by Molmil
Crystal structure of a putative enoyl-CoA hydratase from Streptomyces avermitilis
分子名称: DIMETHYL SULFOXIDE, Putative enoyl-CoA hydratase, SODIUM ION
著者Bonanno, J.B, Freeman, J, Bain, K.T, Miller, S, Romero, R, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2009-04-10
公開日2009-04-21
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of a putative enoyl-CoA hydratase from Streptomyces avermitilis
To be Published
2P9T
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Crystal Structure of Phosphoglycerate Kinase-2 bound to 3-phosphoglycerate
分子名称: 3-PHOSPHOGLYCERIC ACID, Phosphoglycerate kinase, testis specific
著者Sawyer, G.M, Monzingo, A.F, Poteet, E.C, Robertus, J.D.
登録日2007-03-26
公開日2007-11-27
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献X-ray analysis of phosphoglycerate kinase 2, a sperm-specific isoform from Mus musculus.
Proteins, 71, 2007
3Q6T
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BU of 3q6t by Molmil
Salivary protein from Lutzomyia longipalpis, Ligand free
分子名称: 43.2 kDa salivary protein, CITRIC ACID
著者Andersen, J.F, Xu, X, Chang, B.W, Collin, N, Valenzuela, J.G, Ribeiro, J.M.
登録日2011-01-03
公開日2011-07-27
最終更新日2019-10-23
実験手法X-RAY DIFFRACTION (2.93 Å)
主引用文献Structure and function of a "yellow" protein from saliva of the sand fly Lutzomyia longipalpis that confers protective immunity against Leishmania major infection.
J.Biol.Chem., 286, 2011
3Q9O
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BU of 3q9o by Molmil
Full-length Cholix toxin from Vibrio cholerae in complex with NAD
分子名称: GLYCEROL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, exotoxin A
著者Merrill, A.R, Jorgensen, R, Fieldhouse, R.J.
登録日2011-01-09
公開日2012-01-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.793 Å)
主引用文献The 1.8 a cholix toxin crystal structure in complex with NAD+ and evidence for a new kinetic model.
J.Biol.Chem., 287, 2012
3GQ4
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BU of 3gq4 by Molmil
Sequence-matched MutM Lesion Recognition Complex 5 (LRC5)
分子名称: DNA (5'-D(*AP*GP*GP*TP*AP*GP*AP*CP*CP*CP*GP*GP*AP*CP*GP*C)-3'), DNA (5'-D(*TP*GP*CP*GP*TP*CP*CP*GP*(8OG)P*GP*TP*CP*TP*AP*CP*C)-3'), DNA glycosylase, ...
著者Spong, M.C, Qi, Y, Verdine, G.L.
登録日2009-03-23
公開日2009-11-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Encounter and extrusion of an intrahelical lesion by a DNA repair enzyme.
Nature, 462, 2009
3H58
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BU of 3h58 by Molmil
Myoglobin Cavity Mutant H64LV68N Met form
分子名称: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Soman, J, Olson, J.S.
登録日2009-04-21
公開日2009-05-05
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Optical detection of disordered water within a protein cavity.
J.Am.Chem.Soc., 131, 2009
3GQY
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BU of 3gqy by Molmil
Activator-Bound Structure of Human Pyruvate Kinase M2
分子名称: 1,6-di-O-phosphono-beta-D-fructofuranose, 1-(2,3-dihydro-1,4-benzodioxin-6-ylsulfonyl)-4-[(4-methoxyphenyl)sulfonyl]piperazine, L(+)-TARTARIC ACID, ...
著者Hong, B, Dimov, S, Tempel, W, Auld, D, Thomas, C, Boxer, M, Jianq, J.-K, Skoumbourdis, A, Min, S, Southall, N, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Inglese, J, Park, H, Structural Genomics Consortium (SGC)
登録日2009-03-24
公開日2009-04-07
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Activator-Bound Structures of Human Pyruvate Kinase M2
to be published
2P5G
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BU of 2p5g by Molmil
Crystal structure of RB69 gp43 in complex with DNA with dAMP opposite an abasic site analog in a 21mer template
分子名称: DNA polymerase, Primer DNA, Template DNA
著者Zahn, K.E, Belrhali, H, Wallace, S.S, Doublie, S.
登録日2007-03-15
公開日2007-10-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Caught bending the a-rule: crystal structures of translesion DNA synthesis with a non-natural nucleotide.
Biochemistry, 46, 2007
2OTZ
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BU of 2otz by Molmil
N-methylaniline in complex with T4 Lysozyme L99A
分子名称: Lysozyme, N-METHYLANILINE, PHOSPHATE ION
著者Graves, A.P, Shoichet, B.K.
登録日2007-02-09
公開日2007-08-07
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Predicting absolute ligand binding free energies to a simple model site.
J.Mol.Biol., 371, 2007
3Q9G
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VQIVY segment from Alzheimer's tau displayed on 42-membered macrocycle scaffold
分子名称: ACETIC ACID, Cyclic pseudo-peptide VQIV(4BF)(ORN)(HAO)KL(ORN), GLYCEROL
著者Liu, C, Sawaya, M.R, Eisenberg, D, Nowick, J.S, Cheng, P, Zheng, J.
登録日2011-01-07
公開日2011-06-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Characteristics of Amyloid-Related Oligomers Revealed by Crystal Structures of Macrocyclic beta-Sheet Mimics.
J.Am.Chem.Soc., 133, 2011
3Q9J
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AIIFL segment derived from Alzheimer's Amyloid-Beta displayed on 42-membered macrocycle scaffold
分子名称: CHLORIDE ION, Cyclic pseudo-peptide AIIFL(ORN)(HAO)YK(ORN), GLYCEROL, ...
著者Liu, C, Sawaya, M.R, Eisenberg, D, Nowick, J.S, Cheng, P, Zheng, J.
登録日2011-01-07
公開日2011-06-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Characteristics of Amyloid-Related Oligomers Revealed by Crystal Structures of Macrocyclic beta-Sheet Mimics.
J.Am.Chem.Soc., 133, 2011
3GMW
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BU of 3gmw by Molmil
Crystal Structure of Beta-Lactamse Inhibitory Protein-I (BLIP-I) in Complex with TEM-1 Beta-Lactamase
分子名称: B-lactamase, Beta-lactamase inhibitory protein BLIP-I, PHOSPHATE ION
著者Lim, D.C, Gretes, M, Strynadka, N.C.J.
登録日2009-03-15
公開日2009-03-31
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Insights into positive and negative requirements for protein-protein interactions by crystallographic analysis of the beta-lactamase inhibitory proteins BLIP, BLIP-I, and BLP.
J.Mol.Biol., 389, 2009
3GQ2
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Crystal Structure of the Dimer of the p115 Tether Globular Head Domain
分子名称: General vesicular transport factor p115
著者An, Y, Elsliger, M.A, Wilson, I.A.
登録日2009-03-23
公開日2009-11-03
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Structural and functional analysis of the globular head domain of p115 provides insight into membrane tethering.
J.Mol.Biol., 391, 2009
3QA0
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Crystal structure of the apo-form of human CK2 alpha at pH 6.5
分子名称: 1,2-ETHANEDIOL, Casein kinase II subunit alpha, SULFATE ION
著者Battistutta, R, Ranchio, A, Papinutto, E.
登録日2011-01-10
公開日2012-01-11
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural and functional analysis of the flexible regions of the catalytic alpha-subunit of protein kinase CK2
To be Published
2OW7
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Golgi alpha-mannosidase II complex with (1R,6S,7R,8S)-1-thioniabicyclo[4.3.0]nonan-7,8-diol chloride
分子名称: (1R,6S,7R,8S)-1-THIONIABICYCLO[4.3.0]NONAN-7,8-DIOL, (4R)-2-METHYLPENTANE-2,4-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Kuntz, D.A.
登録日2007-02-15
公開日2008-01-08
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Binding of sulfonium-ion analogues of di-epi-swainsonine and 8-epi-lentiginosine to Drosophila Golgi alpha-mannosidase II: The role of water in inhibitor binding.
Proteins, 71, 2008
2P9M
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Crystal structure of conserved hypothetical protein MJ0922 from Methanocaldococcus jannaschii DSM 2661
分子名称: Hypothetical protein MJ0922
著者Zhao, M, Ebihara, A, Shinkai, A, Kuramitsu, S, Yokoyama, S, Zhu, J, Swindell II, J.T, Chen, L, Fu, Z.-Q, Charz, J, Rose, J.P, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG), RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-26
公開日2007-07-03
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Crystal structure of conserved hypothetical protein MJ0922 from Methanocaldococcus jannaschii DSM 2661
To be Published
3GUE
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Crystal Structure of UDP-glucose phosphorylase from Trypanosoma Brucei, (Tb10.389.0330)
分子名称: (2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, GLYCEROL, SULFATE ION, ...
著者Wernimont, A.K, Marino, K, Lin, Y.H, Mackenzie, F, Kozieradzki, I, Cossar, D, Zhao, Y, Schapira, M, Bochkarev, A, Arrowsmith, C.H, Bountra, C, Weigelt, J, Edwards, A.M, Ferguson, M.A.J, Hui, R, Amani, M, Structural Genomics Consortium (SGC)
登録日2009-03-29
公開日2009-08-18
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Crystal Structure of UDP-glucose phosphorylase from Trypanosoma Brucei, (Tb10.389.0330)
To be Published

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