Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6ZYF
DownloadVisualize
BU of 6zyf by Molmil
Notum_Ghrelin complex
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Palmitoleoyl-protein carboxylesterase NOTUM, ...
著者Zhao, Y, Jones, E.Y.
登録日2020-07-31
公開日2021-03-10
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Notum deacylates octanoylated ghrelin.
Mol Metab, 49, 2021
7A6P
DownloadVisualize
BU of 7a6p by Molmil
Structural determinants underlying the adduct lifetime in a short LOV protein PpSB2-LOV
分子名称: DI(HYDROXYETHYL)ETHER, FLAVIN MONONUCLEOTIDE, Putative Sensory box protein
著者Arinkin, V, Granzin, J, Batra-Safferling, R.
登録日2020-08-26
公開日2021-03-10
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Structural determinants underlying the adduct lifetime in the LOV proteins of Pseudomonas putida.
Febs J., 288, 2021
3K77
DownloadVisualize
BU of 3k77 by Molmil
X-ray crystal structure of XRCC1
分子名称: DNA repair protein XRCC1
著者Cuneo, M.J, London, R.E.
登録日2009-10-12
公開日2010-04-28
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.597 Å)
主引用文献Oxidation state of the XRCC1 N-terminal domain regulates DNA polymerase beta binding affinity.
Proc.Natl.Acad.Sci.USA, 107, 2010
7ADV
DownloadVisualize
BU of 7adv by Molmil
Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with magnesium and the INSTI XZ447 (compound 6v)
分子名称: 4-azanyl-~{N}-[[2,4-bis(fluoranyl)phenyl]methyl]-6-[2-(2-morpholin-4-ylethylsulfonyl)ethyl]-1-oxidanyl-2-oxidanylidene-1,8-naphthyridine-3-carboxamide, DNA (5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*CP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*GP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*A)-3'), ...
著者Pye, V.E, Cherepanov, P.
登録日2020-09-16
公開日2021-03-24
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献HIV-1 Integrase Inhibitors with Modifications That Affect Their Potencies against Drug Resistant Integrase Mutants.
Acs Infect Dis., 7, 2021
8RHN
DownloadVisualize
BU of 8rhn by Molmil
Structure of the 55LCC ATPase complex
分子名称: ATPase family gene 2 protein homolog A, ATPase family gene 2 protein homolog B, Cyclin-dependent kinase 2-interacting protein, ...
著者Foglizzo, M, Degtjarik, O, Zeqiraj, E.
登録日2023-12-15
公開日2024-03-27
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献The SPATA5-SPATA5L1 ATPase complex directs replisome proteostasis to ensure genome integrity.
Cell, 187, 2024
5IFJ
DownloadVisualize
BU of 5ifj by Molmil
Crystal structure of anti-gliadin 1002-1E01 Fab fragment in complex of peptide PLQPEQPFP
分子名称: 1E01 Fab fragment heavy chain, 1E01 Fab fragment light chain, SULFATE ION, ...
著者Snir, O, Chen, X, Gidoni, M, du Pre, M.F, Zhao, Y, Steinsbo, O, Lundin, K.E, Yaari, G, Sollid, L.M.
登録日2016-02-26
公開日2017-03-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Stereotyped antibody responses target posttranslationally modified gluten in celiac disease.
JCI Insight, 2, 2017
8DEI
DownloadVisualize
BU of 8dei by Molmil
Structure of the Cac1 KER domain
分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, Maltodextrin-binding protein,Chromatin assembly factor 1 subunit p90 fusion, ...
著者Rosas, R, Churchill, M.E.A.
登録日2022-06-20
公開日2023-07-05
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献A novel single alpha-helix DNA-binding domain in CAF-1 promotes gene silencing and DNA damage survival through tetrasome-length DNA selectivity and spacer function.
Elife, 12, 2023
7ACK
DownloadVisualize
BU of 7ack by Molmil
CDK2/cyclin A2 in complex with an imidazo[1,2-c]pyrimidin-5-one inhibitor
分子名称: 1,2-ETHANEDIOL, 8-cyclohexyl-6~{H}-imidazo[1,2-c]pyrimidin-5-one, Cyclin-A2, ...
著者Skerlova, J, Pachl, P, Rezacova, P.
登録日2020-09-11
公開日2021-03-24
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Imidazo[1,2-c]pyrimidin-5(6H)-one inhibitors of CDK2: Synthesis, kinase inhibition and co-crystal structure.
Eur.J.Med.Chem., 216, 2021
7ADU
DownloadVisualize
BU of 7adu by Molmil
Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with magnesium and the INSTI XZ440 (compound 5j)
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DNA (5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*CP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*GP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*A)-3'), ...
著者Pye, V.E, Cherepanov, P.
登録日2020-09-16
公開日2021-03-24
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献HIV-1 Integrase Inhibitors with Modifications That Affect Their Potencies against Drug Resistant Integrase Mutants.
Acs Infect Dis., 7, 2021
5IH8
DownloadVisualize
BU of 5ih8 by Molmil
MELK in complex with NVS-MELK1
分子名称: Maternal embryonic leucine zipper kinase, N-[(pyridin-2-yl)methyl]-4-[4-(pyridin-4-yl)-1H-pyrazol-1-yl]benzamide
著者Sprague, E.R, Puleo, D.E.
登録日2016-02-29
公開日2016-06-01
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Toward the Validation of Maternal Embryonic Leucine Zipper Kinase: Discovery, Optimization of Highly Potent and Selective Inhibitors, and Preliminary Biology Insight.
J.Med.Chem., 59, 2016
2BST
DownloadVisualize
BU of 2bst by Molmil
Crystal structures and KIR3DL1 recognition of three immunodominant viral peptides complexed to HLA-B2705
分子名称: BETA-2-MICROGLOBULIN, HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, B-27 ALPHA CHAIN PRECURSOR, ...
著者Stewart-Jones, G.B.E, diGleria, K, Kollnberger, S, McMichael, A.J, Bowness, P, Jones, E.Y.
登録日2005-05-23
公開日2005-05-24
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structures and Kir3Dl1 Recognition of Three Immunodominant Viral Peptides Complexed to Hla-B2705
Eur.J.Immunol., 35, 2005
8DFZ
DownloadVisualize
BU of 8dfz by Molmil
NMR shows why a small chemical change almost abolishes the antimicrobial activity of GccF
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Bacteriocin glycocin F
著者Harjes, E, Edwards, P.J.B, Norris, G.
登録日2022-06-23
公開日2023-07-05
最終更新日2023-09-13
実験手法SOLUTION NMR
主引用文献NMR Shows Why a Small Chemical Change Almost Abolishes the Antimicrobial Activity of Glycocin F.
Biochemistry, 62, 2023
5LP3
DownloadVisualize
BU of 5lp3 by Molmil
Three tetrameric rings of Isoaspartyl Dipeptidase fitted in an EM volume.
分子名称: Isoaspartyl dipeptidase
著者Garcia-Seisdedos, H, Empereur-Mot, C, Elad, N, Levy, E.D.
登録日2016-08-11
公開日2017-07-26
最終更新日2017-08-23
実験手法ELECTRON MICROSCOPY (10.5 Å)
主引用文献Proteins evolve on the edge of supramolecular self-assembly.
Nature, 548, 2017
2C60
DownloadVisualize
BU of 2c60 by Molmil
crystal structure of human mitogen-activated protein kinase kinase kinase 3 isoform 2 phox domain at 1.25 A resolution
分子名称: CALCIUM ION, GLYCEROL, HUMAN MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 3 ISOFORM 2
著者Debreczeni, J.E, Salah, E, Papagrigoriou, E, Burgess, N, von Delft, F, Gileadi, O, Sundstrom, M, Edwards, A, Arrowsmith, C, Weigelt, J, Knapp, S.
登録日2005-11-04
公開日2005-11-29
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Crystal Structure of Human Mitogen-Activated Protein Kinase Kinase Kinase 3 Isoform 2 Fox Domain at 1.25 A Resolution
To be Published
4A2F
DownloadVisualize
BU of 4a2f by Molmil
Coriolopsis gallica laccase collected at 12.65 keV
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, COPPER (II) ION, LACCASE
著者De la Mora, E, Rudino-Pinera, E.
登録日2011-09-26
公開日2012-04-25
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Changes Caused by Radiation-Induced Reduction and Radiolysis: The Effect of X-Ray Absorbed Dose in a Fungal Multicopper Oxidase
Acta Crystallogr.,Sect.D, 68, 2012
7A10
DownloadVisualize
BU of 7a10 by Molmil
LppS with covalent adduct derived from 1g
分子名称: 4-methoxycyclohexa-2,5-diene-1-thione, L,D-transpeptidase 2
著者Schnell, R, Steiner, E.M.
登録日2020-08-11
公開日2021-04-21
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献N-Thio-beta-lactams targeting L,D-transpeptidase-2, with activity against drug-resistant strains of Mycobacterium tuberculosis.
Cell Chem Biol, 28, 2021
5WW0
DownloadVisualize
BU of 5ww0 by Molmil
Crystal structure of Set7, a novel histone methyltransferase in Schizossacharomyces pombe
分子名称: SET domain-containing protein 7, SULFATE ION
著者Mevius, D.E.H.F, Shen, Y, Morishita, M, Carrozzini, B, Caliandro, R, di Luccio, E.
登録日2016-12-30
公開日2017-12-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Set7 Is a H3K37 Methyltransferase in Schizosaccharomyces pombe and Is Required for Proper Gametogenesis.
Structure, 27, 2019
1C2R
DownloadVisualize
BU of 1c2r by Molmil
MOLECULAR STRUCTURE OF CYTOCHROME C2 ISOLATED FROM RHODOBACTER CAPSULATUS DETERMINED AT 2.5 ANGSTROMS RESOLUTION
分子名称: CYTOCHROME C2, HEME C
著者Benning, M.M, Wesenberg, G, Caffrey, M.S, Bartsch, R.G, Meyer, T.E, Cusanovich, M.A, Rayment, I, Holden, H.M.
登録日1991-03-19
公開日1992-01-15
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Molecular structure of cytochrome c2 isolated from Rhodobacter capsulatus determined at 2.5 A resolution.
J.Mol.Biol., 220, 1991
7A1E
DownloadVisualize
BU of 7a1e by Molmil
LppS with covalent adduct derived from 1c
分子名称: ACETATE ION, L,D-transpeptidase 2, phenylmethanethiol
著者Schnell, R, Steiner, E.M.
登録日2020-08-12
公開日2021-04-21
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献N-Thio-beta-lactams targeting L,D-transpeptidase-2, with activity against drug-resistant strains of Mycobacterium tuberculosis.
Cell Chem Biol, 28, 2021
7A0Z
DownloadVisualize
BU of 7a0z by Molmil
LppS with covalent adduct derived from 1b
分子名称: L,D-transpeptidase 2, TRIS(HYDROXYETHYL)AMINOMETHANE, benzenethiol
著者Schnell, R, Steiner, E.M.
登録日2020-08-11
公開日2021-04-21
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献N-Thio-beta-lactams targeting L,D-transpeptidase-2, with activity against drug-resistant strains of Mycobacterium tuberculosis.
Cell Chem Biol, 28, 2021
8Q8H
DownloadVisualize
BU of 8q8h by Molmil
Crystal Structure of Apo beta-D-GalNAcase from Niabella aurantiaca (Structure 2)
分子名称: SODIUM ION, SULFATE ION, beta-D-GalNAcase from Niabella aurantiaca DSM 17617
著者Morth, J.P, Moreno Prieto, E.S, Siebenhaar, S.
登録日2023-08-18
公開日2024-05-15
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Characterization and structural study of a novel beta-N-acetylgalactosaminidase from Niabella aurantiaca.
Febs J., 291, 2024
7A11
DownloadVisualize
BU of 7a11 by Molmil
LppS with covalent adduct derived from 1E
分子名称: ACETATE ION, L,D-transpeptidase 2, propane-1-thiol
著者Schnell, R, Steiner, E.M.
登録日2020-08-11
公開日2021-04-21
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献N-Thio-beta-lactams targeting L,D-transpeptidase-2, with activity against drug-resistant strains of Mycobacterium tuberculosis.
Cell Chem Biol, 28, 2021
8QQG
DownloadVisualize
BU of 8qqg by Molmil
Structure of BRAF in Complex With Exarafenib (KIN-2787).
分子名称: (3~{S})-~{N}-[4-methyl-3-[2-morpholin-4-yl-6-[[(2~{R})-1-oxidanylpropan-2-yl]amino]pyridin-4-yl]phenyl]-3-[2,2,2-tris(fluoranyl)ethyl]pyrrolidine-1-carboxamide, CHLORIDE ION, Serine/threonine-protein kinase B-raf
著者Schmitt, A, Costanzi, E, Kania, R, Chen, Y.K.
登録日2023-10-04
公開日2024-01-24
実験手法X-RAY DIFFRACTION (2.979 Å)
主引用文献Structure of BRAF in Complex With Exarafenib (KIN-2787).
To Be Published
7A1C
DownloadVisualize
BU of 7a1c by Molmil
LdtMT2 with covalent adduct derived from N-Thio-beta-lactam 1a
分子名称: DIMETHYL SULFOXIDE, L,D-transpeptidase 2
著者Schnell, R, Steiner, E.M.
登録日2020-08-12
公開日2021-04-21
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献N-Thio-beta-lactams targeting L,D-transpeptidase-2, with activity against drug-resistant strains of Mycobacterium tuberculosis.
Cell Chem Biol, 28, 2021
2C7U
DownloadVisualize
BU of 2c7u by Molmil
Conflicting selective forces affect CD8 T-cell receptor contact sites in an HLA-A2 immunodominant HIV epitope.
分子名称: BETA-2-MICROGLOBULIN, GAG PROTEIN, HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, ...
著者Iversen, A.K, Stewart-Jones, G, Learn, G.H, Christie, N, Sylvester-Hviid, C, Armitage, A.E, Kaul, R, Beattie, T, Lee, J.K, Li, Y, Chotiyarnwong, P, Dong, T, Xu, X, Luscher, M.A, MacDonald, K, Ullum, H, Klarlund-Pedersen, B, Skinhoj, P, Fugger, J.L, Buus, S, Mullins, J.I, Jones, E.Y, van der Merwe, P.A, McMichael, A.J.
登録日2005-11-29
公開日2006-03-08
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Conflicting Selective Forces Affect T Cell Receptor Contacts in an Immunodominant Human Immunodeficiency Virus Epitope.
Nat.Immunol., 7, 2006

226414

件を2024-10-23に公開中

PDB statisticsPDBj update infoContact PDBjnumon