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3Q8L
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Crystal Structure of Human Flap Endonuclease FEN1 (WT) in complex with substrate 5'-flap DNA, SM3+, and K+
分子名称: DNA (5'-D(*AP*CP*CP*GP*TP*CP*C)-3'), DNA (5'-D(*AP*CP*TP*CP*TP*GP*CP*CP*TP*CP*AP*AP*GP*AP*CP*GP*GP*T)-3'), DNA (5'-D(*TP*TP*GP*AP*GP*GP*CP*AP*GP*AP*GP*T)-3'), ...
著者Tsutakawa, S.E, Classen, S, Chapados, B.R, Arvai, A, Finger, D.L, Guenther, G, Tomlinson, C.G, Thompson, P, Sarker, A.H, Shen, B, Cooper, P.K, Grasby, J.A, Tainer, J.A.
登録日2011-01-06
公開日2011-04-27
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.319 Å)
主引用文献Human Flap Endonuclease Structures, DNA Double-Base Flipping, and a Unified Understanding of the FEN1 Superfamily.
Cell(Cambridge,Mass.), 145, 2011
4ZNC
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Fc fragment of human IgG in complex with the C domain of staphylococcal protein A mutant - Q9W
分子名称: Ig gamma-3 chain C region, Immunoglobulin G-binding protein A
著者Deis, L.N, Oas, T.G.
登録日2015-05-04
公開日2015-07-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Suppression of conformational heterogeneity at a protein-protein interface.
Proc.Natl.Acad.Sci.USA, 112, 2015
7RTN
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BU of 7rtn by Molmil
Cryo-EM structure of bluetongue virus capsid protein VP5 at low endosomal pH
分子名称: Outer capsid protein VP5
著者Xia, X, Wu, W.N, Cui, Y.X, Roy, P, Zhou, Z.H.
登録日2021-08-13
公開日2021-11-03
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Bluetongue virus capsid protein VP5 perforates membranes at low endosomal pH during viral entry.
Nat Microbiol, 6, 2021
7RTO
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BU of 7rto by Molmil
Cryo-EM structure of bluetongue virus capsid protein VP5 at low endosomal pH intermediate state 2
分子名称: Outer capsid protein VP5
著者Xia, X, Wu, W.N, Cui, Y.X, Roy, P, Zhou, Z.H.
登録日2021-08-13
公開日2021-11-03
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Bluetongue virus capsid protein VP5 perforates membranes at low endosomal pH during viral entry.
Nat Microbiol, 6, 2021
2GEJ
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BU of 2gej by Molmil
Crystal Structure of phosphatidylinositol mannosyltransferase (PimA) from Mycobacterium smegmatis in complex with GDP-Man
分子名称: GUANOSINE-5'-DIPHOSPHATE-ALPHA-D-MANNOSE, PHOSPHATIDYLINOSITOL MANNOSYLTRANSFERASE (PimA)
著者Guerin, M.E, Buschiazzo, A, Kordulakova, J, Jackson, M, Alzari, P.M.
登録日2006-03-20
公開日2007-04-03
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Molecular recognition and interfacial catalysis by the essential phosphatidylinositol mannosyltransferase PimA from mycobacteria.
J.Biol.Chem., 282, 2007
3IR2
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BU of 3ir2 by Molmil
Crystal structure of the APOBEC3G catalytic domain
分子名称: CHLORIDE ION, DNA dC->dU-editing enzyme APOBEC-3G, MAGNESIUM ION, ...
著者Shandilya, S.M.D, Schiffer, C.A.
登録日2009-08-21
公開日2010-01-12
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal Structure of the APOBEC3G Catalytic Domain Reveals Potential Oligomerization Interfaces.
Structure, 18, 2010
4QQP
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Crystal structure of C1QL3 mutant D207A
分子名称: CADMIUM ION, Complement C1q-like protein 3
著者Ressl, S, Brunger, A.T.
登録日2014-06-27
公開日2015-04-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.464 Å)
主引用文献Structures of C1q-like Proteins Reveal Unique Features among the C1q/TNF Superfamily.
Structure, 23, 2015
4QQO
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Crystal structure of C1QL3 mutant D205A
分子名称: Complement C1q-like protein 3, MAGNESIUM ION
著者Ressl, S, Brunger, A.T.
登録日2014-06-27
公開日2015-04-22
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.031 Å)
主引用文献Structures of C1q-like Proteins Reveal Unique Features among the C1q/TNF Superfamily.
Structure, 23, 2015
4QQL
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Crystal structure of C1QL3 in P1 space group
分子名称: Complement C1q-like protein 3, MAGNESIUM ION
著者Ressl, S, Brunger, A.T.
登録日2014-06-27
公開日2015-04-22
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Structures of C1q-like Proteins Reveal Unique Features among the C1q/TNF Superfamily.
Structure, 23, 2015
1OIH
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BU of 1oih by Molmil
Crystal structure of the alkylsulfatase AtsK, a non-heme Fe(II) alphaketoglutarate dependent Dioxygenase
分子名称: PUTATIVE ALKYLSULFATASE ATSK, SODIUM ION
著者Mueller, I, Kahnert, A, Pape, T, Dierks, T, Meyer-Klauke, W, Kertesz, M, Uson, I.
登録日2003-06-18
公開日2004-03-30
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Crystal Structure of the Alkylsulfatase Atsk: Insights Into the Catalytic Mechanism of the Fe(II) -Ketoglutarate-Dependent Dioxygenase Superfamily
Biochemistry, 42, 2004
4AWN
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BU of 4awn by Molmil
Structure of recombinant human DNase I (rhDNaseI) in complex with Magnesium and Phosphate.
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Parsiegla, G, Noguere, C, Santell, L, Lazarus, R.A, Bourne, Y.
登録日2012-06-04
公開日2013-01-09
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献The Structure of Human DNase I Bound to Magnesium and Phosphate Ions Points to a Catalytic Mechanism Common to Members of the DNase I-Like Superfamily.
Biochemistry, 51, 2012
4QPY
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BU of 4qpy by Molmil
Crystal structure of C1QL2
分子名称: Complement C1q-like protein 2
著者Ressl, S, Brunger, A.T.
登録日2014-06-25
公開日2015-04-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.384 Å)
主引用文献Structures of C1q-like Proteins Reveal Unique Features among the C1q/TNF Superfamily.
Structure, 23, 2015
4QQH
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BU of 4qqh by Molmil
Crystal structure of C1QL3 in space group H32
分子名称: CADMIUM ION, Complement C1q-like protein 3
著者Ressl, S, Brunger, A.T.
登録日2014-06-27
公開日2015-04-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Structures of C1q-like Proteins Reveal Unique Features among the C1q/TNF Superfamily.
Structure, 23, 2015
1BL4
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BU of 1bl4 by Molmil
FKBP MUTANT F36V COMPLEXED WITH REMODELED SYNTHETIC LIGAND
分子名称: PROTEIN (FK506 BINDING PROTEIN), {3-[3-(3,4-DIMETHOXY-PHENYL)-1-(1-{1-[2-(3,4,5-TRIMETHOXY-PHENYL)-BUTYRYL]-PIPERIDIN-2YL}-VINYLOXY)-PROPYL]-PHENOXY}-ACETIC ACID
著者Hatada, M.H, Clackson, T, Yang, W, Rozamus, L.W, Amara, J, Rollins, C.T, Stevenson, L.F, Magari, S.R, Wood, S.A, Courage, N.L, Lu, X, Cerasoli Junior, F, Gilman, M, Holt, D.
登録日1998-07-23
公開日1998-09-02
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Redesigning an FKBP-ligand interface to generate chemical dimerizers with novel specificity.
Proc.Natl.Acad.Sci.USA, 95, 1998
7AK9
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BU of 7ak9 by Molmil
Structure of Salmonella TacT3 toxin bound to TacA3 antitoxin C-terminal peptide
分子名称: ABC transporter, Acetyltransferase, DEPHOSPHO COENZYME A
著者Grabe, G.J, Morgan, R.M.L, Hare, S.A, Helaine, S.
登録日2020-09-30
公開日2021-08-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Auxiliary interfaces support the evolution of specific toxin-antitoxin pairing.
Nat.Chem.Biol., 17, 2021
7AK7
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BU of 7ak7 by Molmil
Structure of Salmonella TacT2 toxin bound to TacA2 antitoxin
分子名称: ACETYL COENZYME *A, Acetyltransferase, CHLORIDE ION, ...
著者Grabe, G.J, Morgan, R.M.L, Hare, S.A, Helaine, S.
登録日2020-09-30
公開日2021-08-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Auxiliary interfaces support the evolution of specific toxin-antitoxin pairing.
Nat.Chem.Biol., 17, 2021
7AK8
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BU of 7ak8 by Molmil
Structure of Salmonella TacT1 toxin bound to TacA1 antitoxin C-terminal peptide
分子名称: ACETYL COENZYME *A, GCN5 family acetyltransferase, GLYCEROL, ...
著者Grabe, G.J, Morgan, R.M.L, Helaine, S, Hare, S.A.
登録日2020-09-30
公開日2021-08-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Auxiliary interfaces support the evolution of specific toxin-antitoxin pairing.
Nat.Chem.Biol., 17, 2021
4QQ2
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BU of 4qq2 by Molmil
Crystal structure of C1QL1
分子名称: C1q-related factor, CADMIUM ION
著者Ressl, S, Brunger, A.T.
登録日2014-06-26
公開日2015-04-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献Structures of C1q-like Proteins Reveal Unique Features among the C1q/TNF Superfamily.
Structure, 23, 2015
1XXM
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BU of 1xxm by Molmil
The modular architecture of protein-protein binding site
分子名称: Beta-lactamase TEM, Beta-lactamase inhibitory protein, CALCIUM ION
著者Reichmann, D, Rahat, O, Albeck, S, Meged, R, Dym, O, Schreiber, G, Israel Structural Proteomics Center (ISPC)
登録日2004-11-07
公開日2005-01-18
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The modular architecture of protein-protein binding interfaces
Proc.Natl.Acad.Sci.USA, 102, 2005
3Q8M
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BU of 3q8m by Molmil
Crystal Structure of Human Flap Endonuclease FEN1 (D181A) in complex with substrate 5'-flap DNA and K+
分子名称: DNA (5'-D(*AP*CP*CP*GP*TP*CP*C)-3'), DNA (5'-D(*AP*CP*TP*CP*TP*GP*CP*CP*TP*CP*AP*AP*GP*AP*CP*GP*GP*T)-3'), DNA (5'-D(*TP*TP*GP*AP*GP*GP*CP*AP*GP*AP*GP*T)-3'), ...
著者Tsutakawa, S.E, Classen, S, Chapados, B.R, Arvai, A, Finger, D.L, Guenther, G, Tomlinson, C.G, Thompson, P, Sarker, A.H, Shen, B, Cooper, P.K, Grasby, J.A, Tainer, J.A.
登録日2011-01-06
公開日2011-04-27
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Human Flap Endonuclease Structures, DNA Double-Base Flipping, and a Unified Understanding of the FEN1 Superfamily.
Cell(Cambridge,Mass.), 145, 2011
5CCV
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BU of 5ccv by Molmil
Crystal structure of full-length NS5 from dengue virus type 3
分子名称: RNA-directed RNA polymerase NS5, S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION
著者Klema, V.J, Choi, K.H.
登録日2015-07-02
公開日2016-02-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Dengue Virus Nonstructural Protein 5 (NS5) Assembles into a Dimer with a Unique Methyltransferase and Polymerase Interface.
Plos Pathog., 12, 2016
4DNN
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BU of 4dnn by Molmil
Crystal structure of the Quaking Qua1 homodimerization domain
分子名称: CALCIUM ION, Protein quaking
著者Beuck, C, Qu, S, Williamson, J.R.
登録日2012-02-08
公開日2012-09-12
最終更新日2012-10-17
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Analysis of the Quaking Homodimerization Interface.
J.Mol.Biol., 423, 2012
4DHD
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BU of 4dhd by Molmil
Crystal structure of isoprenoid synthase A3MSH1 (TARGET EFI-501992) from Pyrobaculum calidifontis
分子名称: ACETATE ION, CHLORIDE ION, PHOSPHATE ION, ...
著者Patskovsky, Y, Toro, R, Bhosle, R, Hillerich, B, Seidel, R.D, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Zencheck, W.D, Imker, H.J, Poulter, C.D, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
登録日2012-01-27
公開日2012-02-08
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Prediction of function for the polyprenyl transferase subgroup in the isoprenoid synthase superfamily.
Proc.Natl.Acad.Sci.USA, 110, 2013
3Q8K
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BU of 3q8k by Molmil
Crystal Structure of Human Flap Endonuclease FEN1 (WT) in complex with product 5'-flap DNA, SM3+, and K+
分子名称: DNA (5'-D(*AP*CP*CP*GP*TP*CP*C)-3'), DNA (5'-D(*AP*CP*TP*CP*TP*GP*CP*CP*TP*CP*AP*AP*GP*AP*CP*GP*GP*T)-3'), DNA (5'-D(P*TP*GP*AP*GP*GP*CP*AP*GP*AP*GP*T)-3'), ...
著者Tsutakawa, S.E, Classen, S, Chapados, B.R, Arvai, A, Finger, D.L, Guenther, G, Tomlinson, C.G, Thompson, P, Sarker, A.H, Shen, B, Cooper, P.K, Grasby, J.A, Tainer, J.A.
登録日2011-01-06
公開日2011-04-27
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.2001 Å)
主引用文献Human Flap Endonuclease Structures, DNA Double-Base Flipping, and a Unified Understanding of the FEN1 Superfamily.
Cell(Cambridge,Mass.), 145, 2011
3DJB
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Crystal structure of a HD-superfamily hydrolase (BT9727_1981) from Bacillus thuringiensis, Northeast Structural Genomics Consortium Target BuR114
分子名称: Hydrolase, HD family, MAGNESIUM ION
著者Forouhar, F, Su, M, Seetharaman, J, Vorobiev, S.M, Janjua, H, Fang, Y, Xiao, R, Cunningham, K, Maglaqui, M, Owen, L.A, Wang, D, Baran, M.C, Liu, J, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2008-06-23
公開日2008-08-19
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structure of a HD-superfamily hydrolase (BT9727_1981) from Bacillus thuringiensis, Northeast Structural Genomics Consortium Target BuR114
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