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5TVP
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SUMO2 bound to Mouse Tdp2 catalytic domain with a 5'-phosphorylated DNA ternary complex
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DNA (5'-D(P*CP*CP*GP*AP*AP*TP*TP*CP*G)-3'), ...
著者Schellenberg, M.J, Williams, R.S.
登録日2016-11-09
公開日2017-10-11
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.399 Å)
主引用文献ZATT (ZNF451)-mediated resolution of topoisomerase 2 DNA-protein cross-links.
Science, 357, 2017
5TVQ
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BU of 5tvq by Molmil
Mouse Tdp2 catalytic domain bound to SUMO2
分子名称: ACETATE ION, CALCIUM ION, Small ubiquitin-related modifier 2, ...
著者Schellenberg, M.J, Williams, R.S.
登録日2016-11-09
公開日2017-09-27
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献ZATT (ZNF451)-mediated resolution of topoisomerase 2 DNA-protein cross-links.
Science, 357, 2017
5TVR
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BU of 5tvr by Molmil
JMJD2A in complex with Ni(II) and alpha-Ketoglutarate
分子名称: 2-OXOGLUTARIC ACID, Lysine-specific demethylase 4A, NICKEL (II) ION, ...
著者Cascella, B, Lee, S.G, Jez, J.M.
登録日2016-11-09
公開日2017-02-01
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.093 Å)
主引用文献The small molecule JIB-04 disrupts O2 binding in the Fe-dependent histone demethylase KDM4A/JMJD2A.
Chem. Commun. (Camb.), 53, 2017
5TVS
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BU of 5tvs by Molmil
JMJD2A in complex with Ni(II)
分子名称: Lysine-specific demethylase 4A, NICKEL (II) ION, ZINC ION
著者Cascella, B, Lee, S.G, Jez, J.M.
登録日2016-11-09
公開日2017-02-01
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.745 Å)
主引用文献The small molecule JIB-04 disrupts O2 binding in the Fe-dependent histone demethylase KDM4A/JMJD2A.
Chem. Commun. (Camb.), 53, 2017
5TVT
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BU of 5tvt by Molmil
Structure of Maternal Embryonic Leucine Zipper Kinase
分子名称: 9-(3,5-dichloro-4-hydroxyphenyl)-1-{trans-4-[(dimethylamino)methyl]cyclohexyl}-3-methyl-3,4-dihydropyrimido[5,4-c][1,5]naphthyridin-2(1H)-one, Maternal embryonic leucine zipper kinase
著者Seo, H.-Y, Huang, H, Gray, N.S, Dhe-Paganon, S.
登録日2016-11-10
公開日2017-11-15
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Structure of Maternal Embryonic Leucine Zipper Kinase
To Be Published
5TVU
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BU of 5tvu by Molmil
Crystal structure of mitochondrial Hsp90 (TRAP1) with ATP in absence of Mg
分子名称: ADENOSINE-5'-TRIPHOSPHATE, TNF receptor-associated protein 1
著者Elnatan, D, Betegon, M, Agard, D.A.
登録日2016-11-10
公開日2018-03-14
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Symmetry broken and rebroken during the ATP hydrolysis cycle of the mitochondrial Hsp90 TRAP1.
Elife, 6, 2017
5TVV
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BU of 5tvv by Molmil
Computationally Designed Fentanyl Binder - Fen49* Apo
分子名称: Endo-1,4-beta-xylanase A, POTASSIUM ION
著者Bick, M.J, Greisen, P.J, Morey, K.J, Antunes, A.S, La, D, Sankaran, B, Reymond, L, Johnsson, K, Medford, J.I, Baker, D.
登録日2016-11-10
公開日2017-10-04
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Computational design of environmental sensors for the potent opioid fentanyl.
Elife, 6, 2017
5TVW
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BU of 5tvw by Molmil
Crystal structure of mitochondrial Hsp90 (TRAP1) with ATP in absence of Mg, hemi-hydrolyzed
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, COBALT (II) ION, ...
著者Elnatan, D, Betegon, M, Agard, D.A, Northeast Structural Genomics Consortium (NESG)
登録日2016-11-10
公開日2018-03-14
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Symmetry broken and rebroken during the ATP hydrolysis cycle of the mitochondrial Hsp90 TRAP1.
Elife, 6, 2017
5TVX
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BU of 5tvx by Molmil
Crystal structure of mitochondrial Hsp90 (TRAP1) with ATP in absence of Mg, fully hydrolyzed
分子名称: ADENOSINE-5'-DIPHOSPHATE, TNF receptor-associated protein 1
著者Elnatan, D, Betegon, M, Agard, D.A.
登録日2016-11-10
公開日2017-10-25
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Symmetry broken and rebroken during the ATP hydrolysis cycle of the mitochondrial Hsp90 TRAP1.
Elife, 6, 2017
5TVY
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BU of 5tvy by Molmil
Computationally Designed Fentanyl Binder - Fen49
分子名称: 3,6,9,12,15,18,21,24,27-NONAOXANONACOSANE-1,29-DIOL, Endo-1,4-beta-xylanase A
著者Bick, M.J, Greisen, P.J, Morey, K.J, Antunes, M.S, La, D, Sankaran, B, Reymond, L, Johnsson, K, Medford, J.I, Baker, D.
登録日2016-11-10
公開日2017-10-04
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Computational design of environmental sensors for the potent opioid fentanyl.
Elife, 6, 2017
5TVZ
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BU of 5tvz by Molmil
Solution NMR structure of Saccharomyces cerevisiae Pom152 Ig-like repeat, residues 718-820
分子名称: Nucleoporin POM152
著者Dutta, K, Sampathkumar, P, Cowburn, D, Almo, S.C, Rout, M.P, Fernandez-Martinez, J.
登録日2016-11-10
公開日2017-02-22
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Molecular Architecture of the Major Membrane Ring Component of the Nuclear Pore Complex.
Structure, 25, 2017
5TW0
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BU of 5tw0 by Molmil
Structure of Pfp1 protease from Thermococcus thioreducens: small cell H3 crystal form
分子名称: Peptidase
著者Larson, S.B, McPherson, A.
登録日2016-11-10
公開日2017-09-13
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献The structure of the Pfp1 protease from the hyperthermophilic archaeon Thermococcus thioreducens in two crystal forms.
Acta Crystallogr D Struct Biol, 73, 2017
5TW1
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BU of 5tw1 by Molmil
Crystal structure of a Mycobacterium smegmatis transcription initiation complex with RbpA
分子名称: 1,2-ETHANEDIOL, DNA (26-MER), DNA (31-MER), ...
著者Hubin, E.A, Darst, S.A, Campbell, E.A.
登録日2016-11-10
公開日2017-01-18
最終更新日2024-12-25
実験手法X-RAY DIFFRACTION (2.76 Å)
主引用文献Structure and function of the mycobacterial transcription initiation complex with the essential regulator RbpA.
Elife, 6, 2017
5TW2
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BU of 5tw2 by Molmil
Structure of mouse CD1d with bound alpha-galactosylsphingamide JG168
分子名称: (5R,6S,7S)-5,6-dihydroxy-7-(octanoylamino)-N-(6-phenylhexyl)-8-{[(2S,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl]oxy}octanamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Zajonc, D.M, Wang, J.
登録日2016-11-11
公開日2017-09-20
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Galactosylsphingamides: new alpha-GalCer analogues to probe the F'-pocket of CD1d.
Sci Rep, 7, 2017
5TW3
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BU of 5tw3 by Molmil
Crystal Structure of HIV-1 Reverse Transcriptase in Complex with 5-(2-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)-4-fluorophenoxy)-7-fluoro-2-naphthonitrile (JLJ636), a Non-nucleoside Inhibitor
分子名称: 5-{2-[2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]-4-fluorophenoxy}-7-fluoronaphthalene-2-carbonitrile, HIV-1 REVERSE TRANSCRIPTASE, P51 SUBUNIT, ...
著者Chan, A.H, Anderson, K.S.
登録日2016-11-11
公開日2017-03-15
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.853 Å)
主引用文献Structural and Preclinical Studies of Computationally Designed Non-Nucleoside Reverse Transcriptase Inhibitors for Treating HIV infection.
Mol. Pharmacol., 91, 2017
5TW4
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BU of 5tw4 by Molmil
Crystal structure of S. aureus penicillin binding protein 4 (PBP4) mutant (E183A, F241R) in complex with ceftaroline
分子名称: CHLORIDE ION, Ceftaroline, bound form, ...
著者Alexander, J.A.N, Strynadka, N.C.J.
登録日2016-11-11
公開日2018-05-16
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Structural and kinetic analysis of penicillin-binding protein 4 (PBP4)-mediated antibiotic resistance inStaphylococcus aureus.
J. Biol. Chem., 2018
5TW5
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BU of 5tw5 by Molmil
Structure of mouse CD1d with bound glycosphingolipid JJ112
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen-presenting glycoprotein CD1d1, ...
著者Zajonc, D.M, Wang, J.
登録日2016-11-11
公開日2017-09-20
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Galactosylsphingamides: new alpha-GalCer analogues to probe the F'-pocket of CD1d.
Sci Rep, 7, 2017
5TW6
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BU of 5tw6 by Molmil
CTX-M-14 P167S:E166A mutant with acylated ceftazidime molecule
分子名称: 1,2-ETHANEDIOL, ACYLATED CEFTAZIDIME, Beta-lactamase
著者Patel, M, Stojanoski, V, Sankaran, B, Prasad, B.V.V, Palzkill, T.
登録日2016-11-11
公開日2017-06-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The Drug-Resistant Variant P167S Expands the Substrate Profile of CTX-M beta-Lactamases for Oxyimino-Cephalosporin Antibiotics by Enlarging the Active Site upon Acylation.
Biochemistry, 56, 2017
5TW7
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BU of 5tw7 by Molmil
Crystal structure of a GMP synthase (glutamine-hydrolyzing) from Neisseria gonorrhoeae
分子名称: GMP synthase [glutamine-hydrolyzing], MAGNESIUM ION
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2016-11-11
公開日2016-11-23
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal structure of a GMP synthase (glutamine-hydrolyzing) from Neisseria gonorrhoeae
To be Published
5TW8
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BU of 5tw8 by Molmil
Crystal structure of wild-type S. aureus penicillin binding protein 4 (PBP4) in complex with ceftaroline
分子名称: Ceftaroline, bound form, Penicillin-binding protein 4, ...
著者Alexander, J.A.N, Strynadka, N.C.J.
登録日2016-11-11
公開日2018-05-16
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Structural and kinetic analysis of penicillin-binding protein 4 (PBP4)-mediated antibiotic resistance inStaphylococcus aureus.
J. Biol. Chem., 2018
5TW9
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BU of 5tw9 by Molmil
1.50 Angstrom Crystal Structure of C-terminal Fragment (residues 322-384) of Iron Uptake System Component EfeO from Yersinia pestis.
分子名称: 1,2-ETHANEDIOL, IODIDE ION, Iron uptake system component EfeO
著者Minasov, G, Shuvalova, L, Flores, K, Dubrovska, I, Grimshaw, S, Kwon, K, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2016-11-11
公開日2016-11-30
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献1.50 Angstrom Crystal Structure of C-terminal Fragment (residues 322-384) of Iron Uptake System Component EfeO from Yersinia pestis.
To Be Published
5TWA
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BU of 5twa by Molmil
Crystal structure of Geodia cydonium BHP2 in complex with Lubomirskia baicalensis Bak-2
分子名称: 1,2-ETHANEDIOL, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BAK-2 protein, ...
著者Caria, S, Hinds, M.G, Kvansakul, M.
登録日2016-11-12
公開日2017-01-25
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural insight into an evolutionarily ancient programmed cell death regulator - the crystal structure of marine sponge BHP2 bound to LB-Bak-2.
Cell Death Dis, 8, 2017
5TWB
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BU of 5twb by Molmil
Oxidoreductase IruO in the reduced form
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Ferredoxin--NADP reductase, GLYCEROL
著者Kobylarz, M.J, Heieis, G.A, Loutet, S.A, Murphy, M.E.P.
登録日2016-11-12
公開日2017-10-04
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.822 Å)
主引用文献Iron Uptake Oxidoreductase (IruO) Uses a Flavin Adenine Dinucleotide Semiquinone Intermediate for Iron-Siderophore Reduction.
ACS Chem. Biol., 12, 2017
5TWC
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BU of 5twc by Molmil
Oxidoreductase IruO in the oxidized form
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Ferredoxin--NADP reductase
著者Kobylarz, M.J, Heieis, G.A, Loutet, S.A, Murphy, M.E.P.
登録日2016-11-12
公開日2017-10-04
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Iron Uptake Oxidoreductase (IruO) Uses a Flavin Adenine Dinucleotide Semiquinone Intermediate for Iron-Siderophore Reduction.
ACS Chem. Biol., 12, 2017
5TWD
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BU of 5twd by Molmil
CTX-M-14 P167S apoenzyme
分子名称: Beta-lactamase
著者Patel, M, Stojanoski, V, Sankaran, B, Prasad, B.V.V, Palzkill, T.
登録日2016-11-12
公開日2017-06-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The Drug-Resistant Variant P167S Expands the Substrate Profile of CTX-M beta-Lactamases for Oxyimino-Cephalosporin Antibiotics by Enlarging the Active Site upon Acylation.
Biochemistry, 56, 2017

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件を2025-07-23に公開中

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