PDB: 222415 件ウェブページステータス検索Chemie searchBIRD

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4V8C	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin). 分子名称: 16S ribosomal RNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ... 著者 Jenner, L, Demeshkina, N, Yusupov, M, Yusupova, G. 登録日 2011-12-07 公開日 2014-07-09 最終更新日 2017-11-22 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 A new understanding of the decoding principle on the ribosome. Nature, 484, 2012
4V87	Crystal structure analysis of ribosomal decoding. 分子名称: 16S ribosomal RNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ... 著者 Demeshkina, N, Jenner, L, Yusupov, M, Yusupova, G. 登録日 2011-09-20 公開日 2014-07-09 最終更新日 2014-12-10 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 A new understanding of the decoding principle on the ribosome. Nature, 484, 2012
4V7M	The structures of Capreomycin bound to the 70S ribosome. 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Stanley, R.E, Blaha, G. 登録日 2009-11-12 公開日 2014-07-09 最終更新日 2017-11-22 実験手法 X-RAY DIFFRACTION (3.45 Å) 主引用文献 The structures of the anti-tuberculosis antibiotics viomycin and capreomycin bound to the 70S ribosome. Nat.Struct.Mol.Biol., 17, 2010
4V8I	Crystal structure of YfiA bound to the 70S ribosome. 分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S Ribosomal Protein S10, ... 著者 Polikanov, Y.S, Blaha, G.M, Steitz, T.A. 登録日 2011-12-12 公開日 2014-07-09 最終更新日 2014-12-10 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 How hibernation factors RMF, HPF, and YfiA turn off protein synthesis. Science, 336, 2012
7XVX	Neutron crystal structure of human macrophage migration inhibitory factor 分子名称: Macrophage migration inhibitory factor 著者 Ezawa, T, Tamada, T, Odaka, M, Matsumura, H. 登録日 2022-05-25 公開日 2023-05-31 最終更新日 2024-04-03 実験手法 NEUTRON DIFFRACTION (1.6 Å), X-RAY DIFFRACTION 主引用文献 Neutron crystal structure of human macrophage migration inhibitory factor To Be Published
6ZAB	Structure of the transcriptional repressor Atu1419 (VanR) from agrobacterium fabrum in complex a palindromic DNA (P6422 space group) 分子名称: 1,2-ETHANEDIOL, CITRIC ACID, DI(HYDROXYETHYL)ETHER, ... 著者 Morera, S, Naretto, A, Vigouroux, A, Legrand, P. 登録日 2020-06-05 公開日 2020-12-02 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Characterization of the first tetrameric transcription factor of the GntR superfamily with allosteric regulation from the bacterial pathogen Agrobacterium fabrum. Nucleic Acids Res., 49, 2021
6ZL7	CRYSTAL STRUCTURE OF C173S MUTATION IN THE PMGL2 ESTERASE FROM PERMAFROST METAGENOMIC LIBRARY 分子名称: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, MAGNESIUM ION, PMGL2 著者 Goryaynova, D.A, Boyko, K.M, Nikolaeva, A.Y, Korzhenevskiy, D.A, Kryukova, M.V, Petrovskaya, L.E, Novototskaya-Vlasova, K.A, Rivkina, E.M, Dolgikh, D.A, Kirpichnikov, M.P, Popov, V.O. 登録日 2020-06-30 公開日 2020-07-08 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 CRYSTAL STRUCTURE OF C173S MUTATION IN THE PMGL2 ESTERASE FROM PERMAFROST METAGENOMIC LIBRARY To Be Published
6ZA7	Structure of the apo transcriptional repressor Atu1419 (VanR) from agrobacterium fabrum 分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, SULFATE ION, ... 著者 Morera, S, Vigouroux, A, Legrand, P. 登録日 2020-06-04 公開日 2020-12-02 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.34 Å) 主引用文献 Characterization of the first tetrameric transcription factor of the GntR superfamily with allosteric regulation from the bacterial pathogen Agrobacterium fabrum. Nucleic Acids Res., 49, 2021
6ZDY	Crystal structure of WT murine S100A9 bound to calcium and zinc 分子名称: CALCIUM ION, Protein S100-A9, SULFATE ION, ... 著者 Yatime, L. 登録日 2020-06-15 公開日 2021-01-13 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Divalent cations influence the dimerization mode of murine S100A9 protein by modulating its disulfide bond pattern. J.Struct.Biol., 213, 2020
6ZHK	Crystal structure of adenosylmethionine-8-amino-7-oxononanoate aminotransferase from Methanocaldococcus jannaschii DSM 2661 分子名称: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, MAGNESIUM ION 著者 Boyko, K.M, Nikolaeva, T.N, Stekhanova, T.N, Rakitina, T.V, Bezsudnova, E.Y, Popov, V.O. 登録日 2020-06-23 公開日 2020-07-01 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Three-Dimensional Structure of Thermostable D-Amino Acid Transaminase from the Archaeon Methanocaldococcus jannaschii DSM 2661 Crystallography Reports, 2021
6Z1X	Crystal structure of human steroid carrier protein SL (SCP-2L) mutant V83C 分子名称: OXTOXYNOL-10, Peroxisomal multifunctional enzyme type 2, SULFATE ION 著者 Rozeboom, H.J, Janssen, D.B. 登録日 2020-05-14 公開日 2021-03-03 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.09 Å) 主引用文献 Engineering Thermostability in Artificial Metalloenzymes to Increase Catalytic Activity Acs Catalysis, 11, 2021
4FE9	Crystal Structure of SusF from Bacteroides thetaiotaomicron 分子名称: 1,2-ETHANEDIOL, Cyclic alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-3)-alpha-D-glucopyranose, GLYCEROL, ... 著者 Koropatkin, N.M, Cameron, E.A, Martens, E.C. 登録日 2012-05-29 公開日 2012-08-29 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Multidomain Carbohydrate-binding Proteins Involved in Bacteroides thetaiotaomicron Starch Metabolism. J.Biol.Chem., 287, 2012
4O5C	Structure of human DNA polymerase complexed with N7-MG as the template base in a 1-nucleotide gapped DNA 分子名称: DNA (5'-D(*CP*CP*GP*AP*CP*(FMG)P*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A)-3'), DNA (5'-D(P*GP*TP*CP*GP*G)-3'), ... 著者 Koag, M.C, Lee, S. 登録日 2013-12-19 公開日 2014-07-02 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.363 Å) 主引用文献 Transition-state destabilization reveals how human DNA polymerase beta proceeds across the chemically unstable lesion N7-methylguanine. Nucleic Acids Res., 42, 2014
4O5E	Structure of human DNA polymerase complexed with N7MG in the template base paired with incoming non-hydrolyzable TTP 分子名称: 5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]thymidine, DNA (5'-D(*CP*CP*GP*AP*CP*(FMG)P*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A)-3'), ... 著者 Koag, M.C, Lee, S. 登録日 2013-12-19 公開日 2014-07-02 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.532 Å) 主引用文献 Transition-state destabilization reveals how human DNA polymerase beta proceeds across the chemically unstable lesion N7-methylguanine. Nucleic Acids Res., 42, 2014
4O5K	Structure of human DNA polymerase complexed with N7MG in the template base paired with incoming non-hydrolyzable CTP 分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, DNA (5'-D(*CP*CP*GP*AP*CP*(FMG)P*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A)-3'), ... 著者 Koag, M.C, Lee, S. 登録日 2013-12-19 公開日 2014-07-02 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.058 Å) 主引用文献 Transition-state destabilization reveals how human DNA polymerase beta proceeds across the chemically unstable lesion N7-methylguanine. Nucleic Acids Res., 42, 2014
6ZK8	Native crystal structure of anaerobic F420H2-Oxidase from Methanothermococcus thermolithotrophicus at 1.8A resolution 分子名称: Coenzyme F420H2 oxidase (FprA), DI(HYDROXYETHYL)ETHER, FE (III) ION, ... 著者 Engilberge, S, Wagner, T, Carpentier, P, Girard, E, Shima, S. 登録日 2020-06-30 公開日 2020-11-25 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.83 Å) 主引用文献 Krypton-derivatization highlights O 2 -channeling in a four-electron reducing oxidase. Chem.Commun.(Camb.), 56, 2020
4OVQ	CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM ROSEOBACTER DENITRIFICANS, TARGET EFI-510230, WITH BOUND BETA-D-GLUCURONATE 分子名称: CHLORIDE ION, TRAP dicarboxylate ABC transporter, substrate-binding protein, ... 著者 Vetting, M.W, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Stead, M, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Evans, B, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI) 登録日 2013-12-11 公開日 2014-01-22 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.501 Å) 主引用文献 Experimental strategies for functional annotation and metabolism discovery: targeted screening of solute binding proteins and unbiased panning of metabolomes. Biochemistry, 54, 2015
6Z0K	Crystal structure of laccase from Pediococcus acidilactici Pp5930 (Hepes pH 7.5) 分子名称: 1,2-ETHANEDIOL, COPPER (II) ION, Putative multicopper oxidase mco 著者 Casino, P, Huesa, J, Pardo, I. 登録日 2020-05-09 公開日 2021-03-10 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural analysis and biochemical properties of laccase enzymes from two Pediococcus species. Microb Biotechnol, 14, 2021
6Z0J	Crystal structure of laccase from Pediococcus acidilactici Pa5930 (Tris-HCl pH 8.5) 分子名称: COPPER (II) ION, Putative multicopper oxidase mco 著者 Casino, P, Huesa, J, Pardo, I. 登録日 2020-05-09 公開日 2021-03-10 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural analysis and biochemical properties of laccase enzymes from two Pediococcus species. Microb Biotechnol, 14, 2021
6Z0P	BceF Tyrosine Kinase Domain 分子名称: ADENOSINE-5'-DIPHOSPHATE, BceF 著者 Landau, M, Mayer, M, Abd Alhadi, M, Dvir, H. 登録日 2020-05-10 公開日 2021-04-14 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Structural and Functional Insights into the Biofilm-Associated BceF Tyrosine Kinase Domain from Burkholderia cepacia . Biomolecules, 11, 2021
8UBH	Solution NMR structure of KaiB variant from Thermosynechococcus elongatus vestitus (KaiBTV-4) 分子名称: Circadian oscillation regulator 著者 Ojoawo, A, Wayment-Steele, H.K, Kern, D. 登録日 2023-09-23 公開日 2023-10-25 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Predicting multiple conformations via sequence clustering and AlphaFold2. Nature, 625, 2024
4TW9	Difluoro-dioxolo-benzoimidazol-benzamides as potent inhibitors of CK1delta and epsilon with nanomolar inhibitory activity on cancer cell proliferation 分子名称: CHLORIDE ION, Casein kinase I isoform delta, N-(2,2-difluoro-5H-[1,3]dioxolo[4,5-f]benzimidazol-6-yl)-2-{[2-(trifluoromethoxy)benzoyl]amino}-1,3-thiazole-4-carboxamide, ... 著者 Richter, J, Bischof, J, Zaja, M, Kohlhof, H, Othersen, O, Vitt, D, Alscher, V, Pospiech, I, Garcia-Reyes, B, Berg, S, Leban, J, Knippschild, U. 登録日 2014-06-30 公開日 2014-07-30 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Difluoro-dioxolo-benzoimidazol-benzamides As Potent Inhibitors of CK1 delta and epsilon with Nanomolar Inhibitory Activity on Cancer Cell Proliferation. J.Med.Chem., 57, 2014
4U2S	Cholesterol oxidase in the reduced state complexed with isopropanol 分子名称: Cholesterol oxidase, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, SULFATE ION 著者 Golden, E.A, Vrielink, A. 登録日 2014-07-18 公開日 2014-12-10 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.12 Å) 主引用文献 High-resolution structures of cholesterol oxidase in the reduced state provide insights into redox stabilization. Acta Crystallogr.,Sect.D, 70, 2014
4U43	MAP4K4 in complex with inhibitor (compound 6) 分子名称: Mitogen-activated protein kinase kinase kinase kinase 4, N-(pyridin-3-yl)pyrrolo[2,1-f][1,2,4]triazin-4-amine 著者 Harris, S.F, Wu, P, Coons, M. 登録日 2014-07-23 公開日 2014-09-03 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.18 Å) 主引用文献 Fragment-based identification and optimization of a class of potent pyrrolo[2,1-f][1,2,4]triazine MAP4K4 inhibitors. Bioorg.Med.Chem.Lett., 24, 2014
4U82	Structure of S. aureus undecaprenyl diphosphate synthase in complex with FSPP and sulfate 分子名称: Isoprenyl transferase, MAGNESIUM ION, S-[(2E,6E)-3,7,11-TRIMETHYLDODECA-2,6,10-TRIENYL] TRIHYDROGEN THIODIPHOSPHATE, ... 著者 Zhu, W, Oldfield, E. 登録日 2014-07-31 公開日 2015-02-04 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.66 Å) 主引用文献 Antibacterial drug leads: DNA and enzyme multitargeting. J.Med.Chem., 58, 2015

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