PDB: 31188 件ウェブページステータス検索Chemie searchBIRD

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4I6R	High Resolution Crystal Structure of the Wild-Type Restriction-Modification Controller Protein C.Esp1396I (Triclinic form) 分子名称: GLYCEROL, Regulatory protein, SULFATE ION 著者 Martin, R.N.A, McGeehan, J.E, Kneale, G.G. 登録日 2012-11-30 公開日 2013-11-13 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.38 Å) 主引用文献 Structural and Mutagenic Analysis of the RM Controller Protein C.Esp1396I. Plos One, 9, 2014
4IA8	Crystal Structure of a Y37A mutant of the Restriction-Modification Controller Protein C.Esp1396I 分子名称: Regulatory protein, SULFATE ION 著者 Martin, R.N.A, McGeehan, J.E, Kneale, G.G. 登録日 2012-12-06 公開日 2013-12-11 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Structural and Mutagenic Analysis of the RM Controller Protein C.Esp1396I. Plos One, 9, 2014
4J9H	Crystal structure of the ABL-SH3 domain complexed with the designed high-affinity peptide ligand P7 at pH 8 分子名称: P7, SULFATE ION, Tyrosine-protein kinase ABL1 著者 Camara-Artigas, A. 登録日 2013-02-16 公開日 2014-01-29 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Crystal structure of the ABL-SH3 domain complexed with the designed high-affinity peptide ligand P7 To be Published
4J75	Crystal Structure of a parasite tRNA synthetase, product-bound 分子名称: GLYCEROL, TRYPTOPHANYL-5'AMP, Tryptophanyl-tRNA synthetase 著者 Koh, C.Y, Kim, J.E, Verlinde, C.L.M.J, Hol, W.G.J. 登録日 2013-02-12 公開日 2013-05-22 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal structures of Plasmodium falciparum cytosolic tryptophanyl-tRNA synthetase and its potential as a target for structure-guided drug design. Mol.Biochem.Parasitol., 189, 2013
4J9G	Crystal structure of the ABL-SH3 domain complexed with the designed high-affinity peptide ligand P7 at pH7 分子名称: GLYCEROL, P7, SULFATE ION, ... 著者 Camara-Artigas, A. 登録日 2013-02-16 公開日 2014-01-29 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Crystal structure of the ABL-SH3 domain complexed with the designed high-affinity peptide ligand P7 To be Published
4I6T	Crystal Structure of a T36A mutant of the Restriction-Modification Controller Protein C.Esp1396I 分子名称: MALONATE ION, Regulatory protein 著者 Martin, R.N.A, McGeehan, J.E, Kneale, G.G. 登録日 2012-11-30 公開日 2013-11-13 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural and Mutagenic Analysis of the RM Controller Protein C.Esp1396I. Plos One, 9, 2014
7NWK	Crystal structure of CDK9-Cyclin T1 bound by compound 6 分子名称: Cyclin-T1, Cyclin-dependent kinase 9, N-((1R,3R)-3-(7-(4-fluoro-2-methoxyphenyl)-3H-imidazo[4,5-b]pyridin-2-yl)cyclopentyl)acetamide 著者 Collie, G.W, Ferguson, A.D. 登録日 2021-03-16 公開日 2021-10-27 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.81 Å) 主引用文献 Discovery of a Series of 7-Azaindoles as Potent and Highly Selective CDK9 Inhibitors for Transient Target Engagement. J.Med.Chem., 64, 2021
7T14	Hexameric SIVmac CA 分子名称: Capsid protein p24 著者 Jacques, D.A, James, L.C. 登録日 2021-12-01 公開日 2022-10-19 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Evasion of cGAS and TRIM5 defines pandemic HIV. Nat Microbiol, 7, 2022
7T31	X-ray Structure of Clostridiodies difficile PilW 分子名称: Maltose/maltodextrin-binding periplasmic protein,Putative pilin protein chimera 著者 Ronish, L.A, Piepenbrink, K.H. 登録日 2021-12-06 公開日 2022-10-19 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Recognition of extracellular DNA by type IV pili promotes biofilm formation by Clostridioides difficile. J.Biol.Chem., 298, 2022
7T99	Crystal structure of engineered CYS-CYS fab dimer CL-205 (LC25) 分子名称: FAB Heavy Chain, FAB Light Chain, PHOSPHATE ION 著者 Harris, S.F, Boenig, G.D.L. 登録日 2021-12-18 公開日 2022-10-12 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Antibody interfaces revealed through structural mining. Comput Struct Biotechnol J, 20, 2022
7SML	Crystal Structure of L-GALACTONO-1,4-LACTONE DEHYDROGENASE de Myrciaria dubia 分子名称: L-GALACTONO-1,4-LACTONE DEHYDROGENASE 著者 Santillan, J.A.V, Cabrejos, D.A.L, Pereira, H.M, Gomez, J.C.C, Garratt, R.C. 登録日 2021-10-26 公開日 2022-11-02 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural insights into the Smirnoff-Wheeler pathway for vitamin C production in the Amazon fruit Camu-Camu. J.Exp.Bot., 2024
7NS7	Human L-alanine:glyoxylate aminotransferase minor allele variant: AGXT-Mi (P11L-I340M) 分子名称: L-alanine:glyoxylate aminotransferase 著者 Cellini, B, Dindo, M. 登録日 2021-03-05 公開日 2022-03-23 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural dynamics shape the fitness window of alanine:glyoxylate aminotransferase. Protein Sci., 31, 2022
7OGN	Crystal structure of T2R-TTL -mebendazole complex 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ... 著者 Oliva, M.A, Bonato, F, Diaz, J.F. 登録日 2021-05-07 公開日 2022-04-06 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Effect of Clinically Used Microtubule Targeting Drugs on Viral Infection and Transport Function. Int J Mol Sci, 23, 2022
7O1E	Crystal structure of PCNA from Chaetomium thermophilum 分子名称: Proliferating cell nuclear antigen 著者 Alphey, M.A, MacNeill, S, Yang, D. 登録日 2021-03-29 公開日 2022-04-13 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.34 Å) 主引用文献 Non-canonical binding of the Chaetomium thermophilum PolD4 N-terminal PIP motif to PCNA involves Q-pocket and compact 2-fork plug interactions but no 3 10 helix. Febs J., 290, 2023
7O1F	PCNA from Chaetomium thermophilum in complex with PolD4 PIP peptide 分子名称: Peptide fragment from PolD4, Proliferating cell nuclear antigen, SODIUM ION 著者 Alphey, M.A, MacNeill, S, Yang, D. 登録日 2021-03-29 公開日 2022-04-13 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 Non-canonical binding of the Chaetomium thermophilum PolD4 N-terminal PIP motif to PCNA involves Q-pocket and compact 2-fork plug interactions but no 3 10 helix. Febs J., 290, 2023
7P3E	MHC I A02 Allele presenting YLQLRTFLL 分子名称: Beta-2-microglobulin, DI(HYDROXYETHYL)ETHER, IODIDE ION, ... 著者 Rizkallah, P.J, Sewell, A.K, Wall, A, Fuller, A. 登録日 2021-07-07 公開日 2021-07-28 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Emergence of immune escape at dominant SARS-CoV-2 killer T cell epitope. Cell, 185, 2022
8DBB	Crystal structure of DDT with the selective inhibitor 2,5-Pyridinedicarboxylic Acid 分子名称: CITRIC ACID, D-dopachrome decarboxylase, pyridine-2,5-dicarboxylic acid 著者 Parkins, A, Banumathi, S, Pantouris, G. 登録日 2022-06-14 公開日 2023-03-08 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 2,5-Pyridinedicarboxylic acid is a bioactive and highly selective inhibitor of D-dopachrome tautomerase. Structure, 31, 2023
7ONR	PARP1 catalytic domain in complex with 8-chloroquinazolinone-based inhibitor (compound 9) 分子名称: 8-chloranyl-2-[3-[4-(1,5-dimethylimidazol-2-yl)piperazin-1-yl]propyl]-3~{H}-quinazolin-4-one, Poly [ADP-ribose] polymerase 1, SULFATE ION 著者 Schimpl, M, Balazs, A, Barratt, D, Bista, M, Chuba, M, Degorce, S.L, Di Fruscia, P, Embrey, K, Ghosh, A, Gill, S, Gunnarsson, A, Hande, S, Hemsley, P, Illuzzi, G, Lane, J, Larner, C, Leo, E, Madin, A, Martin, S, McWilliams, L, Orme, J, Pachl, F, Packer, M, Pike, A, Staniszewska, A.D, Talbot, V, Underwood, E, Varnes, G.J, Zhang, A, Zheng, X, Johannes, J.W. 登録日 2021-05-25 公開日 2021-09-15 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Discovery of 5-{4-[(7-Ethyl-6-oxo-5,6-dihydro-1,5-naphthyridin-3-yl)methyl]piperazin-1-yl}- N -methylpyridine-2-carboxamide (AZD5305): A PARP1-DNA Trapper with High Selectivity for PARP1 over PARP2 and Other PARPs. J.Med.Chem., 64, 2021
7TTM	Crystal structure of potent neutralizing antibody 10-40 in complex with Sarbecovirus bat SHC014 receptor-binding domain 分子名称: 1040 heavy chain, 1040 light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Reddem, E.R, Shapiro, L. 登録日 2022-02-01 公開日 2022-04-27 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.24 Å) 主引用文献 An antibody class with a common CDRH3 motif broadly neutralizes sarbecoviruses. Sci Transl Med, 14, 2022
7P39	4,6-alpha-glucanotransferase GtfB from Limosilactobacillus reuteri NCC 2613 complexed with acarbose 分子名称: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose, CALCIUM ION, Dextransucrase, ... 著者 Pijning, T, te Poele, E, Gangoiti, J, Boerner, T, Dijkhuizen, L. 登録日 2021-07-07 公開日 2021-11-03 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Insights into Broad-Specificity Starch Modification from the Crystal Structure of Limosilactobacillus Reuteri NCC 2613 4,6-alpha-Glucanotransferase GtfB. J.Agric.Food Chem., 69, 2021
7P38	4,6-alpha-glucanotransferase GtfB from Limosilactobacillus reuteri NCC 2613 分子名称: CALCIUM ION, Dextransucrase, GLYCEROL, ... 著者 Pijning, T, te Poele, E, Gangoiti, J, Boerner, T, Dijkhuizen, L. 登録日 2021-07-07 公開日 2021-11-03 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Insights into Broad-Specificity Starch Modification from the Crystal Structure of Limosilactobacillus Reuteri NCC 2613 4,6-alpha-Glucanotransferase GtfB. J.Agric.Food Chem., 69, 2021
7OYF	Crystal structure of depupylase Dop in complex with Pup and ADP/trifluoromagnesate 分子名称: 1,2-ETHANEDIOL, ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, ... 著者 Cui, H. 登録日 2021-06-24 公開日 2021-12-01 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.88 Å) 主引用文献 Structures of prokaryotic ubiquitin-like protein Pup in complex with depupylase Dop reveal the mechanism of catalytic phosphate formation. Nat Commun, 12, 2021
7OYH	Crystal structure of depupylase Dop in complex with Pup and ADP/tetrafluoromagnesate 分子名称: 1,2-ETHANEDIOL, ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, ... 著者 Cui, H. 登録日 2021-06-24 公開日 2021-12-01 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Structures of prokaryotic ubiquitin-like protein Pup in complex with depupylase Dop reveal the mechanism of catalytic phosphate formation. Nat Commun, 12, 2021
7OY3	Crystal structure of depupylase Dop in complex with phosphorylated Pup and ADP 分子名称: 1,2-ETHANEDIOL, ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, ... 著者 Cui, H. 登録日 2021-06-23 公開日 2021-12-01 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.78 Å) 主引用文献 Structures of prokaryotic ubiquitin-like protein Pup in complex with depupylase Dop reveal the mechanism of catalytic phosphate formation. Nat Commun, 12, 2021
7OXY	Crystal structure of depupylase Dop in complex with Pup and AMP-PCP 分子名称: 1,2-ETHANEDIOL, ACETATE ION, DI(HYDROXYETHYL)ETHER, ... 著者 Cui, H. 登録日 2021-06-23 公開日 2021-12-01 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Structures of prokaryotic ubiquitin-like protein Pup in complex with depupylase Dop reveal the mechanism of catalytic phosphate formation. Nat Commun, 12, 2021

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