PDB: 223790 件ウェブページステータス検索Chemie searchBIRD

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2Y7N	Structure of N-terminal domain of Candida albicans als9-2 - Apo Form 分子名称: AGGLUTININ-LIKE ALS9 PROTEIN 著者 Salgado, P.S, Cota, E. 登録日 2011-01-31 公開日 2011-10-05 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural Basis for the Broad Specificity to Host- Cell Ligands by the Pathogenic Fungus Candida Albicans. Proc.Natl.Acad.Sci.USA, 108, 2011
2Y7X	The discovery of potent and long-acting oral factor Xa inhibitors with tetrahydroisoquinoline and benzazepine P4 motifs 分子名称: 6-CHLORO-N-[(3S)-1-(5-FLUORO-1,2,3,4-TETRAHYDROISOQUINOLIN-6-YL)-2-OXO-PYRROLIDIN-3-YL]NAPHTHALENE-2-SULFONAMIDE, ACTIVATED FACTOR XA HEAVY CHAIN, CALCIUM ION, ... 著者 Watson, N.S, Adams, C, Belton, D, Brown, D, Burns-Kurtis, C.L, Chaudry, L, Chan, C, Convery, M.A, Davies, D.E, Exall, A.M, Harling, J.D, Irving, W.R, Irvine, S, Kleanthous, S, McLay, I.M, Pateman, A.J, Patikis, A.N, Roethka, T.J, Senger, S, Stelman, G.J, Toomey, J.R, West, R.I, Whittaker, C, Zhou, P, Young, R.J. 登録日 2011-02-02 公開日 2011-03-16 最終更新日 2017-06-28 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 The Discovery of Potent and Long-Acting Oral Factor Xa Inhibitors with Tetrahydroisoquinoline and Benzazepine P4 Motifs. Bioorg.Med.Chem.Lett., 21, 2011
2YOC	Crystal structure of PulA from Klebsiella oxytoca 分子名称: CALCIUM ION, PULLULANASE, SULFATE ION 著者 Francetic, O, Mechaly, A.E, Tello-Manigne, D, Buschiazzo, A, Bernarde, C, Nadeau, N, Pugsley, A.P, Alzari, P.M. 登録日 2012-10-23 公開日 2013-11-06 最終更新日 2016-01-20 実験手法 X-RAY DIFFRACTION (2.88 Å) 主引用文献 Structural Basis of Pullulanase Membrane Binding and Secretion Revealed by X-Ray Crystallography, Molecular Dynamics and Biochemical Analysis Structure, 24, 2016
6WQ0	Cryo-EM of the S. solfataricus rod-shaped virus, SSRV1 分子名称: DNA (301-MER), Structural protein 著者 Wang, F, Baquero, D.P, Beltran, L.C, Prangishvili, D, Krupovic, M, Egelman, E.H. 登録日 2020-04-28 公開日 2020-07-29 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Structures of filamentous viruses infecting hyperthermophilic archaea explain DNA stabilization in extreme environments. Proc.Natl.Acad.Sci.USA, 117, 2020
2YRR	hypothetical alanine aminotransferase (TTH0173) from Thermus thermophilus HB8 分子名称: Aminotransferase, class V, PYRIDOXAL-5'-PHOSPHATE 著者 Miyahara, I, Matsumura, M, Goto, M, Omi, R, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2007-04-02 公開日 2008-04-15 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 hypothetical alanine aminotransferase (TTH0173) from Thermus thermophilus HB8 To be Published
6WPR	Crystal structure of a putative 3-oxoacyl-ACP reductase (FabG) with NADP(H) from Acinetobacter baumannii 分子名称: 3-oxoacyl-[acyl-carrier-protein] reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE 著者 Cross, E.M, Forwood, J.K. 登録日 2020-04-27 公開日 2020-06-10 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Insights into Acinetobacter baumannii fatty acid synthesis 3-oxoacyl-ACP reductases. Sci Rep, 11, 2021
7C2W	Crystal Structure of IRAK4 kinase in complex with a small molecule inhibitor 分子名称: Interleukin-1 receptor-associated kinase 4, N-(2-morpholin-4-yl-1,3-benzoxazol-6-yl)-6-pyridin-4-yl-pyridine-2-carboxamide 著者 Krishnamurthy, N.R, Anirudha, L. 登録日 2020-05-09 公開日 2020-11-25 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Discovery of CA-4948, an Orally Bioavailable IRAK4 Inhibitor for Treatment of Hematologic Malignancies. Acs Med.Chem.Lett., 11, 2020
7CL5	The crystal structure of KanJ in complex with kanamycin B and N-oxalylglycine 分子名称: (1R,2S,3S,4R,6S)-4,6-DIAMINO-3-[(3-AMINO-3-DEOXY-ALPHA-D-GLUCOPYRANOSYL)OXY]-2-HYDROXYCYCLOHEXYL 2,6-DIAMINO-2,6-DIDEOXY-ALPHA-D-GLUCOPYRANOSIDE, Kanamycin B dioxygenase, N-OXALYLGLYCINE, ... 著者 Kitayama, Y, Miyanaga, A, Kudo, F, Eguchi, T. 登録日 2020-07-20 公開日 2021-01-13 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Stepwise Post-glycosylation Modification of Sugar Moieties in Kanamycin Biosynthesis. Chembiochem, 22, 2021
6WQD	The 1.95 A Crystal Structure of the Co-factor Complex of NSP7 and the C-terminal Domain of NSP8 from SARS-CoV-2 分子名称: 1,2-ETHANEDIOL, Non-structural protein 7, Non-structural protein 8 著者 Kim, Y, Wilamowski, M, Jedrzejczak, R, Maltseva, N, Endres, M, Godzik, A, Michalska, K, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2020-04-28 公開日 2020-05-06 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Transient and stabilized complexes of Nsp7, Nsp8, and Nsp12 in SARS-CoV-2 replication. Biophys.J., 120, 2021
2YJC	CATHEPSIN L WITH A NITRILE INHIBITOR 分子名称: (2S,4R)-1-[1-(4-chlorophenyl)cyclopropyl]carbonyl-4-(2-chlorophenyl)sulfonyl-N-[1-(iminomethyl)cyclopropyl]pyrrolidine-2-carboxamide, CATHEPSIN L1 著者 Banner, D.W, Benz, J.M, Haap, W. 登録日 2011-05-19 公開日 2011-11-23 最終更新日 2011-11-30 実験手法 X-RAY DIFFRACTION (1.14 Å) 主引用文献 Halogen Bonding at the Active Sites of Human Cathepsin L and Mek1 Kinase: Efficient Interactions in Different Environments. Chemmedchem, 6, 2011
7C6X	Crystal structure of beta-glycosides-binding protein (W41A) of ABC transporter in an open state (Form I) 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ... 著者 Kanaujia, S.P, Chandravanshi, M, Samanta, R. 登録日 2020-05-22 公開日 2020-09-16 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Conformational Trapping of a beta-Glucosides-Binding Protein Unveils the Selective Two-Step Ligand-Binding Mechanism of ABC Importers. J.Mol.Biol., 432, 2020
2YJL	Structural characterization of a secretin pilot protein from the type III secretion system (T3SS) of Pseudomonas aeruginosa 分子名称: EXOENZYME S SYNTHESIS PROTEIN B, NICKEL (II) ION, SULFATE ION 著者 Izore, T, Perdu, C, Job, V, Atree, I, Faudry, E, Dessen, A. 登録日 2011-05-20 公開日 2011-08-10 最終更新日 2011-10-12 実験手法 X-RAY DIFFRACTION (1.81 Å) 主引用文献 Structural Characterization and Membrane Localization of Exsb from the Type III Secretion System (T3Ss) of Pseudomonas Aeruginosa J.Mol.Biol., 413, 2011
2YWI	Crystal structure of uncharacterized conserved protein from Geobacillus kaustophilus 分子名称: Hypothetical conserved protein 著者 Manzoku, M, Ebihara, A, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2007-04-20 公開日 2007-10-23 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Crystal structure of uncharacterized conserved protein from Geobacillus kaustophilus to be published
2YWQ	Crystal structure of Thermus thermophilus Protein Y N-terminal domain 分子名称: Ribosomal subunit interface protein 著者 Kawazoe, M, Takemoto, C, Kaminishi, T, Tatsuguchi, A, Saito, Y, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2007-04-21 公開日 2008-04-15 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.64 Å) 主引用文献 Crystal structure of Thermus thermophilus Protein Y N-terminal domain To be Published
2YX8	Crystal structure of the extracellular domain of human RAMP1 分子名称: Receptor activity-modifying protein 1 著者 Kusano, S, Kukimoto-Niino, M, Shirouzu, M, Shindo, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2007-04-24 公開日 2008-04-29 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal structure of the human receptor activity-modifying protein 1 extracellular domain. Protein Sci., 17, 2008
7CCE	crystal structure of Arabidopsis AIPP3 BAH domain in complex with an H3K27me3 peptide 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Bromo-adjacent homology (BAH) domain-containing protein, Histone H3.2 著者 Yuan, J, Du, J. 登録日 2020-06-17 公開日 2020-12-16 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.404 Å) 主引用文献 Coupling of H3K27me3 recognition with transcriptional repression through the BAH-PHD-CPL2 complex in Arabidopsis. Nat Commun, 11, 2020
2YZ1	Crystal structure of the ligand-binding domain of murine SHPS-1/SIRP alpha 分子名称: Tyrosine-protein phosphatase non-receptor type substrate 1 著者 Nakaishi, A. 登録日 2007-05-02 公開日 2007-12-11 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Structural insight into the specific interaction between murine SHPS-1/SIRP alpha and its ligand CD47 J.Mol.Biol., 375, 2008
4K1J	Induced opening of influenza virus neuraminidase N2 150-loop suggests an important role in inhibitor binding 分子名称: (3R,4R,5S)-4-(acetylamino)-5-amino-3-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... 著者 Wu, Y, Gao, F, Qi, J.X, Gao, G.F. 登録日 2013-04-05 公開日 2013-06-05 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Induced opening of influenza virus neuraminidase N2 150-loop suggests an important role in inhibitor binding Sci Rep, 3, 2013
7CK0	Room temperature structure of glucose isomerase delivered in lard by serial millisecond crystallography 分子名称: MAGNESIUM ION, Xylose isomerase 著者 Nam, K.H. 登録日 2020-07-15 公開日 2020-11-18 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Lard Injection Matrix for Serial Crystallography. Int J Mol Sci, 21, 2020
6X1U	Structure of pHis Fab (SC39-4) in complex with pHis mimetic peptide 分子名称: 1,2-ETHANEDIOL, ACETATE ION, ACLYana-3-pTza peptide, ... 著者 Kalagiri, R, Stanfield, R, Wilson, I.A, Hunter, T. 登録日 2020-05-19 公開日 2021-02-03 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.641 Å) 主引用文献 Structural basis for differential recognition of phosphohistidine-containing peptides by 1-pHis and 3-pHis monoclonal antibodies. Proc.Natl.Acad.Sci.USA, 118, 2021
2YMW	Structure of the epsilon-lysine oxidase from Marinomonas mediterranea 分子名称: ETHANOL, GLYCEROL, L-LYSINE 6-OXIDASE, ... 著者 Medrano, F.J, Romero, A. 登録日 2012-10-10 公開日 2013-10-23 最終更新日 2017-11-08 実験手法 X-RAY DIFFRACTION (2.41 Å) 主引用文献 Structure of the Epsilon-Lysine Oxidase from Marinomonas Mediterranea To be Published
7C5E	Crystal structure of Keap1 in complex with fumarate (FUM) 分子名称: ACETATE ION, FUMARIC ACID, Kelch-like ECH-associated protein 1, ... 著者 Padmanabhan, B, Unni, S, Deshmukh, P. 登録日 2020-05-19 公開日 2020-08-05 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Structural insights into the multiple binding modes of Dimethyl Fumarate (DMF) and its analogs to the Kelch domain of Keap1. Febs J., 288, 2021
7CMD	Crystal structure of the SARS-CoV-2 PLpro with GRL0617 分子名称: 5-amino-2-methyl-N-[(1R)-1-naphthalen-1-ylethyl]benzamide, Non-structural protein 3, ZINC ION 著者 Gao, X, Cui, S. 登録日 2020-07-27 公開日 2020-09-02 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.59 Å) 主引用文献 Crystal structure of SARS-CoV-2 papain-like protease. Acta Pharm Sin B, 11, 2021
7CNG	Structure of CDK5R1 bound FEM1B 分子名称: Protein fem-1 homolog B,Peptide from Cyclin-dependent kinase 5 activator 1, SULFATE ION 著者 Chen, X, Liao, S, Xu, C. 登録日 2020-07-31 公開日 2020-10-21 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (3.49 Å) 主引用文献 Molecular basis for arginine C-terminal degron recognition by Cul2 FEM1 E3 ligase. Nat.Chem.Biol., 17, 2021
6WZJ	LY3041658 Fab bound to CXCL2 分子名称: C-X-C motif chemokine 2, LY3041658 Fab Heavy Chain, LY3041658 Fab Light Chain 著者 Durbin, J.D, Druzina, Z. 登録日 2020-05-14 公開日 2020-11-25 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.37 Å) 主引用文献 Discovery and characterization of a neutralizing pan-ELR+CXC chemokine monoclonal antibody. Mabs, 12

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