PDB: 1500 件ウェブページステータス検索Chemie searchBIRD

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7BTC	Crystal structure of Rheb Y35N mutant bound to GDP 分子名称: GTP-binding protein Rheb, GUANOSINE-5'-DIPHOSPHATE 著者 Zhang, C, Zhang, T, Ding, J. 登録日 2020-04-01 公開日 2020-06-17 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.101 Å) 主引用文献 Molecular basis for the functions of dominantly active Y35N and inactive D60K Rheb mutants in mTORC1 signaling. J Mol Cell Biol, 12, 2020
7BTB	Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.22 Angstroms resolution(state R2) 分子名称: 60S ribosomal protein L11-A, 60S ribosomal protein L13-A, 60S ribosomal protein L14-A, ... 著者 Li, Y, Wilson, D.M. 登録日 2020-04-01 公開日 2020-10-28 実験手法 ELECTRON MICROSCOPY (3.22 Å) 主引用文献 Structural insights into assembly of the ribosomal nascent polypeptide exit tunnel. Nat Commun, 11, 2020
7BTD	Crystal structure of Rheb Y35N mutant bound to GppNHp 分子名称: GTP-binding protein Rheb, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER 著者 Zhang, C, Zhang, T, Ding, J. 登録日 2020-04-01 公開日 2020-06-17 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Molecular basis for the functions of dominantly active Y35N and inactive D60K Rheb mutants in mTORC1 signaling. J Mol Cell Biol, 12, 2020
6ZP4	SARS-CoV-2 Nsp1 bound to a human 43S preinitiation ribosome complex - state 2 分子名称: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ... 著者 Thoms, M, Buschauer, R, Ameismeier, M, Denk, T, Kratzat, H, Mackens-Kiani, T, Cheng, J, Berninghausen, O, Becker, T, Beckmann, R. 登録日 2020-07-08 公開日 2020-07-29 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Structural basis for translational shutdown and immune evasion by the Nsp1 protein of SARS-CoV-2. Science, 369, 2020
7B7D	Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs 分子名称: 18S rRNA, 25S rRNA, 40S ribosomal protein S0-A, ... 著者 Ranjan, N, Pochopien, A.A, Wu, C.C, Beckert, B, Blanchet, S, Green, R, Rodnina, M.V, Wilson, D.N. 登録日 2020-12-10 公開日 2021-03-10 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 eEF3 promotes late stages of tRNA translocation including E-tRNA release from the ribosome To Be Published
2JUC	URN1 FF domain yeast 分子名称: Pre-mRNA-splicing factor URN1 著者 Bonet, R, Ramirez-Espain, X, Macias, M.J. 登録日 2007-08-21 公開日 2008-06-17 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Solution structure of the yeast URN1 splicing factor FF domain: Comparative analysis of charge distributions in FF domain structures-FFs and SURPs, two domains with a similar fold. Proteins, 73, 2008
5EN6	Crystal structure of the Smu1-RED complex (SeMet) of Caenorhabditis elegans 分子名称: SMU-1, Suppressor of Mec and Unc defects 著者 Ulrich, A.K.C, Wahl, M.C. 登録日 2015-11-09 公開日 2016-04-20 実験手法 X-RAY DIFFRACTION (3.103 Å) 主引用文献 Crystal structure of the Smu1-RED complex (SeMet) of Caenorhabditis elegans to be published
5EN7	Crystal structure of the Smu1-RED complex (native) of Caenorhabditis elegans. 分子名称: SMU-1, Suppressor of Mec and Unc defects 著者 Ulrich, A.K.C, Wahl, M.C. 登録日 2015-11-09 公開日 2016-04-20 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.936 Å) 主引用文献 splicing factor to be published
2IF1	HUMAN TRANSLATION INITIATION FACTOR EIF1, NMR, 29 STRUCTURES 分子名称: EIF1 著者 Fletcher, C.M, Hellen, C.U.T, Pestova, T.V, Wagner, G. 登録日 1998-08-04 公開日 1999-05-18 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Structure and interactions of the translation initiation factor eIF1. EMBO J., 18, 1999
5H1L	Crystal structure of WD40 repeat domains of Gemin5 in complex with 7-nt U4 snRNA fragment 分子名称: GLYCEROL, Gem-associated protein 5, U4 snRNA (5'-R(*AP*UP*UP*UP*UP*UP*G)-3') 著者 Jin, W, Wang, Y, Liu, C.P, Yang, N, Jin, M, Cong, Y, Wang, M, Xu, R.M. 登録日 2016-10-10 公開日 2016-11-23 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural basis for snRNA recognition by the double-WD40 repeat domain of Gemin5 Genes Dev., 30, 2016
5H1M	Crystal structure of WD40 repeat domains of Gemin5 in complex with M7G 分子名称: 7N-METHYL-8-HYDROGUANOSINE-5'-DIPHOSPHATE, Gem-associated protein 5 著者 Jin, W, Wang, Y, Liu, C.P, Yang, N, Jin, M, Cong, Y, Wang, M, Xu, R.M. 登録日 2016-10-10 公開日 2016-11-23 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.492 Å) 主引用文献 Structural basis for snRNA recognition by the double-WD40 repeat domain of Gemin5 Genes Dev., 30, 2016
2KEZ	NMR structure of U6 ISL at pH 8.0 分子名称: RNA (5'-R(*GP*GP*UP*UP*CP*CP*CP*CP*UP*GP*CP*AP*UP*AP*AP*GP*GP*AP*UP*GP*AP*AP*CP*C)-3') 著者 Venditti, V, Butcher, S.E. 登録日 2009-02-08 公開日 2009-07-21 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Minimum-energy path for a u6 RNA conformational change involving protonation, base-pair rearrangement and base flipping. J.Mol.Biol., 391, 2009
5H1K	Crystal structure of WD40 repeat domains of Gemin5 in complex with 13-nt U4 snRNA fragment 分子名称: Gem-associated protein 5, U4 snRNA (5'-R(*GP*CP*AP*AP*UP*UP*UP*UP*UP*GP*AP*CP*A)-3') 著者 Wang, Y, Jin, W, Liu, C.P, Yang, N, Jin, M, Cong, Y, Wang, M, Xu, R.M. 登録日 2016-10-10 公開日 2016-11-23 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural basis for snRNA recognition by the double-WD40 repeat domain of Gemin5 Genes Dev., 30, 2016
5GVS	Crystal structure of the DDX41 DEAD domain in an apo open form 分子名称: Probable ATP-dependent RNA helicase DDX41 著者 Omura, H, Oikawa, D, Nakane, T, Kato, M, Ishii, R, Goto, Y, Suga, H, Ishitani, R, Tokunaga, F, Nureki, O. 登録日 2016-09-06 公開日 2016-10-19 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural and Functional Analysis of DDX41: a bispecific immune receptor for DNA and cyclic dinucleotide Sci Rep, 6, 2016
5GVR	Crystal structure of the DDX41 DEAD domain in an apo closed form 分子名称: (2S)-2-hydroxybutanedioic acid, Probable ATP-dependent RNA helicase DDX41 著者 Omura, H, Oikawa, D, Nakane, T, Kato, M, Ishii, R, Goto, Y, Suga, H, Ishitani, R, Tokunaga, F, Nureki, O. 登録日 2016-09-06 公開日 2016-10-19 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Structural and Functional Analysis of DDX41: a bispecific immune receptor for DNA and cyclic dinucleotide Sci Rep, 6, 2016
2K8G	Solution structure of RRM2 domain of PABP1 分子名称: Polyadenylate-binding protein 1 著者 Barsukov, I, Parnham, S. 登録日 2008-09-09 公開日 2009-10-06 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution structure of RRM2 domain of PABP1 To be Published
5FCI	Structure of the vacant uL3 W255C mutant 80S yeast ribosome 分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ... 著者 Mailliot, J, Garreau de Loubresse, N, Yusupova, G, Dinman, J.D, Yusupov, M. 登録日 2015-12-15 公開日 2016-05-11 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Crystal Structures of the uL3 Mutant Ribosome: Illustration of the Importance of Ribosomal Proteins for Translation Efficiency. J.Mol.Biol., 428, 2016
2KF0	NMR structure of U6 ISL at pH 7.0 分子名称: RNA (5'-R(*GP*GP*UP*UP*CP*CP*CP*CP*UP*GP*CP*AP*UP*AP*AP*GP*GP*AP*UP*GP*AP*AP*CP*C)-3') 著者 Venditti, V, Butcher, S.E. 登録日 2009-02-08 公開日 2009-07-21 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Minimum-energy path for a u6 RNA conformational change involving protonation, base-pair rearrangement and base flipping. J.Mol.Biol., 391, 2009
2KG1	Structure of the third qRRM domain of hnRNP F in complex with a AGGGAU G-tract RNA 分子名称: 5'-R(*AP*GP*GP*GP*AP*U)-3', Heterogeneous nuclear ribonucleoprotein F 著者 Allain, F.H.T, Dominguez, C. 登録日 2009-03-02 公開日 2010-06-09 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Structural basis of G-tract recognition and encaging by hnRNP F quasi-RRMs. Nat.Struct.Mol.Biol., 17, 2010
2KG0	Structure of the second qRRM domain of hnRNP F in complex with a AGGGAU G-tract RNA 分子名称: 5'-R(*AP*GP*GP*GP*AP*U)-3', Heterogeneous nuclear ribonucleoprotein F 著者 Allain, F.H.T, Dominguez, C. 登録日 2009-03-02 公開日 2010-06-09 最終更新日 2024-05-08 実験手法 SOLUTION NMR 主引用文献 Structural basis of G-tract recognition and encaging by hnRNP F quasi-RRMs. Nat.Struct.Mol.Biol., 17, 2010
5FJA	Cryo-EM structure of yeast RNA polymerase III at 4.7 A 分子名称: DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC1, DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC10, DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC2, ... 著者 Hoffmann, N.A, Jakobi, A.J, Moreno-Morcillo, M, Glatt, S, Kosinski, J, Hagen, W.J, Sachse, C, Muller, C.W. 登録日 2015-10-06 公開日 2015-11-25 最終更新日 2017-08-02 実験手法 ELECTRON MICROSCOPY (4.65 Å) 主引用文献 Molecular Structures of Unbound and Transcribing RNA Polymerase III. Nature, 528, 2015
5H1Y	Crystal structure of the DDX41 DEAD domain in complex with SO42- and Mg2+ 分子名称: MAGNESIUM ION, Probable ATP-dependent RNA helicase DDX41, SULFATE ION 著者 Jiang, Y, Ouyang, S, Liu, Z.J. 登録日 2016-10-13 公開日 2017-01-18 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.26 Å) 主引用文献 Structural and functional analyses of human DDX41 DEAD domain Protein Cell, 8, 2017
5FCJ	Structure of the anisomycin-containing uL3 W255C mutant 80S yeast ribosome 分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ... 著者 Mailliot, J, Garreau de Loubresse, N, Yusupova, G, Dinman, J.D, Yusupov, M. 登録日 2015-12-15 公開日 2016-05-11 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Crystal Structures of the uL3 Mutant Ribosome: Illustration of the Importance of Ribosomal Proteins for Translation Efficiency. J.Mol.Biol., 428, 2016
2KFY	NMR structure of the first qRRM of hnRNP F in complex with AGGGAU G-tract RNA 分子名称: 5'-R(*AP*GP*GP*GP*AP*U)-3', Heterogeneous nuclear ribonucleoprotein F 著者 Allain, F.H.T, Dominguez, C. 登録日 2009-03-02 公開日 2010-06-09 最終更新日 2024-05-08 実験手法 SOLUTION NMR 主引用文献 Structural basis of G-tract recognition and encaging by hnRNP F quasi-RRMs. Nat.Struct.Mol.Biol., 17, 2010
2KH9	Solution structure of yeast Prp24-RRM2 bound to a fragment of U6 RNA 分子名称: 5'-R(*AP*GP*AP*GP*AP*U)-3', U4/U6 snRNA-associated-splicing factor PRP24 著者 Martin-Tumasz, S.A, Butcher, S.E. 登録日 2009-03-27 公開日 2010-03-09 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Structure and functional implications of a complex containing a segment of U6 RNA bound by a domain of Prp24. Rna, 16, 2010

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