PDB: 1507 件ウェブページステータス検索Chemie searchBIRD

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3A9J	Crystal structure of the mouse TAB2-NZF in complex with Lys63-linked di-ubiquitin 分子名称: Mitogen-activated protein kinase kinase kinase 7-interacting protein 2, Ubiquitin, ZINC ION 著者 Sato, Y, Yoshikawa, A, Yamashita, M, Yamagata, A, Fukai, S. 登録日 2009-10-29 公開日 2009-12-08 最終更新日 2021-11-10 実験手法 X-RAY DIFFRACTION (1.18 Å) 主引用文献 Structural basis for specific recognition of Lys 63-linked polyubiquitin chains by NZF domains of TAB2 and TAB3 Embo J., 28, 2009
3A9K	Crystal structure of the mouse TAB3-NZF in complex with Lys63-linked di-ubiquitin 分子名称: Mitogen-activated protein kinase kinase kinase 7-interacting protein 3, Ubiquitin, ZINC ION 著者 Sato, Y, Yoshikawa, A, Yamashita, M, Yamagata, A, Fukai, S. 登録日 2009-10-29 公開日 2009-12-08 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Structural basis for specific recognition of Lys 63-linked polyubiquitin chains by NZF domains of TAB2 and TAB3 Embo J., 28, 2009
3K9O	The crystal structure of E2-25K and UBB+1 complex 分子名称: Ubiquitin, Ubiquitin-conjugating enzyme E2 K 著者 Kang, G.B, Ko, S, Song, S.M, Lee, W, Eom, S.H. 登録日 2009-10-16 公開日 2010-09-08 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural Basis of E2-25K/UBB+1 Interaction for Neurotoxicity of Alzheimer Disease by Proteasome Inhibition To be Published
3K9P	The crystal structure of E2-25K and ubiquitin complex 分子名称: Ubiquitin, Ubiquitin-conjugating enzyme E2 K 著者 Kang, G.B, Ko, S, Song, S.M, Lee, W, Eom, S.H. 登録日 2009-10-16 公開日 2010-09-08 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural basis of E2-25K/UBB+1 interaction leading to proteasome inhibition and neurotoxicity J.Biol.Chem., 285, 2010
2KOX	NMR residual dipolar couplings identify long range correlated motions in the backbone of the protein ubiquitin 分子名称: Ubiquitin 著者 Fenwick, R.B, Richter, B, Lee, D, Walter, K.F.A, Milovanovic, D, Becker, S, Lakomek, N.A, Griesinger, C, Salvatella, X. 登録日 2009-10-02 公開日 2011-06-08 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Weak Long-Range Correlated Motions in a Surface Patch of Ubiquitin Involved in Molecular Recognition J.Am.Chem.Soc., 2011
3JW0	E2~Ubiquitin-HECT 分子名称: E3 ubiquitin-protein ligase NEDD4-like, Ubiquitin, Ubiquitin-conjugating enzyme E2 D2 著者 Kamadurai, H.B, Schulman, B.A. 登録日 2009-09-17 公開日 2010-01-12 最終更新日 2021-10-13 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Insights into ubiquitin transfer cascades from a structure of a UbcH5B approximately ubiquitin-HECT(NEDD4L) complex. Mol.Cell, 36, 2009
3JVZ	E2~Ubiquitin-HECT 分子名称: E3 ubiquitin-protein ligase NEDD4-like, Ubiquitin, Ubiquitin-conjugating enzyme E2 D2 著者 Souphron, J, Kamadurai, H.B, Schulman, B.A. 登録日 2009-09-17 公開日 2010-01-12 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Insights into ubiquitin transfer cascades from a structure of a UbcH5B approximately ubiquitin-HECT(NEDD4L) complex. Mol.Cell, 36, 2009
3JSV	Crystal structure of mouse NEMO CoZi in complex with Lys63-linked di-ubiquitin 分子名称: NF-kappa-B essential modulator, Ubiquitin 著者 Yoshikawa, A, Sato, Y, Mimura, H, Yamashita, M, Yamagata, A, Fukai, S. 登録日 2009-09-11 公開日 2009-10-27 最終更新日 2021-11-10 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Crystal structure of the NEMO ubiquitin-binding domain in complex with Lys 63-linked di-ubiquitin Febs Lett., 583, 2009
2KO3	Nedd8 solution structure 分子名称: NEDD8 著者 Choi, Y.S, Jeon, Y.H, Cheong, C. 登録日 2009-09-09 公開日 2009-11-03 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 60th residues of ubiquitin and Nedd8 are located out of E2-binding surfaces, but are important for K48 ubiquitin-linkage. Febs Lett., 583, 2009
2KNB	Solution NMR structure of the parkin Ubl domain in complex with the endophilin-A1 SH3 domain 分子名称: E3 ubiquitin-protein ligase parkin, Endophilin-A1 著者 Trempe, J, Guennadi, K, Edna, C.M, Kalle, G. 登録日 2009-08-20 公開日 2009-12-22 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 SH3 domains from a subset of BAR proteins define a Ubl-binding domain and implicate parkin in synaptic ubiquitination. Mol.Cell, 36, 2009
2KN5	A Correspondence Between Solution-State Dynamics of an Individual Protein and the Sequence and Conformational Diversity of its Family 分子名称: Ubiquitin 著者 Friedland, G.D. 登録日 2009-08-14 公開日 2009-11-17 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 A correspondence between solution-state dynamics of an individual protein and the sequence and conformational diversity of its family. PLOS COMPUT.BIOL., 5, 2009
3IHP	Covalent Ubiquitin-Usp5 Complex 分子名称: CHLORIDE ION, ETHANAMINE, Ubiquitin, ... 著者 Walker, J.R, Avvakumov, G.V, Xue, S, Butler-Cole, C, Weigelt, J, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC) 登録日 2009-07-30 公開日 2009-12-29 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Covalent Ubiquitin-Usp5 Complex To be Published
3IFW	Crystal structure of the S18Y variant of ubiquitin carboxy terminal hydrolase L1 bound to ubiquitin vinylmethylester. 分子名称: METHYL 4-AMINOBUTANOATE, Ubiquitin, Ubiquitin carboxyl-terminal hydrolase isozyme L1 著者 Das, C, Boudreaux, D, Maiti, T. 登録日 2009-07-26 公開日 2010-06-16 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Ubiquitin vinyl methyl ester binding orients the misaligned active site of the ubiquitin hydrolase UCHL1 into productive conformation. Proc.Natl.Acad.Sci.USA, 107, 2010
2KLG	PERE NMR structure of ubiquitin 分子名称: Ubiquitin 著者 Madl, T, Bermel, W, Zangger, K. 登録日 2009-07-02 公開日 2009-10-06 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Use of Relaxation Enhancements in a Paramagnetic Environment for the Structure Determination of Proteins Using NMR Spectroscopy Angew.Chem.Int.Ed.Engl., 48, 2009
2KLC	NMR solution structure of human ubiquitin-like domain of ubiquilin 1, Northeast Structural Genomics Consortium (NESG) target HT5A 分子名称: Ubiquilin-1 著者 Doherty, R.S, Dhe-Paganon, S, Fares, C, Lemak, S, Gutmanas, A, Garcia, M, Yee, A, Montelione, G.T, Arrowsmith, C.H, Northeast Structural Genomics Consortium (NESG), Structural Genomics Consortium (SGC), Ontario Centre for Structural Proteomics (OCSP) 登録日 2009-06-30 公開日 2009-07-14 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Solution structure of ubiquitin-like domain of ubiquilin 1 To be Published
3I3T	Crystal structure of covalent ubiquitin-USP21 complex 分子名称: ETHANAMINE, Ubiquitin, Ubiquitin carboxyl-terminal hydrolase 21, ... 著者 Neculai, D, Avvakumov, G.V, Walker, J.R, Xue, S, Butler-Cole, C, Weigelt, J, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC) 登録日 2009-06-30 公開日 2009-07-21 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.59 Å) 主引用文献 A strategy for modulation of enzymes in the ubiquitin system. Science, 339, 2013
2KK8	NMR Solution Structure of a Putative Uncharacterized Protein obtained from Arabidopsis thaliana: Northeast Structural Genomics Consortium target AR3449A 分子名称: Uncharacterized protein AT4g05270 著者 Mani, R, Gurla, S.V.T, Shastry, R, Ciccosanti, C, Foote, E, Jiang, M, Xiao, R, Nair, R, Everett, J, Huang, Y, Acton, T, Rost, B, Montelione, G.T, Northeast Structural Genomics Consortium (NESG) 登録日 2009-06-16 公開日 2009-06-30 最終更新日 2024-05-08 実験手法 SOLUTION NMR 主引用文献 NMR Solution Structure of a Putative Uncharacterized Protein obtained from Arabidopsis thaliana: Northeast Structural Genomics Consortium Target AR3449A To be Published
3A33	UbcH5b~Ubiquitin Conjugate 分子名称: GLYCEROL, Ubiquitin, Ubiquitin-conjugating enzyme E2 D2 著者 Sakata, E, Satoh, T, Yamamoto, S, Yamaguchi, Y, Yagi-Utsumi, M, Kurimoto, E, Wakatsuki, S, Kato, K. 登録日 2009-06-08 公開日 2009-11-24 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal Structure of UbcH5b~Ubiquitin Intermediate: Insight into the Formation of the Self-Assembled E2~Ub Conjugates Structure, 18, 2010
2KJH	NMR based structural model of the UBCH8-UBIQUITIN complex 分子名称: Ubiquitin, Ubiquitin/ISG15-conjugating enzyme E2 L6 著者 Serniwka, S.A, Shaw, G.S. 登録日 2009-05-28 公開日 2009-12-08 最終更新日 2021-10-13 実験手法 SOLUTION NMR 主引用文献 The structure of the UbcH8-ubiquitin complex shows a unique ubiquitin interaction site. Biochemistry, 48, 2009
3HM3	The Structure and conformation of Lys-63 linked tetra-ubiquitin 分子名称: Ubiquitin, ZINC ION 著者 Datta, A.B, Hura, G.L, Wolberger, C. 登録日 2009-05-28 公開日 2009-08-25 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.96 Å) 主引用文献 The structure and conformation of Lys63-linked tetraubiquitin. J.Mol.Biol., 392, 2009
3H7P	Crystal structure of K63-linked di-ubiquitin 分子名称: CADMIUM ION, Ubiquitin 著者 Weeks, S.D, Grasty, K.C, Hernandez-Cuebas, L, Loll, P.J. 登録日 2009-04-28 公開日 2009-09-22 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structures of Lys-63-linked tri- and di-ubiquitin reveal a highly extended chain architecture. Proteins, 77, 2009
3H7S	Crystal structures of K63-linked di- and tri-ubiquitin reveal a highly extended chain architecture 分子名称: Ubiquitin, ZINC ION 著者 Weeks, S.D, Grasty, K.C, Hernandez-Cuebas, L, Loll, P.J. 登録日 2009-04-28 公開日 2009-09-22 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structures of Lys-63-linked tri- and di-ubiquitin reveal a highly extended chain architecture. Proteins, 77, 2009
3A1Q	Crystal structure of the mouse RAP80 UIMs in complex with Lys63-linked di-ubiquitin 分子名称: Ubiquitin, Ubiquitin interaction motif-containing protein 1 著者 Sato, Y, Yoshikawa, A, Mimura, H, Yamashita, M, Yamagata, A, Fukai, S. 登録日 2009-04-21 公開日 2009-07-21 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural basis for specific recognition of Lys 63-linked polyubiquitin chains by tandem UIMs of RAP80 Embo J., 28, 2009
3H1U	Structure of ubiquitin in complex with Cd ions 分子名称: CADMIUM ION, Ubiquitin 著者 Qureshi, I.A, Ferron, F, Cheung, P, Lescar, J. 登録日 2009-04-14 公開日 2009-05-05 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Crystallographic structure of ubiquitin in complex with cadmium ions BMC RES NOTES, 2, 2009
2KHW	Solution Structure of the human Polymerase iota UBM2-Ubiquitin Complex 分子名称: Immunoglobulin G-binding protein G, DNA polymerase iota, Ubiquitin 著者 Bomar, M.G, D'Souza, S, Bienko, M, Dikic, I, Walker, G. 登録日 2009-04-13 公開日 2010-02-23 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution Structure of the human Polymerase iota UBM2-Ubiquitin Complex To be Published

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